More than 300 homologs were found in PanDaTox collection
for query gene EcolC_2238 on replicon NC_010468
Organism: Escherichia coli ATCC 8739



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
CP001509  ECD_01378  methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor  99.27 
 
 
546 aa  1100    Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2225  methyl-accepting chemotaxis sensory transducer  99.27 
 
 
546 aa  1100    Escherichia coli DH1  Bacteria  normal  0.213228  n/a   
 
 
-
 
NC_011094  SeSA_A1744  methyl-accepting chemotaxis protein III  79.23 
 
 
535 aa  796    Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.693576  normal  0.460124 
 
 
-
 
NC_011149  SeAg_B1531  methyl-accepting chemotaxis protein III  79.23 
 
 
541 aa  797    Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_2238  methyl-accepting chemotaxis sensory transducer  100 
 
 
546 aa  1106    Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C1804  methyl-accepting chemotaxis protein III  79.04 
 
 
535 aa  796    Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_1753  methyl-accepting chemotaxis protein III  98.72 
 
 
546 aa  1091    Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  2.79367e-17 
 
 
-
 
NC_011205  SeD_A1716  methyl-accepting chemotaxis protein III  79.04 
 
 
541 aa  795    Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.0288519 
 
 
-
 
NC_012892  B21_01390  hypothetical protein  99.27 
 
 
546 aa  1100    Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A1740  methyl-accepting chemotaxis protein III  79.23 
 
 
541 aa  797    Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_1600  methyl-accepting chemotaxis protein III  99.08 
 
 
546 aa  1097    Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A1503  methyl-accepting chemotaxis protein III  99.82 
 
 
546 aa  1104    Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_2026  methyl-accepting chemotaxis protein III  97.87 
 
 
470 aa  916    Escherichia coli O157:H7 str. EC4115  Bacteria  normal  hitchhiker  0.000000214401 
 
 
-
 
NC_009436  Ent638_1961  methyl-accepting chemotaxis sensory transducer  78.11 
 
 
563 aa  771    Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_3580  methyl-accepting chemotaxis sensory transducer  59.03 
 
 
572 aa  582  1.0000000000000001e-165  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1535  methyl-accepting chemotaxis sensory transducer  60.08 
 
 
574 aa  583  1.0000000000000001e-165  Dickeya zeae Ech1591  Bacteria  normal  0.241891  n/a   
 
 
-
 
NC_012880  Dd703_1507  methyl-accepting chemotaxis sensory transducer  59.89 
 
 
573 aa  567  1e-160  Dickeya dadantii Ech703  Bacteria  normal  0.273861  n/a   
 
 
-
 
NC_010465  YPK_1742  methyl-accepting chemotaxis sensory transducer  58.7 
 
 
579 aa  565  1e-160  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1631  methyl-accepting chemotaxis protein  58.51 
 
 
579 aa  563  1.0000000000000001e-159  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1849  methyl-accepting chemotaxis sensory transducer  59.7 
 
 
570 aa  555  1e-156  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3458  methyl-accepting chemotaxis sensory transducer  58.86 
 
 
576 aa  552  1e-156  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2617  methyl-accepting chemotaxis sensory transducer  60.26 
 
 
573 aa  545  1e-154  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.38785  n/a   
 
 
-
 
NC_013421  Pecwa_3873  methyl-accepting chemotaxis sensory transducer  54.73 
 
 
575 aa  528  1e-149  Pectobacterium wasabiae WPP163  Bacteria  normal  0.460221  n/a   
 
 
-
 
NC_012917  PC1_3679  methyl-accepting chemotaxis sensory transducer  55.1 
 
 
567 aa  531  1e-149  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0523  methyl-accepting chemotaxis sensory transducer  55.73 
 
 
568 aa  473  1e-132  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0562  methyl-accepting chemotaxis sensory transducer  53.52 
 
 
570 aa  466  9.999999999999999e-131  Dickeya dadantii Ech703  Bacteria  decreased coverage  0.00821394  n/a   
 
