Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5887 |
Symbol | |
ID | 6182470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 420683 |
End bp | 422242 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641689018 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001815877 |
Protein GI | 172065165 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.330697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGATC TGAAGGTAAA AAACAGTTTG CTCGCCGTGC TGGCCACGTT TGCAGCGATG ATCATCGTCG GCGGCATCGT CGGGGTCGTT GCGCTCGGCA GCGCGAACAC GAATGCGAAG CGCCTGCACG CAATCGCAAC GCAGACGTCG CTCGTCAACG ATGCGTACAA GGACAGCACG CGTACCCGCT CGGCGCTCGT ACGTGCGTAT TCGGCACTGA AGGAACACAA CGACCCGGCG CAGCGCGACT CGGCCTTGCA AAGCGCGCAG CGCACGTTCG ATCTGTCGGC GAAGGAAACG CAGGCGTTCA AGGACACCGC GCCGATCGGC AGCCTCGGTG CCGACCTGAA GCAGGCGCTG GTCGAATCGT CGACGCATCT CGCGAGCGTC CTCGCCCGCG CGAGTGACGC GCTGCGCAAC GGCGATACCG CCGCGTATGC CGAGATCAAC GACAAGGAAA TCACGCTCGC CGGCCAGGTG TATTCGGCGA ACGTCGAGAA ATTCCAGCGC ACGGCCAACC AGCTGGCGGA AGACACGATC GACGACGACA ATGCCGCGTA CACGCGCATC GTCGCGATGG TCGGCATCGG TGTCGCGCTG GCGCTCGCGC TGATCGCCGC GACGCACTTC GCGTTGCGCG CGATCGTGTC GCGGCCGCTC GCGAACGCGG CCGCGCTGCT CGACCGGATC GCGTCGAACG ACCTGACCGT GAACGTGCCC GATGCCGGCC GCAACGAAAT CGGCCAGTTG TTCGCGGCGA TGAAGCGGAT GCAGACCGGC CTCGCGACGA CGGTCACCGG CATGCGCGAC AGCAGCGACG CGATCCACAC GGCCGCGCGC GAGATCGCCG CGGGCAACCT CGACCTGTCG AGCCGCACTG AACAGCAGTC GGCATCGCTC GAGGAGACGG CCGCGAGCAT GGAGCAGCTG ACGTCGACGG TACGCCAGAA CGCGGACAAC GCGCAGCAGG CGAGCACGCT CGCCGCGAGC GCGGCGGACC TCGCCCAGCA GGGCGGCGAA CTGGTCGGCC GCGCGGTCGA CATGATGGGC GTGATCAACA CGAGCTCGCA GAAGATCGCG GAGATCACCG CGATGATCGA CGGCATCGCG TTCCAGACCA ACATCCTCGC GCTCAACGCG GCGGTCGAAT CGGCACGTGC GGGCGAGCAC GGGCGCGGCT TCGCGGTGGT CGCGGGCGAG GTGCGCACGC TGGCCCAGCG CAGCGCGGGC GCCGCGCGCG AGATCCGGCA GCTGATCGGC GCGTCGATCG ACGACGTGCG CGACGGCAAT GCGCTCGTGT CGCAGGCCGG GCGCGCGATG GACGAGATCG TGTCGTCGGT GCGGCGCGTG GCGACGATCA TGACCGAGAT CACGACGGCC ACCGTCGAGC AGAGCGCGGG GATCGACCAG GTCGGCCAGG CGGTCACGCA GATGGACCAG ATGACGCAGC AGAACGCGGC GCTCGTCGAA CAGGCAAGTG CCGCCGCGAG CGCGCTCGAG CAGCAGGCCG GTTCGATGCA GGCCGCGATG TCGGTGTTCC GGATTGCGCG GGCGTGCTGA
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Protein sequence | MRDLKVKNSL LAVLATFAAM IIVGGIVGVV ALGSANTNAK RLHAIATQTS LVNDAYKDST RTRSALVRAY SALKEHNDPA QRDSALQSAQ RTFDLSAKET QAFKDTAPIG SLGADLKQAL VESSTHLASV LARASDALRN GDTAAYAEIN DKEITLAGQV YSANVEKFQR TANQLAEDTI DDDNAAYTRI VAMVGIGVAL ALALIAATHF ALRAIVSRPL ANAAALLDRI ASNDLTVNVP DAGRNEIGQL FAAMKRMQTG LATTVTGMRD SSDAIHTAAR EIAAGNLDLS SRTEQQSASL EETAASMEQL TSTVRQNADN AQQASTLAAS AADLAQQGGE LVGRAVDMMG VINTSSQKIA EITAMIDGIA FQTNILALNA AVESARAGEH GRGFAVVAGE VRTLAQRSAG AAREIRQLIG ASIDDVRDGN ALVSQAGRAM DEIVSSVRRV ATIMTEITTA TVEQSAGIDQ VGQAVTQMDQ MTQQNAALVE QASAAASALE QQAGSMQAAM SVFRIARAC
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