More than 300 homologs were found in PanDaTox collection
for query gene PC1_3614 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012917  PC1_3614  methyl-accepting chemotaxis sensory transducer  100 
 
 
539 aa  1090    Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.363004  n/a   
 
 
-
 
NC_013421  Pecwa_3802  methyl-accepting chemotaxis sensory transducer  91.84 
 
 
539 aa  989    Pectobacterium wasabiae WPP163  Bacteria  normal  0.740438  n/a   
 
 
-
 
NC_009708  YpsIP31758_1631  methyl-accepting chemotaxis protein  55.89 
 
 
579 aa  552  1e-156  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1742  methyl-accepting chemotaxis sensory transducer  56.08 
 
 
579 aa  554  1e-156  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1535  methyl-accepting chemotaxis sensory transducer  55.43 
 
 
574 aa  523  1e-147  Dickeya zeae Ech1591  Bacteria  normal  0.241891  n/a   
 
 
-
 
NC_012880  Dd703_1507  methyl-accepting chemotaxis sensory transducer  54.1 
 
 
573 aa  524  1e-147  Dickeya dadantii Ech703  Bacteria  normal  0.273861  n/a   
 
 
-
 
NC_011205  SeD_A1716  methyl-accepting chemotaxis protein III  53.24 
 
 
541 aa  482  1e-135  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.0288519 
 
 
-
 
NC_011094  SeSA_A1744  methyl-accepting chemotaxis protein III  53.05 
 
 
535 aa  480  1e-134  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.693576  normal  0.460124 
 
 
-
 
NC_011080  SNSL254_A1740  methyl-accepting chemotaxis protein III  53.05 
 
 
541 aa  480  1e-134  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C1804  methyl-accepting chemotaxis protein III  53.24 
 
 
535 aa  481  1e-134  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_3679  methyl-accepting chemotaxis sensory transducer  51.26 
 
 
567 aa  480  1e-134  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B1531  methyl-accepting chemotaxis protein III  53.05 
 
 
541 aa  480  1e-134  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1849  methyl-accepting chemotaxis sensory transducer  53.45 
 
 
570 aa  476  1e-133  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2617  methyl-accepting chemotaxis sensory transducer  54.6 
 
 
573 aa  476  1e-133  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.38785  n/a   
 
 
-
 
CP001509  ECD_01378  methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor  50 
 
 
546 aa  472  1e-132  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2225  methyl-accepting chemotaxis sensory transducer  50 
 
 
546 aa  472  1e-132  Escherichia coli DH1  Bacteria  normal  0.213228  n/a   
 
 
-
 
NC_009801  EcE24377A_1600  methyl-accepting chemotaxis protein III  50.19 
 
 
546 aa  474  1e-132  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_01390  hypothetical protein  50 
 
 
546 aa  472  1e-132  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_1753  methyl-accepting chemotaxis protein III  50 
 
 
546 aa  471  1.0000000000000001e-131  Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  2.79367e-17 
 
 
-
 
NC_010468  EcolC_2238  methyl-accepting chemotaxis sensory transducer  49.81 
 
 
546 aa  470  1.0000000000000001e-131  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A1503  methyl-accepting chemotaxis protein III  49.81 
 
 
546 aa  470  1.0000000000000001e-131  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0562  methyl-accepting chemotaxis sensory transducer  52.96 
 
 
570 aa  470  1.0000000000000001e-131  Dickeya dadantii Ech703  Bacteria  decreased coverage  0.00821394  n/a   
 
 
-
 
NC_013421  Pecwa_3873  methyl-accepting chemotaxis sensory transducer  51.06 
 
 
575 aa  469  1.0000000000000001e-131  Pectobacterium wasabiae WPP163  Bacteria  normal  0.460221  n/a   
 
 
-
 
NC_012912  Dd1591_3580  methyl-accepting chemotaxis sensory transducer  48.47 
 
 
572 aa  468  9.999999999999999e-131  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3458  methyl-accepting chemotaxis sensory transducer  50.77 
 
 
576 aa  461  9.999999999999999e-129  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1961  methyl-accepting chemotaxis sensory transducer  51.72 
 
 
563 aa  448  1e-125  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_0523  methyl-accepting chemotaxis sensory transducer  50.48 
 
