More than 300 homologs were found in PanDaTox collection
for query gene SNSL254_A3406 on replicon NC_011080
Organism: Salmonella enterica subsp. enterica serovar Newport str. SL254



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011080  SNSL254_A3406  methyl-accepting chemotaxis sensory transducer  100 
 
 
547 aa  1102    Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C3400  methyl-accepting chemotaxis sensory transducer  99.45 
 
 
547 aa  1096    Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.779493 
 
 
-
 
NC_011205  SeD_A3501  methyl-accepting chemotaxis sensory transducer  99.82 
 
 
547 aa  1100    Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.601659  normal 
 
 
-
 
NC_009436  Ent638_3407  methyl-accepting chemotaxis sensory transducer  70.57 
 
 
545 aa  781    Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3326  methyl-accepting chemotaxis sensory transducer  99.45 
 
 
547 aa  1096    Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A3335  methyl-accepting chemotaxis sensory transducer  99.45 
 
 
547 aa  1097    Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.499063 
 
 
-
 
NC_012917  PC1_1208  methyl-accepting chemotaxis sensory transducer  53.51 
 
 
555 aa  540  9.999999999999999e-153  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000392698  n/a   
 
 
-
 
NC_013421  Pecwa_3123  methyl-accepting chemotaxis sensory transducer  53.15 
 
 
555 aa  518  1e-146  Pectobacterium wasabiae WPP163  Bacteria  decreased coverage  0.000142041  n/a   
 
 
-
 
NC_012912  Dd1591_2937  methyl-accepting chemotaxis sensory transducer  51.74 
 
 
564 aa  475  1e-133  Dickeya zeae Ech1591  Bacteria  normal  0.0948744  n/a   
 
 
-
 
NC_013421  Pecwa_1940  methyl-accepting chemotaxis sensory transducer  47.34 
 
 
560 aa  468  9.999999999999999e-131  Pectobacterium wasabiae WPP163  Bacteria  normal  0.364705  n/a   
 
 
-
 
NC_012880  Dd703_1119  methyl-accepting chemotaxis sensory transducer  47.95 
 
 
561 aa  468  9.999999999999999e-131  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1669  methyl-accepting chemotaxis sensory transducer  48.05 
 
 
560 aa  460  9.999999999999999e-129  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2408  methyl-accepting chemotaxis sensory transducer  44.96 
 
 
557 aa  440  9.999999999999999e-123  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2308  methyl-accepting chemotaxis sensory transducer  46.42 
 
 
560 aa  441  9.999999999999999e-123  Dickeya dadantii Ech703  Bacteria  normal  0.52721  n/a   
 
 
-
 
NC_012912  Dd1591_2407  methyl-accepting chemotaxis sensory transducer  44.44 
 
 
555 aa  436  1e-121  Dickeya zeae Ech1591  Bacteria  normal  0.880863  n/a   
 
 
-
 
NC_012912  Dd1591_2406  methyl-accepting chemotaxis sensory transducer  44.23 
 
 
559 aa  431  1e-119  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2509  methyl-accepting chemotaxis sensory transducer  46.78 
 
 
557 aa  422  1e-116  Dickeya dadantii Ech703  Bacteria  normal  0.377261  n/a   
 
 
-
 
NC_012912  Dd1591_0395  methyl-accepting chemotaxis sensory transducer  42.53 
 
 
556 aa  404  1e-111  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2307  methyl-accepting chemotaxis sensory transducer  42.7 
 
 
558 aa  390  1e-107  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1782  methyl-accepting chemotaxis sensory transducer  42 
 
 
559 aa  369  1e-101  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2409  methyl-accepting chemotaxis sensory transducer  42.62 
 
 
539 aa  370  1e-101  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1384  methyl-accepting chemotaxis sensory transducer  40.99 
 
 
559 aa  369  1e-101  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1535  methyl-accepting chemotaxis sensory transducer  48.73 
 
