Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2179 |
Symbol | cheM |
ID | 6271719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 1982640 |
End bp | 1984058 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641726204 |
Product | methyl-accepting chemotaxis protein II |
Protein accession | YP_001880693 |
Protein GI | 187732383 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.472287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAACC GTATCCGCGT AGTCACGCTG TTGGTAATGG TGTTGGGGGT ATTTGCACTG TTACAGCTTA TTTCCGGCAG TCTGTTTTTT TCTTCCCTTC ACCATAGCCA GAAGAGCTTT GTGGTTTCCA ATCAATTGCG GGAACAGCAG GGCGAGCTGA CGTCAACCTG GGATTTAATG CTGCAAACGC GCATTAACCT GAGTCGTTCA GCGGTGCGGA TGATGATGGA TTCCTCCAAT CAACAAAGTA ACGCCAAAGT TGAATTGCTC GATAGCGCCA GGAAAACATT GGCGCAGGCA GCGACGCATT ATAAAAAATT CAAAAGCATG GCACCGTTAC CTGAAATGGT CGCTACCAGT CGTAATATTG ATGAAAAATA TAAAAACTAT TACACAGCGT TAACTGAACT GATTGATTAT CTAGATTATG GCAATACTGG AGCTTATTTC GCTCAGCCAA CCCAGGGAAT GCAAAACATT GACGGGCGCA GTGAAATGGG CGACCTGGCG CAGAGCGTTT CACATATGCA ACGCTCTTTG ACTGACACCG TCACTCATGT CCGCGAAGGT TCAGATGCCA TCTATGCCGG TACCCGTGAA ATTGCGGCGG GCAACACCGA TCTTTCCTCC CGTACTGAAC AGCAGGCATC CGCGCTGGAA GAAACTGCCG CCAGCATGGA GCAGCTCACC GCGACAGTGA AGCAAAACGC CGATAACGCC CGCCAGGCCT CGCAACTGGC GCAAAGTGCC TCCGACACCG CCCAGCACGG CGGCAAAGTG GTGGATGGCG TAGTGAAAAC GATGCATGAG ATCGCCGATA GTTCGAAGAA AATTGCCGAC ATTATCAGCG TTATCGACGG TATCGCCTTC CAGACTAATA TCCTCGCGCT GAATGCCGCG GTTGAAGCCG CGCGTGCGGG TGAACAGGGC CGTGGTTTTG CCGTGGTGGC GGGTGAAGTG CGTAATCTTG CCAGTCGCAG CGTCCAGGCG GCAAAAGAGA TCAAAGCCCT CATTGAAGAC TCCGTCGCAC GCGTTGATAC CGGTTCGGTG CTGGTCGAAA GCGCCGGGGA AACAATGAAC AATATCGTCA ATGCTGTCAC TCGCGTGACT GACATTATGG GCGAGATTGC ATCGGCATCG GATGAACAGA GCCGTGGCAT CGTTCAAGTC GCATTGGCGG TTTCGGAAAT GGATCGCGTC ACGCAACAGA ACGCATCGCT GGTGCAGGAA TCAGCTGCCG CCGCCGCTGC GCTGGAAGAA CAGGCGAGTC GTTTAACGCA AGCGGTTTCC ACGTTCCGTC TGGCAGCCAG CCCACTCACC AATAAACCGC AAACACCATC CCGTCCTGCC AGTGAGCAAC CACCGGCACA GCCACGACTG CGAATTGCTG AACAAGATCC AAACTGGGAA ACATTTTGA
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Protein sequence | MINRIRVVTL LVMVLGVFAL LQLISGSLFF SSLHHSQKSF VVSNQLREQQ GELTSTWDLM LQTRINLSRS AVRMMMDSSN QQSNAKVELL DSARKTLAQA ATHYKKFKSM APLPEMVATS RNIDEKYKNY YTALTELIDY LDYGNTGAYF AQPTQGMQNI DGRSEMGDLA QSVSHMQRSL TDTVTHVREG SDAIYAGTRE IAAGNTDLSS RTEQQASALE ETAASMEQLT ATVKQNADNA RQASQLAQSA SDTAQHGGKV VDGVVKTMHE IADSSKKIAD IISVIDGIAF QTNILALNAA VEAARAGEQG RGFAVVAGEV RNLASRSVQA AKEIKALIED SVARVDTGSV LVESAGETMN NIVNAVTRVT DIMGEIASAS DEQSRGIVQV ALAVSEMDRV TQQNASLVQE SAAAAAALEE QASRLTQAVS TFRLAASPLT NKPQTPSRPA SEQPPAQPRL RIAEQDPNWE TF
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