 
-
 
NC_013421  Pecwa_3802  methyl-accepting chemotaxis sensory transducer  49.9 
 
 
539 aa  453  1.0000000000000001e-126  Pectobacterium wasabiae WPP163  Bacteria  normal  0.740438  n/a   
 
 
-
 
NC_012917  PC1_3614  methyl-accepting chemotaxis sensory transducer  49.81 
 
 
539 aa  441  9.999999999999999e-123  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.363004  n/a   
 
 
-
 
NC_012917  PC1_1208  methyl-accepting chemotaxis sensory transducer  53 
 
 
555 aa  385  1e-105  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000392698  n/a   
 
 
-
 
NC_013421  Pecwa_3123  methyl-accepting chemotaxis sensory transducer  53 
 
 
555 aa  381  1e-104  Pectobacterium wasabiae WPP163  Bacteria  decreased coverage  0.000142041  n/a   
 
 
-
 
NC_009436  Ent638_2457  methyl-accepting chemotaxis sensory transducer  45.97 
 
 
555 aa  380  1e-104  Enterobacter sp. 638  Bacteria  normal  0.890786  normal 
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  49.89 
 
 
557 aa  369  1e-101  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  49.89 
 
 
557 aa  369  1e-101  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C2134  methyl-accepting chemotaxis protein II  45.08 
 
 
553 aa  371  1e-101  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  1.16019e-17 
 
 
-
 
NC_011205  SeD_A1326  methyl-accepting chemotaxis protein II  45.08 
 
 
553 aa  370  1e-101  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.452066  hitchhiker  2.3261e-17 
 
 
-
 
NC_011149  SeAg_B1203  methyl-accepting chemotaxis protein II  45.08 
 
 
553 aa  370  1e-101  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.697919  n/a   
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  49.66 
 
 
557 aa  369  1e-101  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_012912  Dd1591_1804  methyl-accepting chemotaxis sensory transducer  50.93 
 
 
562 aa  366  1e-100  Dickeya zeae Ech1591  Bacteria  normal  0.0522685  n/a   
 
 
-
 
NC_011080  SNSL254_A2079  methyl-accepting chemotaxis protein II  44.9 
 
 
553 aa  367  1e-100  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.429347  hitchhiker  1.96177e-16 
 
 
-
 
NC_011094  SeSA_A3769  methyl-accepting chemotaxis protein I  48.91 
 
 
547 aa  369  1e-100  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A2074  methyl-accepting chemotaxis protein II  44.9 
 
 
553 aa  368  1e-100  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.162752  hitchhiker  0.000345874 
 
 
-
 
NC_011083  SeHA_C3889  methyl-accepting chemotaxis protein I  48.7 
 
 
547 aa  365  1e-100  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3779  methyl-accepting chemotaxis protein  48.7 
 
 
547 aa  367  1e-100  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  55.5 
 
 
661 aa  367  1e-100  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A3846  methyl-accepting chemotaxis protein I  48.48 
 
 
547 aa  364  2e-99  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A3949  methyl-accepting chemotaxis protein I  48.48 
 
 
547 aa  363  4e-99  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.748503  normal 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  42.56 
 
 
566 aa  362  1e-98  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_010498  EcSMS35_1298  methyl-accepting chemotaxis protein II  42.93 
 
 
553 aa  361  2e-98  Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  0.00038087 
 
 
-
 
NC_012880  Dd703_1119  methyl-accepting chemotaxis sensory transducer  65.84 
 
 
561 aa  360  3e-98  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1816  methyl-accepting chemotaxis sensory transducer  49.89 
 
 
651 aa  360  4e-98  Dickeya dadantii Ech703  Bacteria  normal  0.700193  n/a   
 
 
-
 
NC_012917  PC1_4161  methyl-accepting chemotaxis sensory transducer  64.47 
 
 
628 aa  359  6e-98  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_4443  methyl-accepting chemotaxis sensory transducer  62.54 
 
 
630 aa  358  9.999999999999999e-98  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  46.58 
 
 
552 aa  358  1.9999999999999998e-97  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  43.01 
 
 
562 aa  357  5e-97  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_012880  Dd703_2509  methyl-accepting chemotaxis sensory transducer  58.16 
 
