More than 300 homologs were found in PanDaTox collection
for query gene PC1_1208 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012917  PC1_1208  methyl-accepting chemotaxis sensory transducer  100 
 
 
555 aa  1125    Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000392698  n/a   
 
 
-
 
NC_013421  Pecwa_3123  methyl-accepting chemotaxis sensory transducer  96.04 
 
 
555 aa  1043    Pectobacterium wasabiae WPP163  Bacteria  decreased coverage  0.000142041  n/a   
 
 
-
 
NC_012912  Dd1591_2937  methyl-accepting chemotaxis sensory transducer  70.23 
 
 
564 aa  768    Dickeya zeae Ech1591  Bacteria  normal  0.0948744  n/a   
 
 
-
 
NC_012880  Dd703_1119  methyl-accepting chemotaxis sensory transducer  70.41 
 
 
561 aa  759    Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_3407  methyl-accepting chemotaxis sensory transducer  54.11 
 
 
545 aa  543  1e-153  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C3400  methyl-accepting chemotaxis sensory transducer  53.51 
 
 
547 aa  539  9.999999999999999e-153  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.779493 
 
 
-
 
NC_011149  SeAg_B3326  methyl-accepting chemotaxis sensory transducer  53.33 
 
 
547 aa  539  9.999999999999999e-153  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A3501  methyl-accepting chemotaxis sensory transducer  53.51 
 
 
547 aa  539  9.999999999999999e-153  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.601659  normal 
 
 
-
 
NC_011080  SNSL254_A3406  methyl-accepting chemotaxis sensory transducer  53.51 
 
 
547 aa  540  9.999999999999999e-153  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A3335  methyl-accepting chemotaxis sensory transducer  53.33 
 
 
547 aa  540  9.999999999999999e-153  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.499063 
 
 
-
 
NC_013421  Pecwa_1940  methyl-accepting chemotaxis sensory transducer  50.53 
 
 
560 aa  530  1e-149  Pectobacterium wasabiae WPP163  Bacteria  normal  0.364705  n/a   
 
 
-
 
NC_012912  Dd1591_2406  methyl-accepting chemotaxis sensory transducer  48.87 
 
 
559 aa  524  1e-147  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1669  methyl-accepting chemotaxis sensory transducer  51.06 
 
 
560 aa  523  1e-147  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2407  methyl-accepting chemotaxis sensory transducer  49.56 
 
 
555 aa  510  1e-143  Dickeya zeae Ech1591  Bacteria  normal  0.880863  n/a   
 
 
-
 
NC_012880  Dd703_2308  methyl-accepting chemotaxis sensory transducer  49.39 
 
 
560 aa  508  9.999999999999999e-143  Dickeya dadantii Ech703  Bacteria  normal  0.52721  n/a   
 
 
-
 
NC_012880  Dd703_2509  methyl-accepting chemotaxis sensory transducer  50.38 
 
 
557 aa  487  1e-136  Dickeya dadantii Ech703  Bacteria  normal  0.377261  n/a   
 
 
-
 
NC_012912  Dd1591_2408  methyl-accepting chemotaxis sensory transducer  46.87 
 
 
557 aa  474  1e-132  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2307  methyl-accepting chemotaxis sensory transducer  45.36 
 
 
558 aa  464  1e-129  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0395  methyl-accepting chemotaxis sensory transducer  46.28 
 
 
556 aa  445  1e-123  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1384  methyl-accepting chemotaxis sensory transducer  43.52 
 
 
559 aa  422  1e-117  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3580  methyl-accepting chemotaxis sensory transducer  50 
 
 
572 aa  416  9.999999999999999e-116  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1782  methyl-accepting chemotaxis sensory transducer  43.21 
 
 
559 aa  418  9.999999999999999e-116  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  66.57 
 
 
557 aa  412  1e-114  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1849  methyl-accepting chemotaxis sensory transducer  66.18 
 
 
570 aa  414  1e-114  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  66.57 
 
