More than 300 homologs were found in PanDaTox collection
for query gene PC1_1669 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012880  Dd703_2308  methyl-accepting chemotaxis sensory transducer  59.5 
 
 
560 aa  671    Dickeya dadantii Ech703  Bacteria  normal  0.52721  n/a   
 
 
-
 
NC_012917  PC1_1669  methyl-accepting chemotaxis sensory transducer  100 
 
 
560 aa  1140    Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2407  methyl-accepting chemotaxis sensory transducer  58.29 
 
 
555 aa  642    Dickeya zeae Ech1591  Bacteria  normal  0.880863  n/a   
 
 
-
 
NC_013421  Pecwa_1940  methyl-accepting chemotaxis sensory transducer  92.86 
 
 
560 aa  1012    Pectobacterium wasabiae WPP163  Bacteria  normal  0.364705  n/a   
 
 
-
 
NC_012912  Dd1591_2406  methyl-accepting chemotaxis sensory transducer  54.85 
 
 
559 aa  609  1e-173  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2408  methyl-accepting chemotaxis sensory transducer  54.98 
 
 
557 aa  601  1e-170  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2307  methyl-accepting chemotaxis sensory transducer  54.53 
 
 
558 aa  578  1.0000000000000001e-163  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2509  methyl-accepting chemotaxis sensory transducer  55.18 
 
 
557 aa  574  1.0000000000000001e-162  Dickeya dadantii Ech703  Bacteria  normal  0.377261  n/a   
 
 
-
 
NC_012917  PC1_1384  methyl-accepting chemotaxis sensory transducer  52.98 
 
 
559 aa  552  1e-156  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1782  methyl-accepting chemotaxis sensory transducer  52.73 
 
 
559 aa  550  1e-155  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1208  methyl-accepting chemotaxis sensory transducer  51.06 
 
 
555 aa  550  1e-155  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000392698  n/a   
 
 
-
 
NC_013421  Pecwa_3123  methyl-accepting chemotaxis sensory transducer  51.49 
 
 
555 aa  538  1e-151  Pectobacterium wasabiae WPP163  Bacteria  decreased coverage  0.000142041  n/a   
 
 
-
 
NC_009436  Ent638_3407  methyl-accepting chemotaxis sensory transducer  49.73 
 
 
545 aa  512  1e-144  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_2937  methyl-accepting chemotaxis sensory transducer  51.58 
 
 
564 aa  514  1e-144  Dickeya zeae Ech1591  Bacteria  normal  0.0948744  n/a   
 
 
-
 
NC_012880  Dd703_1119  methyl-accepting chemotaxis sensory transducer  51.34 
 
 
561 aa  508  9.999999999999999e-143  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2409  methyl-accepting chemotaxis sensory transducer  52.89 
 
 
539 aa  501  1e-140  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C3400  methyl-accepting chemotaxis sensory transducer  48.05 
 
 
547 aa  485  1e-136  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.779493 
 
 
-
 
NC_011080  SNSL254_A3406  methyl-accepting chemotaxis sensory transducer  48.05 
 
 
547 aa  485  1e-136  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A3501  methyl-accepting chemotaxis sensory transducer  47.87 
 
 
547 aa  484  1e-135  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.601659  normal 
 
 
-
 
NC_011094  SeSA_A3335  methyl-accepting chemotaxis sensory transducer  47.7 
 
 
547 aa  482  1e-135  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.499063 
 
 
-
 
NC_011149  SeAg_B3326  methyl-accepting chemotaxis sensory transducer  47.52 
 
 
547 aa  481  1e-134  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0395  methyl-accepting chemotaxis sensory transducer  45.91 
 
 
556 aa  477  1e-133  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3873  methyl-accepting chemotaxis sensory transducer  44.94 
 
 
575 aa  408  1.0000000000000001e-112  Pectobacterium wasabiae WPP163  Bacteria  normal  0.460221  n/a   
 
