| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2617 |
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| Symbol | |
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| ID | 8133565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2984027 |
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| End bp | 2985748 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644865900 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_003018183 |
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| Protein GI | 253688993 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.38785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATGA AAATAACTTC AAGGTCTGAG CAGCACGTCG AGGCTGGCAT GCTGAGCAAT
TTACGGCTAG TTCCCTTATT CGTCATTATT CTGGGTGGAA TCATGCTGTT ATTTGCAGCA
TCTATCGGCA CATCCAGCTA CTTTCTGCAA AGCAGCAATC AGTCATTAGA CGACGTTACA
CAAGAAATTG ATACCCGAAT GGGGATCTCA AACAGCTCCA ACCACCTTCG TACTGCGCGT
CTGTTGCTCA TTCAGGCTGC GGCAGCTGCA CGTATCGGTG ACTCTCAGGT CTTCAATGAC
AACCTGAAGC AAGCTGAACA GCGGCTGGAA CAGTCAAAAA AAGCATTCCT TGTCTATGAA
GAGCGTCCAG TTAAAACGCC GCAGGATATG GCGTTGGACG ACGAACTGCG CAAATCTTAT
GATGCTTATG TGAATCAAGG TCTTATGTTA ATGCTCACTG CAGCAAAACA GGGGCTATTT
GAAGAAGTCA TCACTCTCGA ATCCGAAGAA ACCCGGGTTT TGGATTTGGC CTATAACAAA
TTTCTGTTAG AGGCTGTCGC TTACCGTACA CAAAGAGCGA AAGAATTAAA TGAAACTGCG
CAGAGAAACG CGCTACTCGG ATATTCGTTG ATGGGGGGCA GCTTTGCTCT GGCGACGATT
TTAACACTTC TGACCTTCTT CCTGCTGAGA GGTATTCTCA TCAAACCAAT GAATCAGTTG
GTCGCGAGAA TTCAGCGTAT TGCGCAAGGT GATCTGACTC AGATGTCAGA TCGTTATGGC
AGGAATGAAA TCGGTACACT AGCCAGCAAC GTTCAGCAAA TGCAATCTTC TCTGGTAACA
ACCGTCACTA CCGTTCGGGA AAGTGCAGAT TCTATTTATC AGGGTTCAAC GGAGATCTCA
TCAGGTAACA CAGACCTTTC CTCACGAACC GAGCAGCAAG CCGCCGCGCT TGAGCAGACC
GCAGCCAGCA TGGAGCAATT GACGGCAACG GTGAAGCAAA ACTCAGAAAA CGCACATCAC
GCAAGCCAGC TCGCAGCCAA TGCTTCTGGA AAAGCCAAAC AGGGTGGCGA GATCGTTGCA
AACGTCGTCA ATACGATGAA CAGTATTTCA GGTAGTTCAA AGAAAATCTC TGAAATTACC
AATGTCATTA ACAGCATTGC ATTCCAGACG AATATTCTCG CGCTAAATGC CGCAGTTGAA
GCTGCCAGAG CGGGAGAACA AGGTCGCGGT TTTGCCGTCG TCGCCAGTGA GGTTCGTAGC
CTCGCACAGC GTAGTGCACA AGCCGCAAAA GAGATTGAAA CGCTGATTTC CGAATCCGTC
AACCTGGTCA ACAGTGGTTC TATTCTGGTT GATAATGCAG GTCAGACAAT GAAAGAAATC
GTCGATGCGG TCACTAACGT CACAGATATC ATGGGGGAAA TTGCCTCTGC CTCTGACGAA
CAAAGCCGGG GAATCTCTCA GGTTGGCCAG GCGATATCTG AAATGGACAG CGTGACACAG
CAGAATGCTG CGCTTGTTCA GGAAGCCAGT GCAGCAGCAG CATCGCTGGA AGAGCAAGCC
GCGCTGCTGA CCCGCGCAGT TGCGACATTT AAGCTATCCG GCCATTTATC AGGTGCTCCT
TCAGCACCTG GTCGGCCGAA CGCTCTGGCC GCAAAAGATC GTTCCTCACT CGCCCTCCCC
CGTAAAACCA ATACGGAAAA CGGTAACTGG GAAACGTTCT AA
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| Protein sequence | MDMKITSRSE QHVEAGMLSN LRLVPLFVII LGGIMLLFAA SIGTSSYFLQ SSNQSLDDVT
QEIDTRMGIS NSSNHLRTAR LLLIQAAAAA RIGDSQVFND NLKQAEQRLE QSKKAFLVYE
ERPVKTPQDM ALDDELRKSY DAYVNQGLML MLTAAKQGLF EEVITLESEE TRVLDLAYNK
FLLEAVAYRT QRAKELNETA QRNALLGYSL MGGSFALATI LTLLTFFLLR GILIKPMNQL
VARIQRIAQG DLTQMSDRYG RNEIGTLASN VQQMQSSLVT TVTTVRESAD SIYQGSTEIS
SGNTDLSSRT EQQAAALEQT AASMEQLTAT VKQNSENAHH ASQLAANASG KAKQGGEIVA
NVVNTMNSIS GSSKKISEIT NVINSIAFQT NILALNAAVE AARAGEQGRG FAVVASEVRS
LAQRSAQAAK EIETLISESV NLVNSGSILV DNAGQTMKEI VDAVTNVTDI MGEIASASDE
QSRGISQVGQ AISEMDSVTQ QNAALVQEAS AAAASLEEQA ALLTRAVATF KLSGHLSGAP
SAPGRPNALA AKDRSSLALP RKTNTENGNW ETF
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