More than 300 homologs were found in PanDaTox collection
for query gene BamMC406_5887 on replicon NC_010557
Organism: Burkholderia ambifaria MC40-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010625  Bphy_5591  methyl-accepting chemotaxis sensory transducer  67.18 
 
 
519 aa  638    Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_6127  methyl-accepting chemotaxis sensory transducer  99.03 
 
 
519 aa  1005    Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0128017 
 
 
-
 
NC_010557  BamMC406_5887  methyl-accepting chemotaxis sensory transducer  100 
 
 
519 aa  1022    Burkholderia ambifaria MC40-6  Bacteria  normal  0.330697  normal 
 
 
-
 
NC_010682  Rpic_0996  methyl-accepting chemotaxis sensory transducer  52.52 
 
 
601 aa  461  9.999999999999999e-129  Ralstonia pickettii 12J  Bacteria  normal  0.947036  normal  0.198959 
 
 
-
 
NC_012856  Rpic12D_1092  methyl-accepting chemotaxis sensory transducer  53.1 
 
 
605 aa  449  1e-125  Ralstonia pickettii 12D  Bacteria  normal  normal  0.703119 
 
 
-
 
NC_007974  Rmet_4195  methyl-accepting chemotaxis sensory transducer  50.19 
 
 
515 aa  443  1e-123  Cupriavidus metallidurans CH34  Bacteria  normal  0.766107  normal 
 
 
-
 
NC_003295  RSc1156  methyl-accepting chemotaxis transducer transmembrane protein  53.59 
 
 
600 aa  424  1e-117  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.579054 
 
 
-
 
NC_010681  Bphyt_3813  methyl-accepting chemotaxis sensory transducer  44.53 
 
 
617 aa  365  2e-99  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A0121  methyl-accepting chemotaxis sensory transducer  45.04 
 
 
618 aa  362  1e-98  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.487659 
 
 
-
 
NC_011083  SeHA_C3889  methyl-accepting chemotaxis protein I  43.58 
 
 
547 aa  353  5.9999999999999994e-96  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3779  methyl-accepting chemotaxis protein  43.4 
 
 
547 aa  352  1e-95  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A3846  methyl-accepting chemotaxis protein I  43.4 
 
 
547 aa  350  3e-95  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A3769  methyl-accepting chemotaxis protein I  43.4 
 
 
547 aa  350  4e-95  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A3949  methyl-accepting chemotaxis protein I  43.02 
 
 
547 aa  347  3e-94  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.748503  normal 
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  43.82 
 
 
557 aa  347  4e-94  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  43.82 
 
 
557 aa  347  4e-94  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  43.63 
 
 
557 aa  345  1e-93  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  53.43 
 
 
566 aa  344  2e-93  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_008390  Bamb_0171  methyl-accepting chemotaxis sensory transducer  44.49 
 
 
648 aa  344  2.9999999999999997e-93  Burkholderia ambifaria AMMD  Bacteria  normal  0.451768  n/a   
 
 
-
 
NC_010551  BamMC406_0184  methyl-accepting chemotaxis sensory transducer  44.9 
 
 
648 aa  340  2.9999999999999998e-92  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A3360  methyl-accepting chemotaxis sensory transducer  44.58 
 
 
655 aa  340  4e-92  Burkholderia sp. 383  Bacteria  normal  0.139099  normal 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  42.94 
 
 
562 aa  337  3.9999999999999995e-91  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_010622  Bphy_2972  methyl-accepting chemotaxis sensory transducer  46.45 
 
 
597 aa  335  1e-90  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.00113075 
 
 
-
 
NC_010159  YpAngola_A3517  methyl-accepting chemotaxis protein  43.85 
 
 
536 aa  335  1e-90  Yersinia pestis Angola  Bacteria  normal  normal  0.549342 
 
 
-
 
NC_009708  YpsIP31758_1643  methyl-accepting chemotaxis protein  43.85 
 
 
536 aa  335  1e-90  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_04232  methyl-accepting chemotaxis protein I, serine sensor receptor  45.68 
 
 
551 aa  332  1e-89  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_04198  hypothetical protein  45.68 
 
 
551 aa  332  1e-89  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  44.3 
 
 
513 aa  332  1e-89  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
CP001637  EcDH1_3642  methyl-accepting chemotaxis sensory transducer  45.68 
 
 
551 aa  331  2e-89  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_5868  methyl-accepting chemotaxis protein I  45.68 
 
 
554 aa  331  2e-89  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_3700  methyl-accepting chemotaxis sensory transducer  45.68 
 
 
554 aa  331  2e-89  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.125609 
 
 
-
 
NC_009800  EcHS_A4586  methyl-accepting chemotaxis protein I  45.68 
 
 
557 aa  331  2e-89  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_4947  methyl-accepting chemotaxis protein I  45.68 
 
