| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4900 |
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| Symbol | tsr |
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| ID | 6147169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 5019981 |
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| End bp | 5021645 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641619703 |
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| Product | methyl-accepting chemotaxis protein I |
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| Protein accession | YP_001746810 |
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| Protein GI | 170682951 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.979291 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAAAC GTATCAAGAT CGTGACCAGC TTACTGCTGG TTTTGGCCGT TTTTGGCCTT
TTACAACTGA CATCAGGCGG TCTGTTCTTT AATGCCTTAA AGAATGACAA AGAAAATTTC
ACTGTTTTAC AAACCATTCG CCAGCAGCAA TCCACGCTGA ATGGCAGCTG GGTCGCGTTG
TTGCAGACGC GTAACACCCT CAACCGCGCG GGTATCCGCT ACATGATGGA TCAGAATAAT
ATTGGTAGCG GTTCAACCGT TGCTGAGCTG ATGCAGAGTG CCAGTATTTC GCTGAAACAG
GCGGAAAAAA ACTGGGCGGA TTACGAAGCG TTGCCGCGTG ACCCGCGTCA GAGCACCGCC
GCAGCGGCAG AGATCAAACG TAATTACGAT ATTTATCACA ATGCGCTGGC GGAGCTGATC
CAACTGTTAG GTGCAGGCAA AATCAACGAG TTCTTTGATC AGCCAACCCA GGGATATCAG
GACGGTTTCG AGAAGCAGTA TGTGGCTTAC ATGGAGCAAA ACGATCGGCT CTATGATATC
GCCGTCAGCG ATAATAATGC CTCCTACAGC CAGGCGATGT GGATTCTGGT GGGCGTGATG
ATCGTCGTAC TGGCGGTCAT CTTCGCCGTC TGGTTCGGTA TTAAAGCCTC GTTGGTAGCG
CCAATGAATC GCCTGATTGA CAGCATTCGT CATATTGCAG GCGGCGATCT GGTGAAACCG
ATTGAGGTGG ATGGCTCTAA TGAGATGGGG CAACTGGCTG AGAGTTTGCG CCATATGCAG
GGAGAGCTGA TGCGTACCGT CGGTGATGTG CGCAACGGGG CCAATGCCAT CTATAGCGGT
GCCAGCGAAA TCGCTACCGG CAATAACGAT CTCTCTTCGC GCACCGAGCA ACAGGCCGCT
TCGCTGGAAG AGACGGCAGC CAGCATGGAG CAACTGACCG CAACGGTGAA GCAGAACGCC
GAAAATGCGC GCCAGGCCAG CCACCTGGCG TTAAGTGCTT CTGAAACGGC GCAACGCGGC
GGCAAAGTGG TGGATAACGT GGTGCAGACC ATGCGCGATA TCTCCACCAG TTCGCAGAAA
ATCGCCGATA TTATCAGCGT AATTGACGGC ATTGCCTTCC AGACCAATAT TCTCGCTTTG
AACGCGGCGG TTGAAGCAGC GCGCGCGGGT GAGCAAGGGC GCGGTTTTGC GGTGGTTGCG
GGAGAAGTGC GTAATCTGGC CCAGCGTAGC GCTCAGGCGG CTCGCGAAAT TAAAAGCCTG
ATTGAAGACT CGGTGGGCAA AGTGGATGTT GGCTCTACGC TGGTCGAAAG CGCCGGGGAA
ACCATGGCAG AGATTGTCAG CGCTGTGACC CGCGTGACGG ACATTATGGG CGAAATAGCT
TCTGCTTCTG ATGAGCAGAG CCGTGGTATC GATCAGGTTG GATTAGCGGT TGCTGAGATG
GACCGGGTAA CTCAACAGAA CGCTGCGCTG GTGGAAGAAT CTGCCGCTGC CGCCGCCGCG
CTGGAAGAGC AGGCCAGTCG CCTGACCGAA GCTGTGGCAG TGTTCCGGAT TCAGCAACAG
CAGCAACATC AGCGTGAAAC ATCGGCTGTG GTAAAAACCG TGACGCCAGC TGCGCCGCGT
AAAATGGCCG TGGCAGATAG CGGGGAGAAC TGGGAAACGT TTTAA
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| Protein sequence | MLKRIKIVTS LLLVLAVFGL LQLTSGGLFF NALKNDKENF TVLQTIRQQQ STLNGSWVAL
LQTRNTLNRA GIRYMMDQNN IGSGSTVAEL MQSASISLKQ AEKNWADYEA LPRDPRQSTA
AAAEIKRNYD IYHNALAELI QLLGAGKINE FFDQPTQGYQ DGFEKQYVAY MEQNDRLYDI
AVSDNNASYS QAMWILVGVM IVVLAVIFAV WFGIKASLVA PMNRLIDSIR HIAGGDLVKP
IEVDGSNEMG QLAESLRHMQ GELMRTVGDV RNGANAIYSG ASEIATGNND LSSRTEQQAA
SLEETAASME QLTATVKQNA ENARQASHLA LSASETAQRG GKVVDNVVQT MRDISTSSQK
IADIISVIDG IAFQTNILAL NAAVEAARAG EQGRGFAVVA GEVRNLAQRS AQAAREIKSL
IEDSVGKVDV GSTLVESAGE TMAEIVSAVT RVTDIMGEIA SASDEQSRGI DQVGLAVAEM
DRVTQQNAAL VEESAAAAAA LEEQASRLTE AVAVFRIQQQ QQHQRETSAV VKTVTPAAPR
KMAVADSGEN WETF
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