Gene YpsIP31758_4122 details

Gene Information

• Locus tag: YpsIP31758_4122
• ID: 5386194
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 4653065
• End bp: 4655014
• Gene Length: 1950 bp
• Protein Length: 649 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640867151
• Product: methyl-accepting chemotaxis protein
• Protein accession: YP_001403065
• Protein GI: 153949421
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 43
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGTAT TTAGCAAAAT TATTGGCAGC TTTGATAACG TAAAAGTCGG AAAAAAATTG 
GGTTTAAGTT TTTTCCTAAT GTTGCTATTG GTCGGGGTCA TTGCGGGCAC CACCGCTTAT 
CACTTCTCCG TGATCGAAGA ACATGCATAT AAAGTGGAGT TGAGCTACAA AATCAACAAC 
GAAGCGAATC AGGCAAAATA TAACCGCGCA CTTTATGAAC GTACCTATGA CCTGAAATAC 
ATCACAGAAA ACACACAGCA CATCAATAAT ATAAAAAATT TACTGACCCA AAGTGCAAAT 
CTCCGCTGGT CAGTTGATAA CCGCAAAAAT ATTGCCAACA TTAATCATGT CGTTGAGGAG 
TACCAGCAAC AACAGACGAA CTTTGTGAAT GCGGTGACCA ATAAAGATAA AGTGCGTCAA 
AGCTGGAGCA TCTCTGAAAG CCTAAATAAT ATCAATGCAC TACAGCAAAG CCTGCTTAAT 
GAAGGGGCCG ATACCAATAC GCAGATATTG CTAGCAGAAA TGAGCCAAAA ATTAATGACG 
GTGCGTTACA ACGCGCGCGG TTTATTACTG GATCGCAATA AAGATGCCGA AACTGCACTG 
ATAACCTCAA TTAACATTGC CAACAGTGCC GCGAATGCTT TCATGCCTGT GTTATCTGCC 
GAGCAGCAGA AACTATTAGC ACCGGTTGCC GCTAACCTAG CCCTCTATAA AGACAACGTT 
CTGGCCTATT TACCGGCTTA TCAGCAAGAA CTGGAGGTCG GTAAAGTGAT GGAGGCCAGT 
GCGAATGCAT TGAATACGTT GGCCACCCAA CTGTTTACCC AAGAGTTGCA AGGTACGCAC 
AACGAGATTA ACAATGCCCA GTACCAACTC GCTATTGCGG CTTTTGTGGC CTTACTTTTG 
GGGCTATTGA TCGCCTGGCG CATGACCCGT CAAATTACCG TGCCTCTACG TGCCACACTG 
GATATGGCAG AACGTATTGC CACTGGCGAT TTAACCGCGG CAACCACATC ATCCCGTACC 
GACGAACTGG GCATGTTGAT GAATGCCGTC GCCCGCATGA ATGAAAATCT GCGTGCCATG 
ATTGATGAAA TCCGCATTGG TGTCAGCCAG GTATCCCATG CCTCTGGTGA GATTGCCGCT 
GGCAATACTG ATTTATCGTC CCGTACCGAG CAACAAGCCG CCGCCGTAGA AGAAACCGCC 
GCCAGCATGG AACAATTAAA CGCCACAGTA AAACAGAACA CGGATAACGC TCATCACGCC 
AATCAATTGG CCACCGAGGC CTCGCAGACC GCACAACAGG GCGGTAAGCT GGTCAATGAT 
GTAGTGCGCA CCATGAATGA TATCTCTGGC AGTTCCAAAC GTATTTCTGA AATCACCTCC 
GTGATTAACA GCATCGCTTT CCAGACCAAT ATTTTGGCGC TGAATGCCGC CGTTGAAGCG 
GCCCGGGCGG GTGAACAAGG CCGTGGTTTT GCGGTAGTCG CCAGTGAGGT CAGAAATCTG 
GCGCAACGTA GTGCGCAGGC TGCTAAAGAA ATTGAAGGGC TGATTGGCGA GTCTGTTTCT 
CAGGTTAATG CCGGAACATC GCTGGTGAAA AATGCCGGTA ACACCATGGA GGAGATTGTC 
CGCTCCGTGA GCCACGTGCG CGATATCATG GCGGAAATCG CCTCAGCATC TGATGAACAA 
AGCCGTGGTA TCACCCAAGT TAGCTTGGCT ATCTCAGAAA TGGACAGTAC CACACAGCAA 
AATGCGGCCT TGGTGGAAGA ATCCGCCGCC GCCGCTGACT CACTGGCTGA GCAGGCCATC 
TTGCTGGCTC AGGCTGTGGC GGTGTTTCGG CTATCTGAAG ATGAAGGCGC GACAGATGAA 
GGCCGTGTTG TGACGCCAAA AGCCTCTAAC GGGCGTCATA CGCCAGAAGA CCATCGGATC 
AACCAGCAGA AGAGCTGGGA AACGTTCTAA 

 

Protein sequence

MAVFSKIIGS FDNVKVGKKL GLSFFLMLLL VGVIAGTTAY HFSVIEEHAY KVELSYKINN 
EANQAKYNRA LYERTYDLKY ITENTQHINN IKNLLTQSAN LRWSVDNRKN IANINHVVEE 
YQQQQTNFVN AVTNKDKVRQ SWSISESLNN INALQQSLLN EGADTNTQIL LAEMSQKLMT 
VRYNARGLLL DRNKDAETAL ITSINIANSA ANAFMPVLSA EQQKLLAPVA ANLALYKDNV 
LAYLPAYQQE LEVGKVMEAS ANALNTLATQ LFTQELQGTH NEINNAQYQL AIAAFVALLL 
GLLIAWRMTR QITVPLRATL DMAERIATGD LTAATTSSRT DELGMLMNAV ARMNENLRAM 
IDEIRIGVSQ VSHASGEIAA GNTDLSSRTE QQAAAVEETA ASMEQLNATV KQNTDNAHHA 
NQLATEASQT AQQGGKLVND VVRTMNDISG SSKRISEITS VINSIAFQTN ILALNAAVEA 
ARAGEQGRGF AVVASEVRNL AQRSAQAAKE IEGLIGESVS QVNAGTSLVK NAGNTMEEIV 
RSVSHVRDIM AEIASASDEQ SRGITQVSLA ISEMDSTTQQ NAALVEESAA AADSLAEQAI 
LLAQAVAVFR LSEDEGATDE GRVVTPKASN GRHTPEDHRI NQQKSWETF