More than 300 homologs were found in PanDaTox collection
for query gene PC1_1384 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012912  Dd1591_2406  methyl-accepting chemotaxis sensory transducer  57.07 
 
 
559 aa  655    Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1782  methyl-accepting chemotaxis sensory transducer  90.7 
 
 
559 aa  1025    Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1384  methyl-accepting chemotaxis sensory transducer  100 
 
 
559 aa  1147    Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2307  methyl-accepting chemotaxis sensory transducer  57.55 
 
 
558 aa  628  1e-179  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2308  methyl-accepting chemotaxis sensory transducer  53.74 
 
 
560 aa  588  1e-167  Dickeya dadantii Ech703  Bacteria  normal  0.52721  n/a   
 
 
-
 
NC_012912  Dd1591_2407  methyl-accepting chemotaxis sensory transducer  52.22 
 
 
555 aa  574  1.0000000000000001e-162  Dickeya zeae Ech1591  Bacteria  normal  0.880863  n/a   
 
 
-
 
NC_012912  Dd1591_2408  methyl-accepting chemotaxis sensory transducer  50.98 
 
 
557 aa  549  1e-155  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1669  methyl-accepting chemotaxis sensory transducer  51.8 
 
 
560 aa  545  1e-153  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1940  methyl-accepting chemotaxis sensory transducer  52.84 
 
 
560 aa  543  1e-153  Pectobacterium wasabiae WPP163  Bacteria  normal  0.364705  n/a   
 
 
-
 
NC_012917  PC1_1208  methyl-accepting chemotaxis sensory transducer  43.52 
 
 
555 aa  439  9.999999999999999e-123  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000392698  n/a   
 
 
-
 
NC_012880  Dd703_2509  methyl-accepting chemotaxis sensory transducer  45.09 
 
 
557 aa  427  1e-118  Dickeya dadantii Ech703  Bacteria  normal  0.377261  n/a   
 
 
-
 
NC_013421  Pecwa_3123  methyl-accepting chemotaxis sensory transducer  42.98 
 
 
555 aa  427  1e-118  Pectobacterium wasabiae WPP163  Bacteria  decreased coverage  0.000142041  n/a   
 
 
-
 
NC_012912  Dd1591_2409  methyl-accepting chemotaxis sensory transducer  45.83 
 
 
539 aa  417  9.999999999999999e-116  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_3407  methyl-accepting chemotaxis sensory transducer  44.03 
 
 
545 aa  413  1e-114  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_2937  methyl-accepting chemotaxis sensory transducer  42.15 
 
 
564 aa  400  9.999999999999999e-111  Dickeya zeae Ech1591  Bacteria  normal  0.0948744  n/a   
 
 
-
 
NC_012880  Dd703_1119  methyl-accepting chemotaxis sensory transducer  41.73 
 
 
561 aa  394  1e-108  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A3501  methyl-accepting chemotaxis sensory transducer  42.07 
 
 
547 aa  385  1e-106  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.601659  normal 
 
 
-
 
NC_011083  SeHA_C3400  methyl-accepting chemotaxis sensory transducer  42.12 
 
 
547 aa  389  1e-106  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.779493 
 
 
-
 
NC_011149  SeAg_B3326  methyl-accepting chemotaxis sensory transducer  41.92 
 
 
547 aa  387  1e-106  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A3335  methyl-accepting chemotaxis sensory transducer  40.99 
 
 
547 aa  387  1e-106  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.499063 
 
 
-
 
NC_011080  SNSL254_A3406  methyl-accepting chemotaxis sensory transducer  40.99 
 
 
547 aa  386  1e-106  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_0395  methyl-accepting chemotaxis sensory transducer  39.75 
 
 
556 aa  375  1e-102  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3679  methyl-accepting chemotaxis sensory transducer  39.72 
 
 
567 aa  352  1e-95  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3873  methyl-accepting chemotaxis sensory transducer  39.65 
 
 
575 aa  348  2e-94  Pectobacterium wasabiae WPP163  Bacteria  normal  0.460221  n/a   
 
