Gene Pecwa_2018 details

Gene Information

• Locus tag: Pecwa_2018
• ID: 8530417
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 2195062
• End bp: 2197014
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 48%
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_003259404
• Protein GI: 261821298

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.894021
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGCATC TTGCTCGTCG AATTCGTAAC ACAAAAATCG CACATAAACT GTATGCGGGA 
TTTGGCATTA TTTTATTACT CGTTATTATC GCTTCATCGC TTAGTACAAC AAGATTCAGA 
GACATTAAAG ATATTTATGA AAAAACCAAT CTTATCTATA GCGTAAATAT TGAGGTCTTT 
CAGGCAAAAA TAAATCGTGT TAAATATTTC TACGCACCCG ATGAAAATAC AAAAGATATT 
CTGGCTAAAT TTGTTAAAAG TGCAACAGAC TTAACAGACA GTGCAAAAAC GCTGGCCTGG 
AGCACCGATG AATTGGGTCA CATCAACAGC TTAAAAGAAA ATCTAGAAGG CTTTCAGACA 
GCAGTCTCTG CCATGTCCGT TGCAACACAA AAAGCGGTTG AGATTCAGAG GAAAGTGAAT 
CAGCTACATG CACAAGCTAC ACTGGAACCC GTTGCTCAGA CCATTCATAA CACCAGCGCA 
TTCCCCGATA ATGATGCTTA TTACGCTATT AGCAAGCTGG CTTTCTTGTT AAGTGAAGTG 
CAAAAACTGA GTTATGAGCT GCAAATAACA AAAGATGAGA AAACATTAAC CGCGCTGAAT 
ACACGTTATG CAGAAACGGA ATCAGCCTAT CAGGCATTAC CGATTTTACC TGCCGATCTG 
AAAGGCCAGG CGGATGCATT ACGAAACAAC ATTAAACAAT ACCAACAGCT TAATACAGAC 
TATTACACCG CTTTCGATGA CGTGAAAAAA GCAGAATATC TGGTCATGAG AGCAGGAACA 
AAAAGCAGTG CAGACATCAA CGCACTGACT GCCATTATCA AAGCGAAAAA CGATGAATTA 
GCCTATAACT CTGCCACCAT CACGATGATT ATCGGTCTCA TTGCCGTCAT TATCGGCATC 
ATCATCTCAA TCTACATTAC CCGGATTATC ACCAGACCCA TCATCCATAA TCTGTCTCTC 
GCGGAGCGAA TTGCCAGTGG CGACCTCACC ACCTCGATTC AGACCGATCG CCACGATGAA 
CTAGGAAGAC TCACCCACGC GATGGGGACG ATGAATGAAC AGCTACGCCA CGTTATTTCC 
GAAGTACGGG ACAGCGTAGG TAGCGTCAGC CAATCGGCGA GTAAAATCGC CACAGGCAAT 
AGCGATCTTT CGTCACGTAC CGAGCAACAG TCGGCGGCCG TCGTTGAAAC CGCAGCCAGT 
ATGGAAGAAC TCACCTCAAC GGTGAAAAAC AACGCCGACA ATGCCAAGCA TGCCAGCCAG 
ATCGCTGCCG ATGCCTCCAA AAATGCGCTT AAAGGCGGCG AAGTCGTGAA ACAAGTGGTG 
ACGACGATGG ACAATATCGC GGCCAGCTCC AGGAAAATCG CCGATATCAC CACTGTCATC 
AACAGTATTG CCTTCCAGAC CAACATTCTG GCGCTAAACG CCGCAGTAGA AGCCGCGCGG 
GCCGGTGAAC AAGGCCGTGG TTTTGCCGTG GTCGCAGGCG AAGTGCGCAG TTTGTCACAA 
CGCAGCTCTC AGGCAGCCAA AGACATTGAG GCGCTGATCG CAGAATCGGT CGAACGTACC 
AATGCGGGTA GCCATCTTGT TGCAGTTGCC GGAGAAACCA TGGAGCAGAT CGTCGATTCC 
GTTTCCCGCG TGAACGACAT TATGGGGGAA ATTTCCTCCG CCTCTGAGGA ACAGAGCCGA 
GGAATTGGGC AAATCGCGCA GGCCATTGGT GAATTGGACA CCACCACGCA GCAGAATGCC 
TCGCTGGTAA TGGAATCCTC CATTTCCGCC AATTCATTGG AAGAACAGGC GGTGCTGTTA 
GAGAAGTTGC TTGAACACTT CCGCGTTTCT CAATCCGACA ACCGCGCTGC CTCACGCACA 
TCCTCCTCCA CGCCACGCCA TGCGTTGCCA AACCGAGTGT CAACAACAGA CAAAAAAGCG 
GCTTCGTCAG AAAGCGACTG GACGTCGTTT TAG 

 

Protein sequence

MQHLARRIRN TKIAHKLYAG FGIILLLVII ASSLSTTRFR DIKDIYEKTN LIYSVNIEVF 
QAKINRVKYF YAPDENTKDI LAKFVKSATD LTDSAKTLAW STDELGHINS LKENLEGFQT 
AVSAMSVATQ KAVEIQRKVN QLHAQATLEP VAQTIHNTSA FPDNDAYYAI SKLAFLLSEV 
QKLSYELQIT KDEKTLTALN TRYAETESAY QALPILPADL KGQADALRNN IKQYQQLNTD 
YYTAFDDVKK AEYLVMRAGT KSSADINALT AIIKAKNDEL AYNSATITMI IGLIAVIIGI 
IISIYITRII TRPIIHNLSL AERIASGDLT TSIQTDRHDE LGRLTHAMGT MNEQLRHVIS 
EVRDSVGSVS QSASKIATGN SDLSSRTEQQ SAAVVETAAS MEELTSTVKN NADNAKHASQ 
IAADASKNAL KGGEVVKQVV TTMDNIAASS RKIADITTVI NSIAFQTNIL ALNAAVEAAR 
AGEQGRGFAV VAGEVRSLSQ RSSQAAKDIE ALIAESVERT NAGSHLVAVA GETMEQIVDS 
VSRVNDIMGE ISSASEEQSR GIGQIAQAIG ELDTTTQQNA SLVMESSISA NSLEEQAVLL 
EKLLEHFRVS QSDNRAASRT SSSTPRHALP NRVSTTDKKA ASSESDWTSF