 
554 aa  331  2e-89  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  40.27 
 
 
552 aa  331  2e-89  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_010498  EcSMS35_4900  methyl-accepting chemotaxis protein I  45.68 
 
 
554 aa  331  2e-89  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.979291 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  57.72 
 
 
542 aa  330  3e-89  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3580  methyl-accepting chemotaxis sensory transducer  57.55 
 
 
572 aa  330  5.0000000000000004e-89  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_0463  methyl-accepting chemotaxis sensory transducer  44.29 
 
 
517 aa  330  5.0000000000000004e-89  Serratia proteamaculans 568  Bacteria  hitchhiker  0.000944533  normal  0.933191 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  58.23 
 
 
559 aa  328  1.0000000000000001e-88  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_007434  BURPS1710b_0074  methyl-accepting chemotaxis protein I  45.8 
 
 
673 aa  328  1.0000000000000001e-88  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  41.94 
 
 
567 aa  328  1.0000000000000001e-88  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2982  methyl-accepting chemotaxis sensory transducer  58.5 
 
 
541 aa  328  1.0000000000000001e-88  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_1857  methyl-accepting chemotaxis sensory transducer  52.85 
 
 
561 aa  328  1.0000000000000001e-88  Pectobacterium wasabiae WPP163  Bacteria  normal  0.769355  n/a   
 
 
-
 
NC_010084  Bmul_0167  methyl-accepting chemotaxis sensory transducer  45.9 
 
 
659 aa  328  2.0000000000000001e-88  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.677561 
 
 
-
 
NC_006348  BMA2857  methyl-accepting chemotaxis protein, putative  45.8 
 
 
673 aa  328  2.0000000000000001e-88  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_3118  putative methyl-accepting chemotaxis protein  45.8 
 
 
673 aa  328  2.0000000000000001e-88  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0285227  n/a   
 
 
-
 
NC_010658  SbBS512_E4893  methyl-accepting chemotaxis protein I  45.49 
 
 
551 aa  328  2.0000000000000001e-88  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3934  methyl-accepting chemotaxis protein  45.61 
 
 
673 aa  327  2.0000000000000001e-88  Burkholderia pseudomallei 1106a  Bacteria  normal  0.3175  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3433  putative methyl-accepting chemotaxis protein  45.8 
 
 
673 aa  328  2.0000000000000001e-88  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1686  putative methyl-accepting chemotaxis protein  45.8 
 
 
673 aa  328  2.0000000000000001e-88  Burkholderia mallei NCTC 10229  Bacteria  normal  0.303273  n/a   
 
 
-
 
NC_010498  EcSMS35_1753  methyl-accepting chemotaxis protein III  55.33 
 
 
546 aa  327  3e-88  Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  2.79367e-17 
 
 
-
 
NC_009074  BURPS668_3853  methyl-accepting chemotaxis protein II  45.61 
 
 
671 aa  326  5e-88  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2937  methyl-accepting chemotaxis sensory transducer  41.56 
 
 
564 aa  326  6e-88  Dickeya zeae Ech1591  Bacteria  normal  0.0948744  n/a   
 
 
-
 
NC_007952  Bxe_B2952  methyl-accepting chemotaxis sensory transducer  43.56 
 
 
540 aa  326  6e-88  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4174  methyl-accepting chemotaxis sensory transducer  44.64 
 
 
522 aa  325  1e-87  Ralstonia pickettii 12J  Bacteria  normal  0.0753508  normal 
 
 
-
 
NC_012857  Rpic12D_4286  methyl-accepting chemotaxis sensory transducer  44.64 
 
 
522 aa  325  1e-87  Ralstonia pickettii 12D  Bacteria  normal  0.246906  normal  0.38481 
 
 
-
 
NC_012912  Dd1591_1804  methyl-accepting chemotaxis sensory transducer  52.3 
 
 
562 aa  325  1e-87  Dickeya zeae Ech1591  Bacteria  normal  0.0522685  n/a   
 
 
-
 
NC_010508  Bcenmc03_0240  methyl-accepting chemotaxis sensory transducer  44.07 
 
 
657 aa  325  1e-87  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0244017  normal 
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  55.08 
 
 
661 aa  325  1e-87  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2108  methyl-accepting chemotaxis sensory transducer  45.11 
 
 
556 aa  325  1e-87  Dickeya dadantii Ech703  Bacteria  normal  0.0190315  n/a   
 
 
-
 
NC_008752  Aave_0831  methyl-accepting chemotaxis sensory transducer  56.92 
 
 
561 aa  325  1e-87  Acidovorax citrulli AAC00-1  Bacteria  normal  0.236088  normal  0.180731 
 
 
-
 
NC_009436  Ent638_2457  methyl-accepting chemotaxis sensory transducer  43.49 
 
 
555 aa  325  1e-87  Enterobacter sp. 638  Bacteria  normal  0.890786  normal 
 
 
-
 
CP001509  ECD_01378  methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor  55.04 
 
