Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_0562 |
Symbol | |
ID | 8088969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 629861 |
End bp | 631573 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644834634 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_002986195 |
Protein GI | 242238014 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00821394 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAAC AAAAAAGAAA AATTTCTTCG GTAAACAATG TTCGTCTGGT GACGTTTTTC ATTACGTTGT TGACGATCAT TCTGTTGTTG TTTGCACTTT CTATCGGCAC CGCGAGCTAC TTTTTGAAAC AGAGTAACGA TGCGTTAGAT ATGGCTAATC AGGCATCGGA TACGCGCTCG GGAATTAGCA GCAGTATGGA TCAACTGCGT GTCGCTCGTC AGTTGCTGGT TCAGGCGGTA GCTGCGTCGC GAATTGGTGA TAAAGATTCA TATAATCAGT CATTTAAAGA AGCTAACGAT CGAATCAATA GTTCCAAAAA ACGGTTCGAC GAATATATGG CCCGTGTCGA TCAGTCTTCG GAAGAAAAGG CGCTAGATAG CGAATTGACG GCCAGTTACA ACGCTTACCG TAATAACGTA CTGTTGCCTA TGGTGGAGAT GGTGCGCGGT GGTGAGTTCG AGAGCGTTAT CGAGCTAGAG ACAACATTAG CGCGGCAGTT GGACAATAAC TATGCGCTTC CTGTTCGTAA GGAGGTGAAG TATCTGAGCG AGTATGCGAG CCGGATCAAT ACCGAGGCGG AAAGAAAGTC CAATCTGGGA TACACCCTGA TGGGAACGGC ATTTGTGTTG TCGATCGTGT TAGCTGTGCT CAGCTATTTT ATCATTCGCA GAGCAGTCCT GATGCCGGTG GATATTCTGA TTGCTCGCAT TCAGAACATT GCCGGGGGGG ATTTGACTCA GCCGCCTGTC GATTTGGGAC GTAATGAAAT AGGCATTCTT GGTAAGAATC TTCAACAGAT GCAGGATTCG CTGACGAATA CCGTTTCAAT CGTGCGTGAT GGTGCTGATT CTATTTATCA GGGCGCGTCC GAGATTAGTG TGGGTAACGT CGATCTGTCT TCTCGTACTG AACAGCAAGC GGCGGCTCTT GAGCAGACGG CTGCCAGCAT GGAAGAGTTG ACTTCTACCG TGAAACAGAA CTCCGACAAC GCCAGTCACG CCAGTCAACT GGCCCGTAAT GCTTCCACCA AAGCAGAGCA GGGCGGCAAT ATTGTGAAGG AAGTCGTTAC CACCATGAGC AATATTTCTG CCAGCTCCAG AAAAATTTCA GAAATTACCA GTGTTATCAA TAGTATTGCA TTCCAAACCA ATATTCTGGC GTTGAATGCA GCTGTTGAGG CGGCGCGGGC AGGCGAACAA GGGCGTGGTT TTGCCGTCGT GGCCGGTGAG GTACGAAACC TGGCTCAGCG AAGCGCTCAG GCAGCGAAAG AAATAGAGTC CCTTATTGGT GAGTCGGGAC GTTTGGTTGA TTCCGGCTCG GAGCTGGTAA GTCGGGCGGG CGCAACGATG GATGAGATCG TGAATGCTGT CGTCAGCGTG ACGGATATTA TGGGGGAAAT CGCATCCGCC TCCGATGAGC AACGCCGCGG CATTGAGCAG GTCAATCAGG CGGTTGTCGA AATGGAGGGA TCAACCCAGC AAAATGCGGC CCTGGTACAA GAGGCTTCCT CTGCTGCTGC ATCTTTGGAG TCTCAGGCAG AGCGGCTGAC TCAGGCTGTC TCTGTATTCA AACTGCGTTC TTATACTGAC AAAGCCCCCC TCGCTGTCGT GGCACCACGT CAAAATCAGC CGCTGGTGCC GGCAACGGCG ACCGCAGCGA TAGGCAATGG GAAGAAAAAG CCTGGCGACG ATCAGAACTG GACGGTTTTT TAA
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Protein sequence | MAEQKRKISS VNNVRLVTFF ITLLTIILLL FALSIGTASY FLKQSNDALD MANQASDTRS GISSSMDQLR VARQLLVQAV AASRIGDKDS YNQSFKEAND RINSSKKRFD EYMARVDQSS EEKALDSELT ASYNAYRNNV LLPMVEMVRG GEFESVIELE TTLARQLDNN YALPVRKEVK YLSEYASRIN TEAERKSNLG YTLMGTAFVL SIVLAVLSYF IIRRAVLMPV DILIARIQNI AGGDLTQPPV DLGRNEIGIL GKNLQQMQDS LTNTVSIVRD GADSIYQGAS EISVGNVDLS SRTEQQAAAL EQTAASMEEL TSTVKQNSDN ASHASQLARN ASTKAEQGGN IVKEVVTTMS NISASSRKIS EITSVINSIA FQTNILALNA AVEAARAGEQ GRGFAVVAGE VRNLAQRSAQ AAKEIESLIG ESGRLVDSGS ELVSRAGATM DEIVNAVVSV TDIMGEIASA SDEQRRGIEQ VNQAVVEMEG STQQNAALVQ EASSAAASLE SQAERLTQAV SVFKLRSYTD KAPLAVVAPR QNQPLVPATA TAAIGNGKKK PGDDQNWTVF
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