Gene Avin_27970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_27970 
Symbol 
ID7761702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2877718 
End bp2879445 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content68% 
IMG OID643805676 
Productchemotaxis sensory transducer 
Protein accessionYP_002799944 
Protein GI226944871 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0997024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGGGTT TTTTGCTTAA TCTGAGCATC AGGACGGTGG TCACCGCCAC CCTGGGCTGT 
TTCGCCTTGC TGCTGGTCAT CGTCGCCGGC CTGGGCTATG GGGGGACCAG GCTGGGCGAT
CAGGCACTCG CCGACCGGAC ACGGACAGCG ACCCGGATCG ACCTGTTGCG TCAGGCCGAT
GGCTTGCGCC TGAGAGCCTT CTCGCGACTG GAAGCCTTCG GCAAGATGAG TCTTGCCCAT
CAGGTCCCTC TCGCGGAGCG GCAGCAGCAA CAGGCCGATA TCCAGGAGCG GATCGCTCAG
GCCAACAACA TTCTGGCGGA CGTCCAGGCC ATGCCGCCGT TCGCCAAGGA GGACGGACGC
AAGCTGCTGG ATAAGGCGGC AGCGAGTCTG GCCGAGTCGC TCGATTCTCT CGATCAACAG
TTGCAGGCTT GGGCGAAGCT CGACACCGAA ACCTTCGACC GCTTCGAAGA CGACATGATG
TTCAAGCGTG GCCCGCAGAT CGCCAAGGAT TTGGCGGACA CCATGATCTA CCTGGAGGCC
CATGGTCATG CTCAGATGTC CGAGTACCAC GCCAGCCTCA TCACCTTCGC CATCATCGGC
GGCGCCTCCC TGGCCGTCGC CTTGTTCCTG ATGCTGGCCC TGCGGATGAT GCTGATGGGC
TTCGTGGTCC GTCCGGTGCA CGAGGCGGTG GAGCACGTGC AGCGCCTGGC CCGCGCCGAC
CTGTCGCAGT CGATCCCGGT GACCTCGCGT AACGAGATCG GCCGGTTGCT CGGCGCGCTG
CGCGAGATGC AGGAAAGCCT GGTGCGAATC GTCACCAGCG TGCGCGCCGG CAGCGGCTCG
ATCCTGGTCG GCGCGCAACA GATCGCCAGC GGCAACGCCG ACCTGTCCTC GCGCACCGAA
CAGCAGGCCG CCTCGCTGGA GGAAACCGCG GCGAGCATGG AAGAGCTGAC CGCGACGGTG
AAGCAGAACG CCGACAACGC CCGCCAGGCC AGCGCGCTGG CCAACGACGC CTCGGGCACC
GCCGGACAGG GCCGCGAGGT GGTCGGCCGG GTGGTGGAGA CGATGCGCGA GATCAGCGAC
AGCTCGGCGC AGATCGCCAA GATCGTCGGA GTCATCGACT CGATCGCCTT CCAGACCAAC
ATCCTGGCGC TGAACGCCTC GGTGGAGGCG GCGCGCGCCG GCGAGCAGGG TCGCGGCTTC
GCGGTGGTGG CCGGCGAGGT GCGCAACCTG GCCGGCCGTT CGGCGGAGGC GGCGCGGGAG
ATCAAGGCGC TGATCGAGGC CTCCAGCAAG CGGGTCGGCG ACGGCTCGCA ACTGGTCGAG
CAGGCCGGAC GGACCATGGA AGAGGTGGTG AAGGCGGTGC ACCGGGTGAC CGACATCATC
GACGAGATCT CGGCAGCTTC GCACGAACAG AGCGAGGGGA TCGCCCAGGT GAACACGGCG
GTCGCGCAGA TGGACGAGGT GACCCAGCAG AACGCGGCGC TGGTGCAGGA GGCGTCGGCG
GCCTCGGCCT CGCTGGCCGG GCAGGCGCGG CACCTGGAGG AGGCGGTGGC GGTGTTCCGC
CTGGGCGCGG AGCAGCGGCG TTCGGCGGAG CAGAAGCACG GCGAGTCGCT GTCGGCGACC
CGGTCGCCGA CGCAGGCCCG TCCGGCGGCA CGGCCGAAGG CGCTGTCGGA AAAGGCGCAT
GCCCAGCCGG CCACGGCCGT CGCCGAGGAG CAGTGGGAGG AGTTCTGA
 
Protein sequence
MVGFLLNLSI RTVVTATLGC FALLLVIVAG LGYGGTRLGD QALADRTRTA TRIDLLRQAD 
GLRLRAFSRL EAFGKMSLAH QVPLAERQQQ QADIQERIAQ ANNILADVQA MPPFAKEDGR
KLLDKAAASL AESLDSLDQQ LQAWAKLDTE TFDRFEDDMM FKRGPQIAKD LADTMIYLEA
HGHAQMSEYH ASLITFAIIG GASLAVALFL MLALRMMLMG FVVRPVHEAV EHVQRLARAD
LSQSIPVTSR NEIGRLLGAL REMQESLVRI VTSVRAGSGS ILVGAQQIAS GNADLSSRTE
QQAASLEETA ASMEELTATV KQNADNARQA SALANDASGT AGQGREVVGR VVETMREISD
SSAQIAKIVG VIDSIAFQTN ILALNASVEA ARAGEQGRGF AVVAGEVRNL AGRSAEAARE
IKALIEASSK RVGDGSQLVE QAGRTMEEVV KAVHRVTDII DEISAASHEQ SEGIAQVNTA
VAQMDEVTQQ NAALVQEASA ASASLAGQAR HLEEAVAVFR LGAEQRRSAE QKHGESLSAT
RSPTQARPAA RPKALSEKAH AQPATAVAEE QWEEF