 
546 aa  324  2e-87  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2225  methyl-accepting chemotaxis sensory transducer  55.04 
 
 
546 aa  324  2e-87  Escherichia coli DH1  Bacteria  normal  0.213228  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  57.4 
 
 
572 aa  325  2e-87  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_010681  Bphyt_2259  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
588 aa  324  2e-87  Burkholderia phytofirmans PsJN  Bacteria  normal  0.131825  normal  0.497854 
 
 
-
 
NC_012892  B21_01390  hypothetical protein  55.04 
 
 
546 aa  324  2e-87  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_1600  methyl-accepting chemotaxis protein III  55.04 
 
 
546 aa  324  2e-87  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2609  methyl-accepting chemotaxis sensory transducer  53.87 
 
 
561 aa  324  3e-87  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  51.62 
 
 
580 aa  323  3e-87  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2849  methyl-accepting chemotaxis sensory transducer  43.88 
 
 
659 aa  323  4e-87  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0258  methyl-accepting chemotaxis sensory transducer  43.88 
 
 
659 aa  323  4e-87  Burkholderia cenocepacia HI2424  Bacteria  decreased coverage  0.00414638  n/a   
 
 
-
 
NC_010676  Bphyt_6908  methyl-accepting chemotaxis sensory transducer  42.91 
 
 
540 aa  323  5e-87  Burkholderia phytofirmans PsJN  Bacteria  normal  0.740725  normal  0.573307 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  55.31 
 
 
583 aa  323  5e-87  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_009832  Spro_2983  methyl-accepting chemotaxis sensory transducer  55.1 
 
 
556 aa  323  6e-87  Serratia proteamaculans 568  Bacteria  normal  0.96835  normal 
 
 
-
 
NC_007348  Reut_B5597  methyl-accepting chemotaxis sensory transducer  43.05 
 
 
570 aa  322  9.000000000000001e-87  Ralstonia eutropha JMP134  Bacteria  normal  0.253624  n/a   
 
 
-
 
NC_012917  PC1_3443  methyl-accepting chemotaxis sensory transducer  56.75 
 
 
511 aa  322  9.999999999999999e-87  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.330959  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  52.02 
 
 
578 aa  322  9.999999999999999e-87  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  44.61 
 
 
559 aa  321  1.9999999999999998e-86  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_2026  methyl-accepting chemotaxis protein III  54.76 
 
 
470 aa  321  1.9999999999999998e-86  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  hitchhiker  0.000000214401 
 
 
-
 
NC_007651  BTH_I3180  methyl-accepting chemotaxis protein, putative  45.04 
 
 
666 aa  321  1.9999999999999998e-86  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  48.79 
 
 
552 aa  321  1.9999999999999998e-86  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A1503  methyl-accepting chemotaxis protein III  54.47 
 
 
546 aa  320  3e-86  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1208  methyl-accepting chemotaxis sensory transducer  55.62 
 
 
555 aa  320  3e-86  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000392698  n/a   
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  50.92 
 
 
584 aa  320  3e-86  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_2238  methyl-accepting chemotaxis sensory transducer  54.47 
 
 
546 aa  320  3.9999999999999996e-86  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_1298  methyl-accepting chemotaxis protein II  42.2 
 
 
553 aa  320  5e-86  Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  0.00038087 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  50.78 
 
 
569 aa  320  5e-86  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  53.63 
 
 
584 aa  319  6e-86  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  56.87 
 
 
527 aa  319  7e-86  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  54.52 
 
 
585 aa  319  7.999999999999999e-86  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_009436  Ent638_0513  methyl-accepting chemotaxis sensory transducer  44.63 
 
 
586 aa  319  1e-85  Enterobacter sp. 638  Bacteria  normal  hitchhiker  0.00498581 
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  51.83 
 
 
532 aa  318  2e-85  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_012917  PC1_3679  methyl-accepting chemotaxis sensory transducer  56.25 
 
 
567 aa  318  2e-85  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3123  methyl-accepting chemotaxis sensory transducer  55.62 
 
 
555 aa  318  2e-85  Pectobacterium wasabiae WPP163  Bacteria  decreased coverage  0.000142041  n/a   
 
 
-
 
NC_011205  SeD_A4946  methyl-accepting chemotaxis protein I  53.59 
 
 
553 aa  317  2e-85  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.556415 
 
 
-
 
NC_011083  SeHA_C4939  methyl-accepting chemotaxis protein I  53.59 
 
 
553 aa  317  3e-85  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.188217  normal 
 
 
-
 
NC_011080  SNSL254_A4887  methyl-accepting chemotaxis protein I  53.59 
 
 
553 aa  317  3e-85  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  57.59 
 
 
592 aa  317  3e-85  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_011094  SeSA_A4786  methyl-accepting chemotaxis protein I  53.59 
 
 
553 aa  317  3e-85  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.709187  normal 
 
 
-
 
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