 
557 aa  356  5.999999999999999e-97  Dickeya dadantii Ech703  Bacteria  normal  0.377261  n/a   
 
 
-
 
NC_013421  Pecwa_1857  methyl-accepting chemotaxis sensory transducer  44.01 
 
 
561 aa  355  7.999999999999999e-97  Pectobacterium wasabiae WPP163  Bacteria  normal  0.769355  n/a   
 
 
-
 
NC_012912  Dd1591_2406  methyl-accepting chemotaxis sensory transducer  41 
 
 
559 aa  353  2.9999999999999997e-96  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_0380  methyl-accepting chemotaxis sensory transducer  48.1 
 
 
549 aa  353  2.9999999999999997e-96  Enterobacter sp. 638  Bacteria  normal  0.214895  normal 
 
 
-
 
NC_009708  YpsIP31758_4122  methyl-accepting chemotaxis protein  61.68 
 
 
649 aa  353  5.9999999999999994e-96  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_0034  methyl-accepting chemotaxis sensory transducer  61.68 
 
 
649 aa  353  5.9999999999999994e-96  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.38678  n/a   
 
 
-
 
NC_009832  Spro_2983  methyl-accepting chemotaxis sensory transducer  50.11 
 
 
556 aa  352  7e-96  Serratia proteamaculans 568  Bacteria  normal  0.96835  normal 
 
 
-
 
NC_011353  ECH74115_2624  methyl-accepting chemotaxis protein II  43.17 
 
 
553 aa  352  8e-96  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.784316  hitchhiker  0.00000000183949 
 
 
-
 
NC_012912  Dd1591_2937  methyl-accepting chemotaxis sensory transducer  55.11 
 
 
564 aa  352  8e-96  Dickeya zeae Ech1591  Bacteria  normal  0.0948744  n/a   
 
 
-
 
NC_009801  EcE24377A_2119  methyl-accepting chemotaxis protein II  42.99 
 
 
553 aa  352  1e-95  Escherichia coli E24377A  Bacteria  normal  0.0158521  n/a   
 
 
-
 
CP001509  ECD_01857  methyl-accepting chemotaxis protein II  42.99 
 
 
553 aa  351  2e-95  Escherichia coli BL21(DE3)  Bacteria  normal  0.13191  n/a   
 
 
-
 
CP001637  EcDH1_1754  methyl-accepting chemotaxis sensory transducer  42.99 
 
 
553 aa  351  2e-95  Escherichia coli DH1  Bacteria  normal  0.0705276  n/a   
 
 
-
 
NC_010468  EcolC_1746  methyl-accepting chemotaxis sensory transducer  42.99 
 
 
553 aa  351  2e-95  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A1982  methyl-accepting chemotaxis protein II  42.99 
 
 
553 aa  351  2e-95  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_01846  hypothetical protein  42.99 
 
 
553 aa  351  2e-95  Escherichia coli BL21  Bacteria  normal  0.186429  n/a   
 
 
-
 
NC_012880  Dd703_1806  methyl-accepting chemotaxis sensory transducer  55.77 
 
 
652 aa  350  4e-95  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_3407  methyl-accepting chemotaxis sensory transducer  43.75 
 
 
545 aa  349  7e-95  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3326  methyl-accepting chemotaxis sensory transducer  50.48 
 
 
547 aa  349  8e-95  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A3501  methyl-accepting chemotaxis sensory transducer  50.48 
 
 
547 aa  349  8e-95  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.601659  normal 
 
 
-
 
NC_011080  SNSL254_A3406  methyl-accepting chemotaxis sensory transducer  50.48 
 
 
547 aa  349  9e-95  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C3400  methyl-accepting chemotaxis sensory transducer  50.48 
 
 
547 aa  348  1e-94  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.779493 
 
 
-
 
NC_012917  PC1_2609  methyl-accepting chemotaxis sensory transducer  43.84 
 
 
561 aa  347  2e-94  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  45.71 
 
 
567 aa  348  2e-94  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A3335  methyl-accepting chemotaxis sensory transducer  50.24 
 
