More than 300 homologs were found in PanDaTox collection
for query gene PC1_3443 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013421  Pecwa_3600  methyl-accepting chemotaxis sensory transducer  94.31 
 
 
510 aa  957    Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3443  methyl-accepting chemotaxis sensory transducer  100 
 
 
511 aa  1026    Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.330959  n/a   
 
 
-
 
NC_012912  Dd1591_0769  methyl-accepting chemotaxis sensory transducer  76.16 
 
 
505 aa  716    Dickeya zeae Ech1591  Bacteria  normal  0.0409416  n/a   
 
 
-
 
NC_012917  PC1_4161  methyl-accepting chemotaxis sensory transducer  59.25 
 
 
628 aa  410  1e-113  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0055  methyl-accepting chemotaxis sensory transducer  56.31 
 
 
628 aa  411  1e-113  Dickeya zeae Ech1591  Bacteria  normal  0.608397  n/a   
 
 
-
 
NC_013421  Pecwa_4443  methyl-accepting chemotaxis sensory transducer  63.66 
 
 
630 aa  410  1e-113  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0071  methyl-accepting chemotaxis sensory transducer  49.31 
 
 
630 aa  401  9.999999999999999e-111  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_0034  methyl-accepting chemotaxis sensory transducer  59.26 
 
 
649 aa  396  1e-109  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.38678  n/a   
 
 
-
 
NC_009832  Spro_0080  methyl-accepting chemotaxis sensory transducer  57.91 
 
 
642 aa  395  1e-109  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_4122  methyl-accepting chemotaxis protein  59.26 
 
 
649 aa  396  1e-109  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  61.22 
 
 
661 aa  388  1e-106  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3774  methyl-accepting chemotaxis protein  66.12 
 
 
649 aa  377  1e-103  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1816  methyl-accepting chemotaxis sensory transducer  57.82 
 
 
651 aa  372  1e-102  Dickeya dadantii Ech703  Bacteria  normal  0.700193  n/a   
 
 
-
 
NC_012912  Dd1591_1838  methyl-accepting chemotaxis sensory transducer  58.17 
 
 
667 aa  370  1e-101  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2081  methyl-accepting chemotaxis sensory transducer  56.73 
 
 
668 aa  368  1e-100  Dickeya dadantii Ech703  Bacteria  normal  0.622232  n/a   
 
 
-
 
NC_012880  Dd703_1806  methyl-accepting chemotaxis sensory transducer  58.38 
 
 
652 aa  367  1e-100  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2100  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
512 aa  354  2e-96  Enterobacter sp. 638  Bacteria  normal  0.0381834  normal 
 
 
-
 
NC_013421  Pecwa_2019  methyl-accepting chemotaxis sensory transducer  58.44 
 
 
644 aa  350  2e-95  Pectobacterium wasabiae WPP163  Bacteria  normal  0.858801  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  41.65 
 
 
578 aa  350  4e-95  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  41.24 
 
 
580 aa  348  1e-94  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  46.98 
 
 
566 aa  347  4e-94  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_012912  Dd1591_2086  methyl-accepting chemotaxis sensory transducer  57.4 
 
 
653 aa  342  7e-93  Dickeya zeae Ech1591  Bacteria  normal  0.0240769  n/a   
 
 
-
 
NC_012917  PC1_4172  methyl-accepting chemotaxis sensory transducer  54.97 
 
 
653 aa  341  2e-92  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1776  methyl-accepting chemotaxis sensory transducer  57.01 
 
 
654 aa  338  9.999999999999999e-92  Dickeya zeae Ech1591  Bacteria  normal  0.840752  n/a   
 
 
-
 
NC_012912  Dd1591_2327  methyl-accepting chemotaxis sensory transducer  56.88 
 
 
655 aa  337  1.9999999999999998e-91  Dickeya zeae Ech1591  Bacteria  normal  0.716134  n/a   
 
 
-
 
NC_013421  Pecwa_4454  methyl-accepting chemotaxis sensory transducer  54.09 
 
 
653 aa  337  3.9999999999999995e-91  Pectobacterium wasabiae WPP163  Bacteria  normal  0.625525  n/a   
 
 
-
 
NC_011353  ECH74115_2026  methyl-accepting chemotaxis protein III  58.01 
 
 
470 aa  337  3.9999999999999995e-91  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  hitchhiker  0.000000214401 
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  41.07 
 
 
567 aa  335  1e-90  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_01378  methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor  58.99 
 
 
546 aa  334  3e-90  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2225  methyl-accepting chemotaxis sensory transducer  58.99 
 