 
-
 
NC_012917  PC1_3679  methyl-accepting chemotaxis sensory transducer  44.37 
 
 
567 aa  400  9.999999999999999e-111  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1849  methyl-accepting chemotaxis sensory transducer  45.25 
 
 
570 aa  387  1e-106  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  49.49 
 
 
552 aa  386  1e-106  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  61.56 
 
 
557 aa  384  1e-105  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  61.56 
 
 
557 aa  384  1e-105  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1535  methyl-accepting chemotaxis sensory transducer  43.71 
 
 
574 aa  384  1e-105  Dickeya zeae Ech1591  Bacteria  normal  0.241891  n/a   
 
 
-
 
NC_012917  PC1_1159  methyl-accepting chemotaxis sensory transducer  62.64 
 
 
556 aa  382  1e-105  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  61.56 
 
 
557 aa  382  1e-105  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_012912  Dd1591_3580  methyl-accepting chemotaxis sensory transducer  42.7 
 
 
572 aa  384  1e-105  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  53.11 
 
 
562 aa  385  1e-105  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_012880  Dd703_1507  methyl-accepting chemotaxis sensory transducer  43.84 
 
 
573 aa  379  1e-104  Dickeya dadantii Ech703  Bacteria  normal  0.273861  n/a   
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  43.22 
 
 
566 aa  379  1e-104  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_009708  YpsIP31758_1631  methyl-accepting chemotaxis protein  43.28 
 
 
579 aa  375  1e-102  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1742  methyl-accepting chemotaxis sensory transducer  43.28 
 
 
579 aa  375  1e-102  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1857  methyl-accepting chemotaxis sensory transducer  43.05 
 
 
561 aa  369  1e-101  Pectobacterium wasabiae WPP163  Bacteria  normal  0.769355  n/a   
 
 
-
 
NC_009436  Ent638_2457  methyl-accepting chemotaxis sensory transducer  44.13 
 
 
555 aa  369  1e-101  Enterobacter sp. 638  Bacteria  normal  0.890786  normal 
 
 
-
 
NC_012912  Dd1591_0523  methyl-accepting chemotaxis sensory transducer  43.73 
 
 
568 aa  369  1e-101  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2617  methyl-accepting chemotaxis sensory transducer  52.22 
 
 
573 aa  371  1e-101  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.38785  n/a   
 
 
-
 
NC_012880  Dd703_0562  methyl-accepting chemotaxis sensory transducer  48.08 
 
 
570 aa  370  1e-101  Dickeya dadantii Ech703  Bacteria  decreased coverage  0.00821394  n/a   
 
 
-
 
NC_009832  Spro_2983  methyl-accepting chemotaxis sensory transducer  52.93 
 
 
556 aa  370  1e-101  Serratia proteamaculans 568  Bacteria  normal  0.96835  normal 
 
 
-
 
NC_011149  SeAg_B3779  methyl-accepting chemotaxis protein  58.86 
 
 
547 aa  366  1e-100  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2609  methyl-accepting chemotaxis sensory transducer  53.29 
 
 
561 aa  366  1e-100  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A3769  methyl-accepting chemotaxis protein I  58.86 
 
 
547 aa  368  1e-100  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A3846  methyl-accepting chemotaxis protein I  58.86 
 
 
547 aa  367  1e-100  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_2982  methyl-accepting chemotaxis sensory transducer  61.98 
 
 
541 aa  367  1e-100  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C3889  methyl-accepting chemotaxis protein I  58.86 
 
 
547 aa  367  1e-100  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_01378  methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor  51.64 
 
 
546 aa  363  3e-99  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2225  methyl-accepting chemotaxis sensory transducer  51.64 
 
 
546 aa  363  3e-99  Escherichia coli DH1  Bacteria  normal  0.213228  n/a   
 
 
-
 
NC_012892  B21_01390  hypothetical protein  51.64 
 
 
546 aa  363  3e-99  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_1753  methyl-accepting chemotaxis protein III  51.64 
 
