Gene EcHS_A1981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1981 
Symboltap 
ID5593175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1988554 
End bp1990155 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content53% 
IMG OID640921126 
Productmethyl-accepting protein IV 
Protein accessionYP_001458675 
Protein GI157161357 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAATC GTATTCGAAT TTCGACCACG CTGTTTTTAA TTTTGATTCT CTGCGGGATC 
TTGCAGATTG GCAGTAACGG CATGTCTTTT TGGGCATTTC GCGACGATTT GCAACGACTG
AATCAGGTCG AGCAGAGCAA TCAGCAACGT GCGGCATTAG CGCAAACTCG GGCGGTAATG
TTACAGGCCA GTACCGCGCT GAACAAAGCG GGCACTCTGA CGGCACTTAG CTATCCGGCG
GATGACATTA AAACGTTGAT GACGACGGCG CGCGCCAGTC TGACGCAATC CACCACGCTG
TTTAAAAGTT TTATGGCGAT GACTGCGGGC AACGAGCACG TCAGGGGATT GCAAAAAGAG
ACGGAGAAAA GTTTTGCCCG CTGGCACAAC GATCTCGAAC ATCAGGCGAC CTGGCTTGAA
AGTAATCAAC TTTCGGATTT CCTCACTGCG CCGGTGCAGG GATCACAGAA TGCGTTTGAC
GTTAACTTTG AGGCCTGGCA GCTGGAGATC AACCATGTGC TGGAAGCCGC CAGTGCGCAA
AGCCAGCGTA ACTATCAGAT TTCGGCACTG GTGTTTATCA GCATGATTAT TGTTGCGGCG
ATCTACATCA GCAGTGCGCT GTGGTGGACG CGCAAGATGA TTGTTCAACC ACTGGCCATT
ATCGGTAGCC ATTTTGACAG CATTGCTGCG GGTAATCTGG CGCGTCCGAT TGCGGTATAT
GGTCGTAATG AGATCACCGC CATTTTTGCC AGTCTGAAGA CCATGCAGCA GGCTTTGCGT
GGGACGGTAA GTGATGTGCG TAAGGGAAGC CAGGAGATGC ACATTGGTAT CGCGGAGATT
GTCGCAGGCA ATAACGATCT CTCAAGTCGT ACCGAACAGC AGGCGGCATC GCTGGCACAA
ACGGCCGCCA GTATGGAGCA ATTAACCGCC ACGGTAGGGC AAAACGCCGA TAACGCACGA
CAGGCGTCGG AACTGGCAAA AAATGCCGCG ACAACGGCGC AGGCGGGCGG TGTTCAGGTC
AGTACCATGA CTCACACCAT GCAGGAGATC GCCACCAGCT CGCAAAAAAT TGGCGACATT
ATCAGCGTTA TCGACGGAAT TGCTTTCCAG ACCAATATTC TGGCCCTGAA TGCGGCAGTG
GAAGCGGCTC GCGCCGGAGA GCAGGGGCGT GGTTTTGCGG TAGTGGCAGG TGAAGTGCGC
AATCTTGCCA GCCGTAGCGC GCAGGCAGCA AAAGAGATCA AAGGGCTGAT CGAAGAGTCA
GTCAATCGTG TCCAGCAGGG TTCGAAACTG GTGAATAACG CCGCCGCGAC CATGATCGAT
ATTGTCAGTT CGGTGACCCG CGTGAACGAC ATTATGGGAG AAATTACCTC TGCGTCGGAA
GAACAACAGC GGGGGATTGA GCAGGTTGCA CAGGCTGTCA GCCAGATGGA TCAGGTGACT
CAGCAGAACG CCTCGCTGGT AGAAGAAGCG GCGGTGGCAA CGGAACAACT GGCGAATCAG
GCCGACCATC TTTCGTCGCG TGTGGCGGTA TTTACCCTTG AAGAACATGA AGTAGCACGA
CATGAGTCGG TGCAGTTACA AATTGCGCCA GTGGTATCCT GA
 
Protein sequence
MFNRIRISTT LFLILILCGI LQIGSNGMSF WAFRDDLQRL NQVEQSNQQR AALAQTRAVM 
LQASTALNKA GTLTALSYPA DDIKTLMTTA RASLTQSTTL FKSFMAMTAG NEHVRGLQKE
TEKSFARWHN DLEHQATWLE SNQLSDFLTA PVQGSQNAFD VNFEAWQLEI NHVLEAASAQ
SQRNYQISAL VFISMIIVAA IYISSALWWT RKMIVQPLAI IGSHFDSIAA GNLARPIAVY
GRNEITAIFA SLKTMQQALR GTVSDVRKGS QEMHIGIAEI VAGNNDLSSR TEQQAASLAQ
TAASMEQLTA TVGQNADNAR QASELAKNAA TTAQAGGVQV STMTHTMQEI ATSSQKIGDI
ISVIDGIAFQ TNILALNAAV EAARAGEQGR GFAVVAGEVR NLASRSAQAA KEIKGLIEES
VNRVQQGSKL VNNAAATMID IVSSVTRVND IMGEITSASE EQQRGIEQVA QAVSQMDQVT
QQNASLVEEA AVATEQLANQ ADHLSSRVAV FTLEEHEVAR HESVQLQIAP VVS