 
546 aa  334  3e-90  Escherichia coli DH1  Bacteria  normal  0.213228  n/a   
 
 
-
 
NC_009801  EcE24377A_1600  methyl-accepting chemotaxis protein III  58.99 
 
 
546 aa  334  3e-90  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_1753  methyl-accepting chemotaxis protein III  58.99 
 
 
546 aa  333  3e-90  Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  2.79367e-17 
 
 
-
 
NC_012892  B21_01390  hypothetical protein  58.99 
 
 
546 aa  334  3e-90  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_2238  methyl-accepting chemotaxis sensory transducer  58.68 
 
 
546 aa  333  4e-90  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A1503  methyl-accepting chemotaxis protein III  58.68 
 
 
546 aa  333  5e-90  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  50.93 
 
 
562 aa  332  1e-89  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  46.31 
 
 
559 aa  330  3e-89  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  42.5 
 
 
572 aa  328  1.0000000000000001e-88  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_013421  Pecwa_1849  methyl-accepting chemotaxis sensory transducer  60.67 
 
 
570 aa  328  1.0000000000000001e-88  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1857  methyl-accepting chemotaxis sensory transducer  52.27 
 
 
561 aa  327  3e-88  Pectobacterium wasabiae WPP163  Bacteria  normal  0.769355  n/a   
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  59.33 
 
 
557 aa  327  3e-88  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3873  methyl-accepting chemotaxis sensory transducer  56.33 
 
 
575 aa  327  3e-88  Pectobacterium wasabiae WPP163  Bacteria  normal  0.460221  n/a   
 
 
-
 
NC_009436  Ent638_3407  methyl-accepting chemotaxis sensory transducer  43.07 
 
 
545 aa  327  3e-88  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  59.33 
 
 
557 aa  327  3e-88  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  41.12 
 
 
569 aa  326  5e-88  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  39.24 
 
 
583 aa  326  7e-88  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  59 
 
 
557 aa  325  1e-87  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_011205  SeD_A3501  methyl-accepting chemotaxis sensory transducer  40.99 
 
 
547 aa  325  1e-87  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.601659  normal 
 
 
-
 
NC_012917  PC1_1208  methyl-accepting chemotaxis sensory transducer  49.75 
 
 
555 aa  325  1e-87  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000392698  n/a   
 
 
-
 
NC_011080  SNSL254_A3406  methyl-accepting chemotaxis sensory transducer  40.99 
 
 
547 aa  324  2e-87  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  57.45 
 
 
595 aa  324  2e-87  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_011094  SeSA_A3335  methyl-accepting chemotaxis sensory transducer  40.99 
 
 
547 aa  323  3e-87  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.499063 
 
 
-
 
NC_011083  SeHA_C3400  methyl-accepting chemotaxis sensory transducer  40.99 
 
 
547 aa  324  3e-87  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.779493 
 
 
-
 
NC_011149  SeAg_B3326  methyl-accepting chemotaxis sensory transducer  40.99 
 
 
547 aa  324  3e-87  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1804  methyl-accepting chemotaxis sensory transducer  55.56 
 
 
562 aa  323  3e-87  Dickeya zeae Ech1591  Bacteria  normal  0.0522685  n/a   
 
 
-
 
NC_012912  Dd1591_1535  methyl-accepting chemotaxis sensory transducer  55.65 
 
 
574 aa  321  1.9999999999999998e-86  Dickeya zeae Ech1591  Bacteria  normal  0.241891  n/a   
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  38.54 
 
 
554 aa  321  1.9999999999999998e-86  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_012917  PC1_2609  methyl-accepting chemotaxis sensory transducer  56.51 
 
 
561 aa  321  1.9999999999999998e-86  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3679  methyl-accepting chemotaxis sensory transducer  42.5 
 
 
567 aa  321  1.9999999999999998e-86  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  55.96 
 
 
575 aa  320  3e-86  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_010557  BamMC406_5887  methyl-accepting chemotaxis sensory transducer  60.07 
 
 
519 aa  320  3.9999999999999996e-86  Burkholderia ambifaria MC40-6  Bacteria  normal  0.330697  normal 
 
 
-
 
NC_011149  SeAg_B3779  methyl-accepting chemotaxis protein  56.71 
 
 
547 aa  320  5e-86  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2018  methyl-accepting chemotaxis sensory transducer  58.19 
 
 
650 aa  320  6e-86  Pectobacterium wasabiae WPP163  Bacteria  normal  0.894021  n/a   
 
 
-
 
NC_013421  Pecwa_3123  methyl-accepting chemotaxis sensory transducer  53.26 
 
 
555 aa  319  6e-86  Pectobacterium wasabiae WPP163  Bacteria  decreased coverage  0.000142041  n/a   
 
 
-
 
NC_008392  Bamb_6127  methyl-accepting chemotaxis sensory transducer  60.07 
 
 
519 aa  319  6e-86  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0128017 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  41.51 
 
