Gene SNSL254_A3406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3406 
Symbol 
ID6485663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3303655 
End bp3305298 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content57% 
IMG OID642738697 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_002042417 
Protein GI194443141 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTGC TGCAAAACTT TACTATTCGT ATGGTCATGC TGACGATACT GGGACTTTTT 
TGTCTACTCT GGTCGGGGGT GGGGTTATAC AGCGTCCATG CTTTATCCGA AGTTTCGGAA
GGAAATGATA TTGACCGGCA TCTTGTGCGG CAAATGACGG TGCTAAGCCA GGGTAACGAT
CAATATTTCC GCTTTGTTAC CCGCCTTAGC CGCGCGATGG ATGTAAAAAT CGGCGGCGGC
ACGCCCGATT TTGCGCCCGC CCGGCAGTCG CTCGAGAATA TGCGTCAGAA GCTGGAGGAG
ATGAAAGCGC TATCGCCAGG GCCGATGAAC CCTGATATCT CAAGGGAGGT CTTGTCCAAC
TGGCAGGCCT TGCTGGAGAA AGGCGTCGTT CCTCAAATGC AACTGGCGCA GCAAGGATCG
CTAACCGCCT GGAGCGAACA TGCCAGTACG GTCACGCCCG CACTCAGTCG CGCGTTCGGC
GCCAGCGCGG AACGGTTTAG TCATGAAGCT GGCGCCATGC TGGATAACAC ACGTGTGATG
GTCGATGGTA AAACCTATAC CATCCGCATC CTGCTTATTA CGGCGGTGAT TCTGGGCATT
GCTATCCTGA TTTTTACCGA TCGCTATCTG GTTGCAATGA TGGTGAAACC GCTGGAGCGC
ATCCGTCAGC AATTTCAGCG CATCGCGCAA GGCGATCTTA GCCAGCCGAT TGAAGCGTTG
GGGCGTAACT GCGTAGGCCG GTTGGTGCCG CTACTGCGCG CGATGCAGGA CAGTTTACGC
GAAGCCGTGA GTACGATCCG CGCCGGAAGC GACAATATCT GGCGCGGCGC GACGGAAATT
TCTACCGGTA ATAACGATCT CTCTTCCCGA ACGGAAGAAC AGGCCGCTGC GCTGGAAGAG
ACGGCCGCCA GCATGGAACA GCTTACCGCA ACGGTGAAAA TGAACGCCGA ACACGCTCGC
CAGGCGAGTC AGCTTGCGGA TGCCGCCTCG CTAACGGCAG GAAAAGGCGG TGAACTGGTT
TCCGATGTGG TAGAAACAAT GAACGGTATT TCCGCCAGTT CGCAGCAGAT CGCCGAAATT
ACTACCGTGA TTAATAGTAT TGCTTTCCAG ACCAATATTC TGGCCTTGAA CGCAGCGGTA
GAAGCGGCCA GAGCGGGCGA GCAGGGACGC GGCTTCGCGG TGGTCGCCGG TGAGGTACGT
AACCTGGCCA GCCGCAGCGC GGGGGCGGCG AAAGAAATTG AAGCCTTAAT TGGCGAATCG
GTACGTCGCG TAGCGCAGGG CGCGCAGTTG GTCCAGGAGA CCGGCGCGAC GATGGACGCC
ATCCTGCGCG GCGTCACGGA AGTGACGACG ATTATGAAAC AGATCGCGTC CGCCTCCGAA
GAACAGAGTA AAGGTATCTC TCAGGTTGGC GTGGCGATCA CGCAAATGGA TAGCGTTACG
CAACAAAACG CCGCGCTGGT TGAGCAGGTT TCCGCGGCGG CAGCGGCGCT GGAACGGCAG
ACGGAGGATT TGCAACGCTC CGTACAGCAG TTCCGGCTTT CCGCTAGTGA GCCGCAACAA
CGCGTAACGG CGAAAGCGGC GCCTGGCGTT CAGAGAATGG CGTCGGCTCC CGCACAGTCT
ACTGATGAAT GGGTTTCCTT CTGA
 
Protein sequence
MRLLQNFTIR MVMLTILGLF CLLWSGVGLY SVHALSEVSE GNDIDRHLVR QMTVLSQGND 
QYFRFVTRLS RAMDVKIGGG TPDFAPARQS LENMRQKLEE MKALSPGPMN PDISREVLSN
WQALLEKGVV PQMQLAQQGS LTAWSEHAST VTPALSRAFG ASAERFSHEA GAMLDNTRVM
VDGKTYTIRI LLITAVILGI AILIFTDRYL VAMMVKPLER IRQQFQRIAQ GDLSQPIEAL
GRNCVGRLVP LLRAMQDSLR EAVSTIRAGS DNIWRGATEI STGNNDLSSR TEEQAAALEE
TAASMEQLTA TVKMNAEHAR QASQLADAAS LTAGKGGELV SDVVETMNGI SASSQQIAEI
TTVINSIAFQ TNILALNAAV EAARAGEQGR GFAVVAGEVR NLASRSAGAA KEIEALIGES
VRRVAQGAQL VQETGATMDA ILRGVTEVTT IMKQIASASE EQSKGISQVG VAITQMDSVT
QQNAALVEQV SAAAAALERQ TEDLQRSVQQ FRLSASEPQQ RVTAKAAPGV QRMASAPAQS
TDEWVSF