 
557 aa  412  1e-114  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1535  methyl-accepting chemotaxis sensory transducer  48.25 
 
 
574 aa  414  1e-114  Dickeya zeae Ech1591  Bacteria  normal  0.241891  n/a   
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  46.93 
 
 
562 aa  410  1e-113  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  66.28 
 
 
557 aa  410  1e-113  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_012917  PC1_3679  methyl-accepting chemotaxis sensory transducer  60.37 
 
 
567 aa  409  1e-113  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2409  methyl-accepting chemotaxis sensory transducer  45.23 
 
 
539 aa  404  1e-111  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3873  methyl-accepting chemotaxis sensory transducer  61.84 
 
 
575 aa  401  9.999999999999999e-111  Pectobacterium wasabiae WPP163  Bacteria  normal  0.460221  n/a   
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  44.46 
 
 
566 aa  400  9.999999999999999e-111  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_012880  Dd703_1507  methyl-accepting chemotaxis sensory transducer  47.04 
 
 
573 aa  401  9.999999999999999e-111  Dickeya dadantii Ech703  Bacteria  normal  0.273861  n/a   
 
 
-
 
NC_009832  Spro_2983  methyl-accepting chemotaxis sensory transducer  64.21 
 
 
556 aa  394  1e-108  Serratia proteamaculans 568  Bacteria  normal  0.96835  normal 
 
 
-
 
NC_012917  PC1_2609  methyl-accepting chemotaxis sensory transducer  64.35 
 
 
561 aa  390  1e-107  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1804  methyl-accepting chemotaxis sensory transducer  58.09 
 
 
562 aa  389  1e-106  Dickeya zeae Ech1591  Bacteria  normal  0.0522685  n/a   
 
 
-
 
NC_013421  Pecwa_1857  methyl-accepting chemotaxis sensory transducer  61.1 
 
 
561 aa  387  1e-106  Pectobacterium wasabiae WPP163  Bacteria  normal  0.769355  n/a   
 
 
-
 
NC_012917  PC1_2617  methyl-accepting chemotaxis sensory transducer  65.99 
 
 
573 aa  387  1e-106  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.38785  n/a   
 
 
-
 
CP001509  ECD_01378  methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor  52.76 
 
 
546 aa  383  1e-105  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2225  methyl-accepting chemotaxis sensory transducer  52.76 
 
 
546 aa  383  1e-105  Escherichia coli DH1  Bacteria  normal  0.213228  n/a   
 
 
-
 
NC_009801  EcE24377A_1600  methyl-accepting chemotaxis protein III  52.76 
 
 
546 aa  383  1e-105  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_2238  methyl-accepting chemotaxis sensory transducer  53 
 
 
546 aa  385  1e-105  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_01390  hypothetical protein  52.76 
 
 
546 aa  383  1e-105  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A1503  methyl-accepting chemotaxis protein III  53 
 
 
546 aa  384  1e-105  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_1753  methyl-accepting chemotaxis protein III  52.76 
 
 
546 aa  384  1e-105  Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  2.79367e-17 
 
 
-
 
NC_011353  ECH74115_2026  methyl-accepting chemotaxis protein III  61.36 
 
 
470 aa  379  1e-104  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  hitchhiker  0.000000214401 
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  59.78 
 
 
552 aa  381  1e-104  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
CP001509  ECD_04232  methyl-accepting chemotaxis protein I, serine sensor receptor  46.07 
 
 
551 aa  376  1e-103  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3642  methyl-accepting chemotaxis sensory transducer  45.8 
 
 
551 aa  376  1e-103  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2108  methyl-accepting chemotaxis sensory transducer  60 
 
 
556 aa  377  1e-103  Dickeya dadantii Ech703  Bacteria  normal  0.0190315  n/a   
 
 
-
 
NC_010498  EcSMS35_4900  methyl-accepting chemotaxis protein I  45.9 
 
 
554 aa  376  1e-103  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.979291 
 