 
547 aa  347  3e-94  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.499063 
 
 
-
 
NC_009832  Spro_2982  methyl-accepting chemotaxis sensory transducer  52.97 
 
 
541 aa  345  1e-93  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_1940  methyl-accepting chemotaxis sensory transducer  50.51 
 
 
560 aa  344  2e-93  Pectobacterium wasabiae WPP163  Bacteria  normal  0.364705  n/a   
 
 
-
 
NC_011080  SNSL254_A4887  methyl-accepting chemotaxis protein I  47.84 
 
 
553 aa  343  4e-93  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C4939  methyl-accepting chemotaxis protein I  47.84 
 
 
553 aa  343  4e-93  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.188217  normal 
 
 
-
 
NC_010159  YpAngola_A3517  methyl-accepting chemotaxis protein  50.12 
 
 
536 aa  343  5e-93  Yersinia pestis Angola  Bacteria  normal  normal  0.549342 
 
 
-
 
NC_010159  YpAngola_A3774  methyl-accepting chemotaxis protein  62.21 
 
 
649 aa  343  5e-93  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_1643  methyl-accepting chemotaxis protein  50.12 
 
 
536 aa  343  5e-93  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1669  methyl-accepting chemotaxis sensory transducer  58.6 
 
 
560 aa  342  8e-93  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1159  methyl-accepting chemotaxis sensory transducer  43.75 
 
 
556 aa  342  1e-92  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2081  methyl-accepting chemotaxis sensory transducer  56.47 
 
 
668 aa  341  2e-92  Dickeya dadantii Ech703  Bacteria  normal  0.622232  n/a   
 
 
-
 
NC_012880  Dd703_2108  methyl-accepting chemotaxis sensory transducer  59.42 
 
 
556 aa  340  2.9999999999999998e-92  Dickeya dadantii Ech703  Bacteria  normal  0.0190315  n/a   
 
 
-
 
NC_009832  Spro_0080  methyl-accepting chemotaxis sensory transducer  49.76 
 
 
642 aa  340  4e-92  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A4786  methyl-accepting chemotaxis protein I  47.61 
 
 
553 aa  340  5.9999999999999996e-92  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.709187  normal 
 
 
-
 
NC_011205  SeD_A4946  methyl-accepting chemotaxis protein I  47.61 
 
 
553 aa  338  9.999999999999999e-92  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.556415 
 
 
-
 
NC_012912  Dd1591_0395  methyl-accepting chemotaxis sensory transducer  42.5 
 
 
556 aa  338  9.999999999999999e-92  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1838  methyl-accepting chemotaxis sensory transducer  56.51 
 
 
667 aa  338  9.999999999999999e-92  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2408  methyl-accepting chemotaxis sensory transducer  40.67 
 
 
557 aa  337  2.9999999999999997e-91  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2308  methyl-accepting chemotaxis sensory transducer  49.61 
 
 
560 aa  337  3.9999999999999995e-91  Dickeya dadantii Ech703  Bacteria  normal  0.52721  n/a   
 
 
-
 
NC_012912  Dd1591_0769  methyl-accepting chemotaxis sensory transducer  58.41 
 
 
505 aa  337  3.9999999999999995e-91  Dickeya zeae Ech1591  Bacteria  normal  0.0409416  n/a   
 
 
-
 
NC_010658  SbBS512_E2179  methyl-accepting chemotaxis protein II  65.86 
 
 
472 aa  334  2e-90  Shigella boydii CDC 3083-94  Bacteria  normal  0.472287  n/a   
 
 
-
 
NC_012912  Dd1591_2407  methyl-accepting chemotaxis sensory transducer  41.43 
 
 
555 aa  335  2e-90  Dickeya zeae Ech1591  Bacteria  normal  0.880863  n/a   
 
 
-
 
NC_009436  Ent638_0513  methyl-accepting chemotaxis sensory transducer  43.49 
 
 
586 aa  334  2e-90  Enterobacter sp. 638  Bacteria  normal  hitchhiker  0.00498581 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>