 
-
 
NC_012912  Dd1591_3580  methyl-accepting chemotaxis sensory transducer  37.86 
 
 
572 aa  331  2e-89  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2457  methyl-accepting chemotaxis sensory transducer  39.86 
 
 
555 aa  325  1e-87  Enterobacter sp. 638  Bacteria  normal  0.890786  normal 
 
 
-
 
NC_013421  Pecwa_1849  methyl-accepting chemotaxis sensory transducer  49.47 
 
 
570 aa  325  2e-87  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A3949  methyl-accepting chemotaxis protein I  52.12 
 
 
547 aa  325  2e-87  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.748503  normal 
 
 
-
 
NC_011353  ECH74115_2026  methyl-accepting chemotaxis protein III  53.56 
 
 
470 aa  322  9.999999999999999e-87  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  hitchhiker  0.000000214401 
 
 
-
 
NC_011094  SeSA_A3769  methyl-accepting chemotaxis protein I  51.84 
 
 
547 aa  322  1.9999999999999998e-86  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C3889  methyl-accepting chemotaxis protein I  51.84 
 
 
547 aa  321  1.9999999999999998e-86  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_1753  methyl-accepting chemotaxis protein III  53.56 
 
 
546 aa  322  1.9999999999999998e-86  Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  2.79367e-17 
 
 
-
 
NC_007951  Bxe_A0121  methyl-accepting chemotaxis sensory transducer  39.27 
 
 
618 aa  320  3e-86  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.487659 
 
 
-
 
NC_011080  SNSL254_A3846  methyl-accepting chemotaxis protein I  51.84 
 
 
547 aa  320  3e-86  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_1600  methyl-accepting chemotaxis protein III  53.73 
 
 
546 aa  320  3e-86  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_01378  methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor  53.73 
 
 
546 aa  320  3.9999999999999996e-86  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2225  methyl-accepting chemotaxis sensory transducer  53.73 
 
 
546 aa  320  3.9999999999999996e-86  Escherichia coli DH1  Bacteria  normal  0.213228  n/a   
 
 
-
 
NC_012892  B21_01390  hypothetical protein  53.73 
 
 
546 aa  320  3.9999999999999996e-86  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  51.64 
 
 
552 aa  320  6e-86  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_012880  Dd703_1507  methyl-accepting chemotaxis sensory transducer  51.24 
 
 
573 aa  319  7.999999999999999e-86  Dickeya dadantii Ech703  Bacteria  normal  0.273861  n/a   
 
 
-
 
NC_009832  Spro_2982  methyl-accepting chemotaxis sensory transducer  49.74 
 
 
541 aa  319  7.999999999999999e-86  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1804  methyl-accepting chemotaxis sensory transducer  48.08 
 
 
562 aa  319  7.999999999999999e-86  Dickeya zeae Ech1591  Bacteria  normal  0.0522685  n/a   
 
 
-
 
NC_009800  EcHS_A1503  methyl-accepting chemotaxis protein III  53.42 
 
 
546 aa  318  1e-85  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_2238  methyl-accepting chemotaxis sensory transducer  53.42 
 
 
546 aa  318  1e-85  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3779  methyl-accepting chemotaxis protein  51.56 
 
 
547 aa  318  1e-85  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1159  methyl-accepting chemotaxis sensory transducer  52.87 
 
 
556 aa  317  2e-85  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_1298  methyl-accepting chemotaxis protein II  41.86 
 
 
553 aa  318  2e-85  Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  0.00038087 
 
 
-
 
NC_012912  Dd1591_1535  methyl-accepting chemotaxis sensory transducer  51.07 
 
 
574 aa  318  2e-85  Dickeya zeae Ech1591  Bacteria  normal  0.241891  n/a   
 
 
-
 
NC_009436  Ent638_2456  methyl-accepting protein IV  51.2 
 
 
533 aa  318  2e-85  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  48.5 
 
 
562 aa  316  6e-85  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  48.27 
 
 
661 aa  314  1.9999999999999998e-84  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  39.89 
 
 
566 aa  313  3.9999999999999997e-84  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_011353  ECH74115_2623  methyl-accepting protein IV  51.7 
 
 
533 aa  313  3.9999999999999997e-84  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  hitchhiker  0.0000000448067 
 