 
-
 
NC_012892  B21_04198  hypothetical protein  46.07 
 
 
551 aa  376  1e-103  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3700  methyl-accepting chemotaxis sensory transducer  45.63 
 
 
554 aa  377  1e-103  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.125609 
 
 
-
 
NC_012880  Dd703_3458  methyl-accepting chemotaxis sensory transducer  48.61 
 
 
576 aa  377  1e-103  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_4947  methyl-accepting chemotaxis protein I  45.45 
 
 
554 aa  375  1e-102  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E4893  methyl-accepting chemotaxis protein I  45.9 
 
 
551 aa  373  1e-102  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A4586  methyl-accepting chemotaxis protein I  45.74 
 
 
557 aa  373  1e-102  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1838  methyl-accepting chemotaxis sensory transducer  56.99 
 
 
667 aa  374  1e-102  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A4786  methyl-accepting chemotaxis protein I  61.05 
 
 
553 aa  373  1e-102  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.709187  normal 
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  52.79 
 
 
661 aa  373  1e-102  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_5868  methyl-accepting chemotaxis protein I  45.72 
 
 
554 aa  375  1e-102  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_1631  methyl-accepting chemotaxis protein  57.22 
 
 
579 aa  372  1e-102  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2982  methyl-accepting chemotaxis sensory transducer  65.96 
 
 
541 aa  373  1e-102  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A4887  methyl-accepting chemotaxis protein I  61.05 
 
 
553 aa  375  1e-102  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A4946  methyl-accepting chemotaxis protein I  61.05 
 
 
553 aa  372  1e-102  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.556415 
 
 
-
 
NC_012880  Dd703_0562  methyl-accepting chemotaxis sensory transducer  57.78 
 
 
570 aa  374  1e-102  Dickeya dadantii Ech703  Bacteria  decreased coverage  0.00821394  n/a   
 
 
-
 
NC_011083  SeHA_C4939  methyl-accepting chemotaxis protein I  61.05 
 
 
553 aa  375  1e-102  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.188217  normal 
 
 
-
 
NC_010465  YPK_1742  methyl-accepting chemotaxis sensory transducer  57.22 
 
 
579 aa  372  1e-101  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A3949  methyl-accepting chemotaxis protein I  61.06 
 
 
547 aa  370  1e-101  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.748503  normal 
 
 
-
 
NC_009436  Ent638_2457  methyl-accepting chemotaxis sensory transducer  55.15 
 
 
555 aa  371  1e-101  Enterobacter sp. 638  Bacteria  normal  0.890786  normal 
 
 
-
 
NC_009436  Ent638_0513  methyl-accepting chemotaxis sensory transducer  63.53 
 
 
586 aa  369  1e-101  Enterobacter sp. 638  Bacteria  normal  hitchhiker  0.00498581 
 
 
-
 
NC_011094  SeSA_A3769  methyl-accepting chemotaxis protein I  61.06 
 
 
547 aa  369  1e-100  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1816  methyl-accepting chemotaxis sensory transducer  52.78 
 
 
651 aa  367  1e-100  Dickeya dadantii Ech703  Bacteria  normal  0.700193  n/a   
 
 
-
 
NC_012917  PC1_1159  methyl-accepting chemotaxis sensory transducer  62.14 
 
 
556 aa  368  1e-100  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A3846  methyl-accepting chemotaxis protein I  61.06 
 
 
547 aa  366  1e-100  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C3889  methyl-accepting chemotaxis protein I  61.06 
 
 
547 aa  369  1e-100  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3779  methyl-accepting chemotaxis protein  61.06 
 
 
547 aa  369  1e-100  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_0380  methyl-accepting chemotaxis sensory transducer  61.7 
 
 
549 aa  363  4e-99  Enterobacter sp. 638  Bacteria  normal  0.214895  normal 
 
 
-
 
NC_012880  Dd703_1806  methyl-accepting chemotaxis sensory transducer  52.52 
 
 
652 aa  363  5.0000000000000005e-99  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0523  methyl-accepting chemotaxis sensory transducer  60.27 
 
