| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2179 |
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| Symbol | cheM |
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| ID | 6271719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 1982640 |
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| End bp | 1984058 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641726204 |
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| Product | methyl-accepting chemotaxis protein II |
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| Protein accession | YP_001880693 |
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| Protein GI | 187732383 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.472287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAACC GTATCCGCGT AGTCACGCTG TTGGTAATGG TGTTGGGGGT ATTTGCACTG
TTACAGCTTA TTTCCGGCAG TCTGTTTTTT TCTTCCCTTC ACCATAGCCA GAAGAGCTTT
GTGGTTTCCA ATCAATTGCG GGAACAGCAG GGCGAGCTGA CGTCAACCTG GGATTTAATG
CTGCAAACGC GCATTAACCT GAGTCGTTCA GCGGTGCGGA TGATGATGGA TTCCTCCAAT
CAACAAAGTA ACGCCAAAGT TGAATTGCTC GATAGCGCCA GGAAAACATT GGCGCAGGCA
GCGACGCATT ATAAAAAATT CAAAAGCATG GCACCGTTAC CTGAAATGGT CGCTACCAGT
CGTAATATTG ATGAAAAATA TAAAAACTAT TACACAGCGT TAACTGAACT GATTGATTAT
CTAGATTATG GCAATACTGG AGCTTATTTC GCTCAGCCAA CCCAGGGAAT GCAAAACATT
GACGGGCGCA GTGAAATGGG CGACCTGGCG CAGAGCGTTT CACATATGCA ACGCTCTTTG
ACTGACACCG TCACTCATGT CCGCGAAGGT TCAGATGCCA TCTATGCCGG TACCCGTGAA
ATTGCGGCGG GCAACACCGA TCTTTCCTCC CGTACTGAAC AGCAGGCATC CGCGCTGGAA
GAAACTGCCG CCAGCATGGA GCAGCTCACC GCGACAGTGA AGCAAAACGC CGATAACGCC
CGCCAGGCCT CGCAACTGGC GCAAAGTGCC TCCGACACCG CCCAGCACGG CGGCAAAGTG
GTGGATGGCG TAGTGAAAAC GATGCATGAG ATCGCCGATA GTTCGAAGAA AATTGCCGAC
ATTATCAGCG TTATCGACGG TATCGCCTTC CAGACTAATA TCCTCGCGCT GAATGCCGCG
GTTGAAGCCG CGCGTGCGGG TGAACAGGGC CGTGGTTTTG CCGTGGTGGC GGGTGAAGTG
CGTAATCTTG CCAGTCGCAG CGTCCAGGCG GCAAAAGAGA TCAAAGCCCT CATTGAAGAC
TCCGTCGCAC GCGTTGATAC CGGTTCGGTG CTGGTCGAAA GCGCCGGGGA AACAATGAAC
AATATCGTCA ATGCTGTCAC TCGCGTGACT GACATTATGG GCGAGATTGC ATCGGCATCG
GATGAACAGA GCCGTGGCAT CGTTCAAGTC GCATTGGCGG TTTCGGAAAT GGATCGCGTC
ACGCAACAGA ACGCATCGCT GGTGCAGGAA TCAGCTGCCG CCGCCGCTGC GCTGGAAGAA
CAGGCGAGTC GTTTAACGCA AGCGGTTTCC ACGTTCCGTC TGGCAGCCAG CCCACTCACC
AATAAACCGC AAACACCATC CCGTCCTGCC AGTGAGCAAC CACCGGCACA GCCACGACTG
CGAATTGCTG AACAAGATCC AAACTGGGAA ACATTTTGA
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| Protein sequence | MINRIRVVTL LVMVLGVFAL LQLISGSLFF SSLHHSQKSF VVSNQLREQQ GELTSTWDLM
LQTRINLSRS AVRMMMDSSN QQSNAKVELL DSARKTLAQA ATHYKKFKSM APLPEMVATS
RNIDEKYKNY YTALTELIDY LDYGNTGAYF AQPTQGMQNI DGRSEMGDLA QSVSHMQRSL
TDTVTHVREG SDAIYAGTRE IAAGNTDLSS RTEQQASALE ETAASMEQLT ATVKQNADNA
RQASQLAQSA SDTAQHGGKV VDGVVKTMHE IADSSKKIAD IISVIDGIAF QTNILALNAA
VEAARAGEQG RGFAVVAGEV RNLASRSVQA AKEIKALIED SVARVDTGSV LVESAGETMN
NIVNAVTRVT DIMGEIASAS DEQSRGIVQV ALAVSEMDRV TQQNASLVQE SAAAAAALEE
QASRLTQAVS TFRLAASPLT NKPQTPSRPA SEQPPAQPRL RIAEQDPNWE TF
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