 
546 aa  363  3e-99  Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  2.79367e-17 
 
 
-
 
NC_009801  EcE24377A_1600  methyl-accepting chemotaxis protein III  51.64 
 
 
546 aa  363  4e-99  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_2238  methyl-accepting chemotaxis sensory transducer  51.39 
 
 
546 aa  363  5.0000000000000005e-99  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A3949  methyl-accepting chemotaxis protein I  58.57 
 
 
547 aa  363  5.0000000000000005e-99  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.748503  normal 
 
 
-
 
NC_009800  EcHS_A1503  methyl-accepting chemotaxis protein III  51.39 
 
 
546 aa  363  5.0000000000000005e-99  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_2026  methyl-accepting chemotaxis protein III  59.32 
 
 
470 aa  363  6e-99  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  hitchhiker  0.000000214401 
 
 
-
 
NC_011080  SNSL254_A4887  methyl-accepting chemotaxis protein I  55.67 
 
 
553 aa  359  7e-98  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  53.16 
 
 
661 aa  359  7e-98  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C4939  methyl-accepting chemotaxis protein I  55.67 
 
 
553 aa  359  7e-98  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.188217  normal 
 
 
-
 
NC_011094  SeSA_A4786  methyl-accepting chemotaxis protein I  46.6 
 
 
553 aa  359  9e-98  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.709187  normal 
 
 
-
 
NC_009801  EcE24377A_4947  methyl-accepting chemotaxis protein I  43.5 
 
 
554 aa  358  9.999999999999999e-98  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_5868  methyl-accepting chemotaxis protein I  43.6 
 
 
554 aa  357  1.9999999999999998e-97  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_3700  methyl-accepting chemotaxis sensory transducer  43.5 
 
 
554 aa  358  1.9999999999999998e-97  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.125609 
 
 
-
 
NC_010498  EcSMS35_4900  methyl-accepting chemotaxis protein I  43.77 
 
 
554 aa  357  2.9999999999999997e-97  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.979291 
 
 
-
 
CP001637  EcDH1_3642  methyl-accepting chemotaxis sensory transducer  43.4 
 
 
551 aa  357  3.9999999999999996e-97  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A4946  methyl-accepting chemotaxis protein I  46.4 
 
 
553 aa  356  5e-97  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.556415 
 
 
-
 
CP001509  ECD_04232  methyl-accepting chemotaxis protein I, serine sensor receptor  43.5 
 
 
551 aa  356  6.999999999999999e-97  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_04198  hypothetical protein  43.5 
 
 
551 aa  356  6.999999999999999e-97  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_1298  methyl-accepting chemotaxis protein II  45.04 
 
 
553 aa  355  2e-96  Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  0.00038087 
 
 
-
 
NC_009436  Ent638_0380  methyl-accepting chemotaxis sensory transducer  59.88 
 
 
549 aa  354  2.9999999999999997e-96  Enterobacter sp. 638  Bacteria  normal  0.214895  normal 
 
 
-
 
NC_009800  EcHS_A4586  methyl-accepting chemotaxis protein I  43.2 
 
 
557 aa  353  5.9999999999999994e-96  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C2134  methyl-accepting chemotaxis protein II  44.27 
 
 
553 aa  352  7e-96  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  1.16019e-17 
 
 
-
 
NC_010658  SbBS512_E4893  methyl-accepting chemotaxis protein I  43.33 
 
 
551 aa  352  7e-96  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1816  methyl-accepting chemotaxis sensory transducer  51.51 
 
 
651 aa  352  7e-96  Dickeya dadantii Ech703  Bacteria  normal  0.700193  n/a   
 
 
-
 
NC_011080  SNSL254_A2079  methyl-accepting chemotaxis protein II  59.48 
 
 
553 aa  352  1e-95  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.429347  hitchhiker  1.96177e-16 
 