 
568 aa  361  2e-98  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_0080  methyl-accepting chemotaxis sensory transducer  49.65 
 
 
642 aa  359  7e-98  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_2086  methyl-accepting chemotaxis sensory transducer  54.38 
 
 
653 aa  359  8e-98  Dickeya zeae Ech1591  Bacteria  normal  0.0240769  n/a   
 
 
-
 
NC_012880  Dd703_2081  methyl-accepting chemotaxis sensory transducer  60.62 
 
 
668 aa  359  8e-98  Dickeya dadantii Ech703  Bacteria  normal  0.622232  n/a   
 
 
-
 
NC_010498  EcSMS35_1298  methyl-accepting chemotaxis protein II  52.5 
 
 
553 aa  358  9.999999999999999e-98  Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  0.00038087 
 
 
-
 
NC_011149  SeAg_B1203  methyl-accepting chemotaxis protein II  61.99 
 
 
553 aa  357  1.9999999999999998e-97  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.697919  n/a   
 
 
-
 
NC_012917  PC1_4161  methyl-accepting chemotaxis sensory transducer  63.49 
 
 
628 aa  358  1.9999999999999998e-97  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A2079  methyl-accepting chemotaxis protein II  61.16 
 
 
553 aa  357  2.9999999999999997e-97  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.429347  hitchhiker  1.96177e-16 
 
 
-
 
NC_009801  EcE24377A_2119  methyl-accepting chemotaxis protein II  60.34 
 
 
553 aa  357  2.9999999999999997e-97  Escherichia coli E24377A  Bacteria  normal  0.0158521  n/a   
 
 
-
 
NC_011083  SeHA_C2134  methyl-accepting chemotaxis protein II  61.7 
 
 
553 aa  357  2.9999999999999997e-97  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  1.16019e-17 
 
 
-
 
NC_011094  SeSA_A2074  methyl-accepting chemotaxis protein II  61.7 
 
 
553 aa  357  3.9999999999999996e-97  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.162752  hitchhiker  0.000345874 
 
 
-
 
NC_011205  SeD_A1326  methyl-accepting chemotaxis protein II  61.7 
 
 
553 aa  357  3.9999999999999996e-97  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.452066  hitchhiker  2.3261e-17 
 
 
-
 
CP001509  ECD_01857  methyl-accepting chemotaxis protein II  60.34 
 
 
553 aa  356  5e-97  Escherichia coli BL21(DE3)  Bacteria  normal  0.13191  n/a   
 
 
-
 
CP001637  EcDH1_1754  methyl-accepting chemotaxis sensory transducer  60.34 
 
 
553 aa  356  5e-97  Escherichia coli DH1  Bacteria  normal  0.0705276  n/a   
 
 
-
 
NC_011353  ECH74115_2624  methyl-accepting chemotaxis protein II  60.34 
 
 
553 aa  356  5e-97  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.784316  hitchhiker  0.00000000183949 
 
 
-
 
NC_009800  EcHS_A1982  methyl-accepting chemotaxis protein II  60.34 
 
 
553 aa  356  5e-97  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1746  methyl-accepting chemotaxis sensory transducer  60.34 
 
 
553 aa  356  5e-97  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_01846  hypothetical protein  60.34 
 
 
553 aa  356  5e-97  Escherichia coli BL21  Bacteria  normal  0.186429  n/a   
 
 
-
 
NC_013421  Pecwa_4443  methyl-accepting chemotaxis sensory transducer  65.17 
 
 
630 aa  353  5e-96  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0055  methyl-accepting chemotaxis sensory transducer  59.81 
 
 
628 aa  350  3e-95  Dickeya zeae Ech1591  Bacteria  normal  0.608397  n/a   
 
 
-
 
NC_009832  Spro_1415  methyl-accepting chemotaxis sensory transducer  57.46 
 
 
546 aa  350  5e-95  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
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