 
559 aa  319  7.999999999999999e-86  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1631  methyl-accepting chemotaxis protein  54.04 
 
 
579 aa  319  9e-86  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1742  methyl-accepting chemotaxis sensory transducer  54.04 
 
 
579 aa  318  1e-85  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2617  methyl-accepting chemotaxis sensory transducer  59.18 
 
 
573 aa  318  1e-85  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.38785  n/a   
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  48.64 
 
 
549 aa  318  1e-85  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_012880  Dd703_1507  methyl-accepting chemotaxis sensory transducer  58.36 
 
 
573 aa  317  2e-85  Dickeya dadantii Ech703  Bacteria  normal  0.273861  n/a   
 
 
-
 
NC_011083  SeHA_C3889  methyl-accepting chemotaxis protein I  56.4 
 
 
547 aa  317  2e-85  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_2983  methyl-accepting chemotaxis sensory transducer  51.51 
 
 
556 aa  317  3e-85  Serratia proteamaculans 568  Bacteria  normal  0.96835  normal 
 
 
-
 
NC_010681  Bphyt_0409  methyl-accepting chemotaxis sensory transducer  39.96 
 
 
585 aa  317  3e-85  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A3769  methyl-accepting chemotaxis protein I  56.4 
 
 
547 aa  317  3e-85  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A3846  methyl-accepting chemotaxis protein I  56.4 
 
 
547 aa  316  6e-85  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A3949  methyl-accepting chemotaxis protein I  56.4 
 
 
547 aa  315  9e-85  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.748503  normal 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  42.12 
 
 
586 aa  315  9.999999999999999e-85  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  52.17 
 
 
542 aa  315  9.999999999999999e-85  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  41.12 
 
 
596 aa  315  9.999999999999999e-85  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2308  methyl-accepting chemotaxis sensory transducer  53.22 
 
 
560 aa  315  9.999999999999999e-85  Dickeya dadantii Ech703  Bacteria  normal  0.52721  n/a   
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  53.69 
 
 
552 aa  315  9.999999999999999e-85  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  51.38 
 
 
543 aa  315  1.9999999999999998e-84  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_0395  methyl-accepting chemotaxis sensory transducer  54.12 
 
 
556 aa  314  2.9999999999999996e-84  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2982  methyl-accepting chemotaxis sensory transducer  57.94 
 
 
541 aa  314  2.9999999999999996e-84  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1343  methyl-accepting chemotaxis sensory transducer  40.92 
 
 
620 aa  313  2.9999999999999996e-84  Acidovorax citrulli AAC00-1  Bacteria  normal  0.244601  normal  0.213177 
 
 
-
 
NC_008752  Aave_1405  methyl-accepting chemotaxis sensory transducer  51.4 
 
 
548 aa  312  6.999999999999999e-84  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A1716  methyl-accepting chemotaxis protein III  58.7 
 
 
541 aa  311  1e-83  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.0288519 
 
 
-
 
NC_011083  SeHA_C1804  methyl-accepting chemotaxis protein III  58.7 
 
 
535 aa  312  1e-83  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A1744  methyl-accepting chemotaxis protein III  58.7 
 
 
535 aa  312  1e-83  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.693576  normal  0.460124 
 
 
-
 
NC_011149  SeAg_B1531  methyl-accepting chemotaxis protein III  58.7 
 
 
541 aa  312  1e-83  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A1740  methyl-accepting chemotaxis protein III  58.7 
 
 
541 aa  312  1e-83  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A4887  methyl-accepting chemotaxis protein I  51.17 
 
 
553 aa  311  2e-83  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C4939  methyl-accepting chemotaxis protein I  51.17 
 
 
553 aa  311  2e-83  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.188217  normal 
 
 
-
 
NC_010159  YpAngola_A3517  methyl-accepting chemotaxis protein  57.68 
 
 
536 aa  311  2e-83  Yersinia pestis Angola  Bacteria  normal  normal  0.549342 
 
 
-
 
NC_011992  Dtpsy_1752  methyl-accepting chemotaxis sensory transducer  39.11 
 
 
523 aa  311  2e-83  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0727  methyl-accepting chemotaxis sensory transducer  38.84 
 
 
559 aa  311  2e-83  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1643  methyl-accepting chemotaxis protein  57.68 
 
 
536 aa  311  2e-83  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2509  methyl-accepting chemotaxis sensory transducer  55.21 
 
 
557 aa  310  2.9999999999999997e-83  Dickeya dadantii Ech703  Bacteria  normal  0.377261  n/a   
 
 
-
 
NC_012912  Dd1591_2408  methyl-accepting chemotaxis sensory transducer  54.18 
 
 
557 aa  310  4e-83  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
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