 
-
 
NC_009708  YpsIP31758_1643  methyl-accepting chemotaxis protein  58.45 
 
 
536 aa  352  1e-95  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B1203  methyl-accepting chemotaxis protein II  44.27 
 
 
553 aa  352  1e-95  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.697919  n/a   
 
 
-
 
NC_010159  YpAngola_A3517  methyl-accepting chemotaxis protein  58.45 
 
 
536 aa  352  1e-95  Yersinia pestis Angola  Bacteria  normal  normal  0.549342 
 
 
-
 
NC_009436  Ent638_0513  methyl-accepting chemotaxis sensory transducer  43.15 
 
 
586 aa  352  1e-95  Enterobacter sp. 638  Bacteria  normal  hitchhiker  0.00498581 
 
 
-
 
NC_011205  SeD_A1326  methyl-accepting chemotaxis protein II  44.27 
 
 
553 aa  352  2e-95  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.452066  hitchhiker  2.3261e-17 
 
 
-
 
NC_011094  SeSA_A2074  methyl-accepting chemotaxis protein II  60.17 
 
 
553 aa  351  2e-95  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.162752  hitchhiker  0.000345874 
 
 
-
 
NC_012912  Dd1591_1804  methyl-accepting chemotaxis sensory transducer  53.39 
 
 
562 aa  350  3e-95  Dickeya zeae Ech1591  Bacteria  normal  0.0522685  n/a   
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  39.86 
 
 
567 aa  350  5e-95  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3172  methyl-accepting chemotaxis sensory transducer  60.81 
 
 
556 aa  349  8e-95  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2456  methyl-accepting protein IV  52.04 
 
 
533 aa  349  9e-95  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_1961  methyl-accepting chemotaxis sensory transducer  50.22 
 
 
563 aa  348  1e-94  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_2624  methyl-accepting chemotaxis protein II  60.06 
 
 
553 aa  348  1e-94  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.784316  hitchhiker  0.00000000183949 
 
 
-
 
CP001509  ECD_01857  methyl-accepting chemotaxis protein II  60.06 
 
 
553 aa  348  2e-94  Escherichia coli BL21(DE3)  Bacteria  normal  0.13191  n/a   
 
 
-
 
CP001637  EcDH1_1754  methyl-accepting chemotaxis sensory transducer  60.06 
 
 
553 aa  348  2e-94  Escherichia coli DH1  Bacteria  normal  0.0705276  n/a   
 
 
-
 
NC_010468  EcolC_1746  methyl-accepting chemotaxis sensory transducer  60.06 
 
 
553 aa  348  2e-94  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A1982  methyl-accepting chemotaxis protein II  60.06 
 
 
553 aa  348  2e-94  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_01846  hypothetical protein  60.06 
 
 
553 aa  348  2e-94  Escherichia coli BL21  Bacteria  normal  0.186429  n/a   
 
 
-
 
NC_009801  EcE24377A_2119  methyl-accepting chemotaxis protein II  59.42 
 
 
553 aa  347  3e-94  Escherichia coli E24377A  Bacteria  normal  0.0158521  n/a   
 
 
-
 
NC_011094  SeSA_A1744  methyl-accepting chemotaxis protein III  43.07 
 
 
535 aa  345  8.999999999999999e-94  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.693576  normal  0.460124 
 
 
-
 
NC_011080  SNSL254_A1740  methyl-accepting chemotaxis protein III  42.8 
 
 
541 aa  345  1e-93  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A1716  methyl-accepting chemotaxis protein III  43.07 
 
 
541 aa  345  1e-93  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.0288519 
 
 
-
 
NC_011353  ECH74115_2623  methyl-accepting protein IV  47.41 
 
 
533 aa  345  1e-93  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  hitchhiker  0.0000000448067 
 
 
-
 
NC_011149  SeAg_B1531  methyl-accepting chemotaxis protein III  42.8 
 
 
541 aa  345  1e-93  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
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