 
-
 
NC_010658  SbBS512_E2178  methyl-accepting protein IV  51.7 
 
 
533 aa  313  4.999999999999999e-84  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_01856  methyl-accepting protein IV  51.7 
 
 
533 aa  313  6.999999999999999e-84  Escherichia coli BL21(DE3)  Bacteria  normal  0.293195  n/a   
 
 
-
 
NC_012892  B21_01845  hypothetical protein  51.7 
 
 
533 aa  313  6.999999999999999e-84  Escherichia coli BL21  Bacteria  normal  0.282402  n/a   
 
 
-
 
NC_009436  Ent638_1961  methyl-accepting chemotaxis sensory transducer  52.12 
 
 
563 aa  313  6.999999999999999e-84  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  50.43 
 
 
557 aa  312  7.999999999999999e-84  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  50.43 
 
 
557 aa  312  7.999999999999999e-84  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_1299  methyl-accepting protein IV  51.39 
 
 
533 aa  312  9e-84  Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  0.00139959 
 
 
-
 
NC_011149  SeAg_B1531  methyl-accepting chemotaxis protein III  53.15 
 
 
541 aa  311  1e-83  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A1740  methyl-accepting chemotaxis protein III  53.15 
 
 
541 aa  311  1e-83  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
CP001637  EcDH1_1755  methyl-accepting chemotaxis sensory transducer  51.39 
 
 
533 aa  311  2e-83  Escherichia coli DH1  Bacteria  normal  0.0930328  n/a   
 
 
-
 
NC_011083  SeHA_C1804  methyl-accepting chemotaxis protein III  53.15 
 
 
535 aa  311  2e-83  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A1716  methyl-accepting chemotaxis protein III  53.15 
 
 
541 aa  311  2e-83  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.0288519 
 
 
-
 
NC_011094  SeSA_A1744  methyl-accepting chemotaxis protein III  53.15 
 
 
535 aa  311  2e-83  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.693576  normal  0.460124 
 
 
-
 
NC_010468  EcolC_1747  methyl-accepting protein IV  51.39 
 
 
533 aa  311  2e-83  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  50.43 
 
 
557 aa  311  2e-83  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_012880  Dd703_1806  methyl-accepting chemotaxis sensory transducer  48.02 
 
 
652 aa  311  2.9999999999999997e-83  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A1981  methyl-accepting protein IV  51.08 
 
 
533 aa  310  5e-83  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0562  methyl-accepting chemotaxis sensory transducer  51.61 
 
 
570 aa  310  5.9999999999999995e-83  Dickeya dadantii Ech703  Bacteria  decreased coverage  0.00821394  n/a   
 
 
-
 
NC_013421  Pecwa_3172  methyl-accepting chemotaxis sensory transducer  54.15 
 
 
556 aa  309  6.999999999999999e-83  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_4454  methyl-accepting chemotaxis sensory transducer  40.31 
 
 
653 aa  309  6.999999999999999e-83  Pectobacterium wasabiae WPP163  Bacteria  normal  0.625525  n/a   
 
 
-
 
NC_010681  Bphyt_3813  methyl-accepting chemotaxis sensory transducer  40.32 
 
 
617 aa  309  6.999999999999999e-83  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1816  methyl-accepting chemotaxis sensory transducer  48.91 
 
 
651 aa  308  1.0000000000000001e-82  Dickeya dadantii Ech703  Bacteria  normal  0.700193  n/a   
 
 
-
 
NC_010465  YPK_0034  methyl-accepting chemotaxis sensory transducer  48.54 
 
 
649 aa  308  2.0000000000000002e-82  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.38678  n/a   
 
 
-
 
NC_009708  YpsIP31758_4122  methyl-accepting chemotaxis protein  48.54 
 
 
649 aa  308  2.0000000000000002e-82  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_2118  methyl-accepting protein IV  51.08 
 
 
533 aa  308  2.0000000000000002e-82  Escherichia coli E24377A  Bacteria  normal  0.142053  n/a   
 
 
-
 
NC_009832  Spro_2983  methyl-accepting chemotaxis sensory transducer  49.87 
 
 
556 aa  307  3e-82  Serratia proteamaculans 568  Bacteria  normal  0.96835  normal 
 