 
574 aa  363  3e-99  Dickeya zeae Ech1591  Bacteria  normal  0.241891  n/a   
 
 
-
 
NC_013421  Pecwa_3873  methyl-accepting chemotaxis sensory transducer  55.96 
 
 
575 aa  355  1e-96  Pectobacterium wasabiae WPP163  Bacteria  normal  0.460221  n/a   
 
 
-
 
NC_010498  EcSMS35_1753  methyl-accepting chemotaxis protein III  50 
 
 
546 aa  352  8.999999999999999e-96  Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  2.79367e-17 
 
 
-
 
NC_013421  Pecwa_1849  methyl-accepting chemotaxis sensory transducer  59.94 
 
 
570 aa  352  1e-95  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  53.46 
 
 
661 aa  352  1e-95  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_01378  methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor  50 
 
 
546 aa  351  2e-95  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2225  methyl-accepting chemotaxis sensory transducer  50 
 
 
546 aa  351  2e-95  Escherichia coli DH1  Bacteria  normal  0.213228  n/a   
 
 
-
 
NC_012892  B21_01390  hypothetical protein  50 
 
 
546 aa  351  2e-95  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_1600  methyl-accepting chemotaxis protein III  50 
 
 
546 aa  351  2e-95  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_2026  methyl-accepting chemotaxis protein III  50.6 
 
 
470 aa  351  2e-95  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  hitchhiker  0.000000214401 
 
 
-
 
NC_009832  Spro_2983  methyl-accepting chemotaxis sensory transducer  56.68 
 
 
556 aa  350  3e-95  Serratia proteamaculans 568  Bacteria  normal  0.96835  normal 
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  57.48 
 
 
557 aa  350  5e-95  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  57.48 
 
 
557 aa  350  5e-95  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3679  methyl-accepting chemotaxis sensory transducer  55.4 
 
 
567 aa  350  5e-95  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  57.48 
 
 
557 aa  350  5e-95  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_2238  methyl-accepting chemotaxis sensory transducer  50.48 
 
 
546 aa  349  9e-95  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A1503  methyl-accepting chemotaxis protein III  50.48 
 
 
546 aa  349  9e-95  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  60.19 
 
 
566 aa  347  3e-94  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_009832  Spro_2982  methyl-accepting chemotaxis sensory transducer  61.14 
 
 
541 aa  346  5e-94  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  54.84 
 
 
562 aa  346  7e-94  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_013421  Pecwa_1857  methyl-accepting chemotaxis sensory transducer  56.68 
 
 
561 aa  345  8e-94  Pectobacterium wasabiae WPP163  Bacteria  normal  0.769355  n/a   
 
 
-
 
NC_012917  PC1_2609  methyl-accepting chemotaxis sensory transducer  58.84 
 
 
561 aa  344  2e-93  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1816  methyl-accepting chemotaxis sensory transducer  45.49 
 
 
651 aa  343  5.999999999999999e-93  Dickeya dadantii Ech703  Bacteria  normal  0.700193  n/a   
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  55.19 
 
 
552 aa  343  5.999999999999999e-93  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_011083  SeHA_C3889  methyl-accepting chemotaxis protein I  58.51 
 
 
547 aa  342  1e-92  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1507  methyl-accepting chemotaxis sensory transducer  51.34 
 
 
573 aa  342  1e-92  Dickeya dadantii Ech703  Bacteria  normal  0.273861  n/a   
 
 
-
 
NC_011094  SeSA_A3769  methyl-accepting chemotaxis protein I  58.51 
 
 
547 aa  342  1e-92  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3779  methyl-accepting chemotaxis protein  58.51 
 
 
547 aa  341  2e-92  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1804  methyl-accepting chemotaxis sensory transducer  49.39 
 
