Gene Dd1591_0055 details

Gene Information

• Locus tag: Dd1591_0055
• ID: 8119000
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: -
• Start bp: 64373
• End bp: 66259
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 644850436
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_003002427
• Protein GI: 251787706
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.608397
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTATAA AACTCGAAAA TATCAAAGTC GGCAGGAAGT TAGGATTAGG GTTTTCCCTG 
ATTCTGCTAC TGACCGTTAT CATTGCCGCC GTGAGTGTTC GCTATATCGA AACACTGAAA 
GGGCGTTTTG AAAAAGTTAT TTTTAGCAAC CAAATTAATA ATGAGGTGAG TGAAGCCCGT 
TATTATCGGT TGCTATACGG CACCAGTTAT AACCCGGATA GTCTTAAAGA GAATAGTAAA 
CACATTGATA ACATCATCGG GTTAATATCT TCTATTCAGG GTAAAAACTG GCGAAGCGAT 
TACGACGAGC GGCTGGATAA TATCAATAAG TTGATTAACC AGTATAAAGA ACGGCGGAAA 
AACTATACCG ACGCCGTCGC CAAAAAAGAT GACGTCAGAA AAAGCTGGAA CCTGTCCGAT 
TCTGAAAAGC CGCTCAAGCA AATAGAACAG CAGGTAGCCG GCAATATGCC TTTGCAGTTG 
CAACTGACCT CACTGCACCA GAAACTGGTT AACGTCCGCT ATCTGGTGCG CGGCCTGTTG 
TTATCGTTGA ACAGCGACTC GGAAAAACCG CTGATTAGCG CACTGGATGA CGCGCAAAAA 
GCGCTTGGCC AATTCGTCCA GGCACTGACG CCGGAACAGC AAGCGATTAT GGCGCCGGTT 
GTTTCTACGC TGTCGACGTA TAAAACGCAG GTCATGGCTT ATCTGCCGGC TTATCAGGAA 
GAAATGGCGC AAGGTAAGTT GCTGGGCGAT ACCGCCAATC TGCTTATCGA CAACGTCAAT 
AAGATGGTCG CCGAAGAAAC CGCCGCTACC CAGAACGATA TCATCACCGC CGAATGGCAG 
ATCGCCATCA CCTCGCTTAT CACGCTGATA CTCGGCGCGC TGATTGCCTG GTATATTTCC 
CGCCAAATCA CTCACCCCTT GAACAACACC GTGGCCATCG CCGAGAGTAT CGCCACCGGC 
GATTTGACCG TCGCCATTGA AACAACGCGC CGCGACGAAC TGGGCATGTT GTTTAGCGCC 
ATGGCAAAAA TGAAGGCCAA TCTGCATAAC ATGATTGACG ATATTCGTAT GGGGGTCAGC 
CAGATTACTA CCGCCGCCAG CGAAATCGTC ACCGGTAATA ACGATCTGGC CGCGCGTACC 
GAATCTCAGG CGGCGTCCGT TGAAGAAACC GCCGCCAGCA TGGAAGAACT CACGTCCACC 
GTGAAACAAA ACGCCGCCAA CGCGCACCAA GCCAATAAAC TGGTGTTGGA TGCCACGCAT 
ACGGCGCAGG AAGGCGGTAA GCTGGTCGCT GATGTGGTGC AAACCATGTC CGATATTGAA 
GGCAGTTCCA AACGTATTGC GGAAATCACC TCCGTTATCA ACGGTATTGC CTTCCAAACC 
AATATTCTGG CGCTGAACGC AGCGGTGGAA GCGGCGCGGG CGGGTGAGCA AGGGCGTGGT 
TTCGCCGTGG TTGCCAATGA AGTGCGTAAT CTGGCTCAGC GCAGTTCGCA GGCAGCCAAA 
GAGATTGAAG GCTTGATCTC CACCTCGGTC GGGCAGGTCT CGAAAGGGGC GAATCTGGTT 
CACTCGGCGG GTAAAACCAT GCAGGAGATT GTGACTGCGG TAACGCATGT ACACGACATC 
ATGGGTGAAA TTACGATTGC GTCCGACGAG CAAAGCCGCG GTATCGCTCA GGTCAATCAG 
GCGATTGTCG AGATGGACAG CACCACCCAA CAAAACGCCG CACTGGTGCA GCAGTCTTCT 
GCGGCAGCCA GCTCACTGGA AGACCAGGCC ATGATACTCT CCAATACGGT ATCGGCTTTC 
CGTCTCTCCT CTTCCCACGA ACTGGCGCCT GCCAGTCACG GTTTGCCGTT CGCCGGCCAC 
CAGCAACAGT TATCTTATAA GCATTAA 

 

Protein sequence

MAIKLENIKV GRKLGLGFSL ILLLTVIIAA VSVRYIETLK GRFEKVIFSN QINNEVSEAR 
YYRLLYGTSY NPDSLKENSK HIDNIIGLIS SIQGKNWRSD YDERLDNINK LINQYKERRK 
NYTDAVAKKD DVRKSWNLSD SEKPLKQIEQ QVAGNMPLQL QLTSLHQKLV NVRYLVRGLL 
LSLNSDSEKP LISALDDAQK ALGQFVQALT PEQQAIMAPV VSTLSTYKTQ VMAYLPAYQE 
EMAQGKLLGD TANLLIDNVN KMVAEETAAT QNDIITAEWQ IAITSLITLI LGALIAWYIS 
RQITHPLNNT VAIAESIATG DLTVAIETTR RDELGMLFSA MAKMKANLHN MIDDIRMGVS 
QITTAASEIV TGNNDLAART ESQAASVEET AASMEELTST VKQNAANAHQ ANKLVLDATH 
TAQEGGKLVA DVVQTMSDIE GSSKRIAEIT SVINGIAFQT NILALNAAVE AARAGEQGRG 
FAVVANEVRN LAQRSSQAAK EIEGLISTSV GQVSKGANLV HSAGKTMQEI VTAVTHVHDI 
MGEITIASDE QSRGIAQVNQ AIVEMDSTTQ QNAALVQQSS AAASSLEDQA MILSNTVSAF 
RLSSSHELAP ASHGLPFAGH QQQLSYKH