 
-
 
NC_011094  SeSA_A2074  methyl-accepting chemotaxis protein II  51.71 
 
 
553 aa  307  3e-82  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.162752  hitchhiker  0.000345874 
 
 
-
 
NC_011205  SeD_A1326  methyl-accepting chemotaxis protein II  51.71 
 
 
553 aa  307  4.0000000000000004e-82  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.452066  hitchhiker  2.3261e-17 
 
 
-
 
NC_012912  Dd1591_0523  methyl-accepting chemotaxis sensory transducer  50.53 
 
 
568 aa  307  4.0000000000000004e-82  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C2134  methyl-accepting chemotaxis protein II  51.71 
 
 
553 aa  307  4.0000000000000004e-82  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  1.16019e-17 
 
 
-
 
NC_010159  YpAngola_A3774  methyl-accepting chemotaxis protein  55.27 
 
 
649 aa  306  7e-82  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B1203  methyl-accepting chemotaxis protein II  51.43 
 
 
553 aa  305  1.0000000000000001e-81  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.697919  n/a   
 
 
-
 
NC_013421  Pecwa_1857  methyl-accepting chemotaxis sensory transducer  48.14 
 
 
561 aa  305  1.0000000000000001e-81  Pectobacterium wasabiae WPP163  Bacteria  normal  0.769355  n/a   
 
 
-
 
CP001509  ECD_01857  methyl-accepting chemotaxis protein II  53.99 
 
 
553 aa  305  2.0000000000000002e-81  Escherichia coli BL21(DE3)  Bacteria  normal  0.13191  n/a   
 
 
-
 
CP001637  EcDH1_1754  methyl-accepting chemotaxis sensory transducer  53.99 
 
 
553 aa  305  2.0000000000000002e-81  Escherichia coli DH1  Bacteria  normal  0.0705276  n/a   
 
 
-
 
NC_010468  EcolC_1746  methyl-accepting chemotaxis sensory transducer  53.99 
 
 
553 aa  305  2.0000000000000002e-81  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_01846  hypothetical protein  53.99 
 
 
553 aa  305  2.0000000000000002e-81  Escherichia coli BL21  Bacteria  normal  0.186429  n/a   
 
 
-
 
NC_012917  PC1_2617  methyl-accepting chemotaxis sensory transducer  49.08 
 
 
573 aa  304  2.0000000000000002e-81  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.38785  n/a   
 
 
-
 
NC_009800  EcHS_A1982  methyl-accepting chemotaxis protein II  53.99 
 
 
553 aa  305  2.0000000000000002e-81  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1742  methyl-accepting chemotaxis sensory transducer  47.33 
 
 
579 aa  304  3.0000000000000004e-81  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_2119  methyl-accepting chemotaxis protein II  53.99 
 
 
553 aa  304  3.0000000000000004e-81  Escherichia coli E24377A  Bacteria  normal  0.0158521  n/a   
 
 
-
 
NC_011080  SNSL254_A2079  methyl-accepting chemotaxis protein II  52.33 
 
 
553 aa  304  3.0000000000000004e-81  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.429347  hitchhiker  1.96177e-16 
 
 
-
 
NC_011353  ECH74115_2624  methyl-accepting chemotaxis protein II  53.99 
 
 
553 aa  304  3.0000000000000004e-81  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.784316  hitchhiker  0.00000000183949 
 
 
-
 
NC_007510  Bcep18194_A3360  methyl-accepting chemotaxis sensory transducer  38.39 
 
 
655 aa  303  5.000000000000001e-81  Burkholderia sp. 383  Bacteria  normal  0.139099  normal 
 
 
-
 
NC_009708  YpsIP31758_1631  methyl-accepting chemotaxis protein  47.33 
 
 
579 aa  303  5.000000000000001e-81  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1643  methyl-accepting chemotaxis protein  40.42 
 
 
536 aa  302  1e-80  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3517  methyl-accepting chemotaxis protein  40.42 
 
 
536 aa  302  1e-80  Yersinia pestis Angola  Bacteria  normal  normal  0.549342 
 
 
-
 
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