 
562 aa  340  4e-92  Dickeya zeae Ech1591  Bacteria  normal  0.0522685  n/a   
 
 
-
 
NC_009708  YpsIP31758_1643  methyl-accepting chemotaxis protein  58.24 
 
 
536 aa  339  8e-92  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3517  methyl-accepting chemotaxis protein  58.24 
 
 
536 aa  339  8e-92  Yersinia pestis Angola  Bacteria  normal  normal  0.549342 
 
 
-
 
NC_011080  SNSL254_A3846  methyl-accepting chemotaxis protein I  58.21 
 
 
547 aa  339  9.999999999999999e-92  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_2617  methyl-accepting chemotaxis sensory transducer  44.83 
 
 
573 aa  338  9.999999999999999e-92  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.38785  n/a   
 
 
-
 
NC_011205  SeD_A3949  methyl-accepting chemotaxis protein I  57.91 
 
 
547 aa  338  1.9999999999999998e-91  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.748503  normal 
 
 
-
 
NC_011083  SeHA_C4939  methyl-accepting chemotaxis protein I  53.91 
 
 
553 aa  337  1.9999999999999998e-91  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.188217  normal 
 
 
-
 
NC_011080  SNSL254_A4887  methyl-accepting chemotaxis protein I  53.91 
 
 
553 aa  337  1.9999999999999998e-91  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  50 
 
 
567 aa  337  2.9999999999999997e-91  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2457  methyl-accepting chemotaxis sensory transducer  42.35 
 
 
555 aa  337  2.9999999999999997e-91  Enterobacter sp. 638  Bacteria  normal  0.890786  normal 
 
 
-
 
NC_011094  SeSA_A4786  methyl-accepting chemotaxis protein I  53.66 
 
 
553 aa  336  5e-91  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.709187  normal 
 
 
-
 
NC_011205  SeD_A4946  methyl-accepting chemotaxis protein I  53.66 
 
 
553 aa  336  5e-91  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.556415 
 
 
-
 
NC_010465  YPK_1742  methyl-accepting chemotaxis sensory transducer  53.59 
 
 
579 aa  335  9e-91  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2108  methyl-accepting chemotaxis sensory transducer  54.62 
 
 
556 aa  335  9e-91  Dickeya dadantii Ech703  Bacteria  normal  0.0190315  n/a   
 
 
-
 
NC_012880  Dd703_0562  methyl-accepting chemotaxis sensory transducer  47.7 
 
 
570 aa  335  2e-90  Dickeya dadantii Ech703  Bacteria  decreased coverage  0.00821394  n/a   
 
 
-
 
NC_009708  YpsIP31758_1631  methyl-accepting chemotaxis protein  53.31 
 
 
579 aa  334  3e-90  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1806  methyl-accepting chemotaxis sensory transducer  49.54 
 
 
652 aa  333  7.000000000000001e-90  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3580  methyl-accepting chemotaxis sensory transducer  52.6 
 
 
572 aa  332  1e-89  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2081  methyl-accepting chemotaxis sensory transducer  52.09 
 
 
668 aa  329  6e-89  Dickeya dadantii Ech703  Bacteria  normal  0.622232  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  52.56 
 
 
542 aa  328  1.0000000000000001e-88  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1838  methyl-accepting chemotaxis sensory transducer  47.48 
 
 
667 aa  328  1.0000000000000001e-88  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0523  methyl-accepting chemotaxis sensory transducer  46.12 
 
 
568 aa  328  1.0000000000000001e-88  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3700  methyl-accepting chemotaxis sensory transducer  54.74 
 
 
554 aa  328  1.0000000000000001e-88  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.125609 
 
 
-
 
NC_009436  Ent638_0380  methyl-accepting chemotaxis sensory transducer  45.01 
 
 
549 aa  328  1.0000000000000001e-88  Enterobacter sp. 638  Bacteria  normal  0.214895  normal 
 
 
-
 
CP001637  EcDH1_3642  methyl-accepting chemotaxis sensory transducer  54.76 
 
 
551 aa  328  2.0000000000000001e-88  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_04232  methyl-accepting chemotaxis protein I, serine sensor receptor  55.41 
 
 
551 aa  327  3e-88  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_04198  hypothetical protein  55.41 
 
 
551 aa  327  3e-88  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B1203  methyl-accepting chemotaxis protein II  59.19 
 
 
553 aa  327  3e-88  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.697919  n/a   
 
 
-
 
NC_009832  Spro_0080  methyl-accepting chemotaxis sensory transducer  50.76 
 
 
642 aa  327  3e-88  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_4947  methyl-accepting chemotaxis protein I  54.62 
 
 
554 aa  327  5e-88  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_27970  chemotaxis sensory transducer  43.61 
 
 
575 aa  327  5e-88  Azotobacter vinelandii DJ  Bacteria  normal  0.0997024  n/a   
 
 
-
 
NC_010498  EcSMS35_4900  methyl-accepting chemotaxis protein I  55.14 
 
 
554 aa  326  5e-88  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.979291 
 
 
-
 
NC_011205  SeD_A1326  methyl-accepting chemotaxis protein II  58.88 
 
 
553 aa  326  6e-88  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.452066  hitchhiker  2.3261e-17 
 
 
-
 
NC_011094  SeSA_A2074  methyl-accepting chemotaxis protein II  43.85 
 
 
553 aa  326  6e-88  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.162752  hitchhiker  0.000345874 
 
 
-
 
NC_011083  SeHA_C2134  methyl-accepting chemotaxis protein II  43.2 
 
 
553 aa  326  6e-88  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  1.16019e-17 
 
 
-
 
NC_011080  SNSL254_A2079  methyl-accepting chemotaxis protein II  58.88 
 
 
553 aa  326  7e-88  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.429347  hitchhiker  1.96177e-16 
 
 
-
 
NC_009436  Ent638_0513  methyl-accepting chemotaxis sensory transducer  57.86 
 
 
586 aa  326  7e-88  Enterobacter sp. 638  Bacteria  normal  hitchhiker  0.00498581 
 
 
-
 
NC_011353  ECH74115_5868  methyl-accepting chemotaxis protein I  55.26 
 
 
554 aa  325  9e-88  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_4122  methyl-accepting chemotaxis protein  51.59 
 
 
649 aa  324  2e-87  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3443  methyl-accepting chemotaxis sensory transducer  40.99 
 
 
511 aa  324  2e-87  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.330959  n/a   
 
 
-
 
NC_010465  YPK_0034  methyl-accepting chemotaxis sensory transducer  51.59 
 
 
649 aa  324  2e-87  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.38678  n/a   
 
 
-
 
NC_009436  Ent638_1961  methyl-accepting chemotaxis sensory transducer  56.89 
 
 
563 aa  325  2e-87  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A1744  methyl-accepting chemotaxis protein III  49.14 
 
 
535 aa  324  3e-87  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.693576  normal  0.460124 
 
 
-
 
NC_012917  PC1_4161  methyl-accepting chemotaxis sensory transducer  57.28 
 
 
628 aa  323  3e-87  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B1531  methyl-accepting chemotaxis protein III  49.14 
 
 
541 aa  324  3e-87  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A1740  methyl-accepting chemotaxis protein III  49.14 
 
 
541 aa  324  3e-87  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_010658  SbBS512_E4893  methyl-accepting chemotaxis protein I  55.14 
 
 
551 aa  324  3e-87  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C1804  methyl-accepting chemotaxis protein III  49.14 
 
 
535 aa  323  5e-87  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A1716  methyl-accepting chemotaxis protein III  49.14 
 
 
541 aa  323  5e-87  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.0288519 
 
 
-
 
NC_009800  EcHS_A4586  methyl-accepting chemotaxis protein I  58.42 
 
 
557 aa  323  7e-87  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
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