 
568 aa  451  1e-125  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_2026  methyl-accepting chemotaxis protein III  53.5 
 
 
470 aa  411  1e-113  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  hitchhiker  0.000000214401 
 
 
-
 
NC_009436  Ent638_2457  methyl-accepting chemotaxis sensory transducer  43.02 
 
 
555 aa  344  2e-93  Enterobacter sp. 638  Bacteria  normal  0.890786  normal 
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  58.33 
 
 
661 aa  336  5.999999999999999e-91  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1857  methyl-accepting chemotaxis sensory transducer  46.65 
 
 
561 aa  336  7.999999999999999e-91  Pectobacterium wasabiae WPP163  Bacteria  normal  0.769355  n/a   
 
 
-
 
NC_009436  Ent638_0380  methyl-accepting chemotaxis sensory transducer  59.74 
 
 
549 aa  333  5e-90  Enterobacter sp. 638  Bacteria  normal  0.214895  normal 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  50.91 
 
 
566 aa  332  1e-89  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_012917  PC1_1208  methyl-accepting chemotaxis sensory transducer  48.09 
 
 
555 aa  332  1e-89  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000392698  n/a   
 
 
-
 
NC_012912  Dd1591_1804  methyl-accepting chemotaxis sensory transducer  43.33 
 
 
562 aa  329  7e-89  Dickeya zeae Ech1591  Bacteria  normal  0.0522685  n/a   
 
 
-
 
NC_011205  SeD_A3949  methyl-accepting chemotaxis protein I  46.22 
 
 
547 aa  329  9e-89  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.748503  normal 
 
 
-
 
NC_011083  SeHA_C2134  methyl-accepting chemotaxis protein II  59.61 
 
 
553 aa  328  1.0000000000000001e-88  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  1.16019e-17 
 
 
-
 
NC_011205  SeD_A1326  methyl-accepting chemotaxis protein II  59.61 
 
 
553 aa  328  1.0000000000000001e-88  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.452066  hitchhiker  2.3261e-17 
 
 
-
 
NC_011094  SeSA_A2074  methyl-accepting chemotaxis protein II  59.61 
 
 
553 aa  328  1.0000000000000001e-88  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.162752  hitchhiker  0.000345874 
 
 
-
 
NC_011149  SeAg_B1203  methyl-accepting chemotaxis protein II  59.61 
 
 
553 aa  328  2.0000000000000001e-88  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.697919  n/a   
 
 
-
 
NC_011149  SeAg_B3779  methyl-accepting chemotaxis protein  46 
 
 
547 aa  326  6e-88  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C3889  methyl-accepting chemotaxis protein I  46 
 
 
547 aa  325  1e-87  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A2079  methyl-accepting chemotaxis protein II  59.28 
 
 
553 aa  325  1e-87  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.429347  hitchhiker  1.96177e-16 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  50.54 
 
 
562 aa  324  2e-87  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_013421  Pecwa_3123  methyl-accepting chemotaxis sensory transducer  47.84 
 
 
555 aa  325  2e-87  Pectobacterium wasabiae WPP163  Bacteria  decreased coverage  0.000142041  n/a   
 
 
-
 
NC_012917  PC1_2609  methyl-accepting chemotaxis sensory transducer  49.03 
 
 
561 aa  324  3e-87  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A3769  methyl-accepting chemotaxis protein I  45.78 
 
 
547 aa  323  5e-87  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  57.57 
 
 
557 aa  323  6e-87  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_011080  SNSL254_A3846  methyl-accepting chemotaxis protein I  46 
 
 
547 aa  323  6e-87  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  57.24 
 
 
557 aa  321  3e-86  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2308  methyl-accepting chemotaxis sensory transducer  40.62 
 
 
560 aa  321  3e-86  Dickeya dadantii Ech703  Bacteria  normal  0.52721  n/a   
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  57.24 
 
 
557 aa  321  3e-86  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_1298  methyl-accepting chemotaxis protein II  42.45 
 
 
553 aa  321  3e-86  Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  0.00038087 
 
 
-
 
NC_009436  Ent638_0513  methyl-accepting chemotaxis sensory transducer  49.64 
 
 
586 aa  320  3.9999999999999996e-86  Enterobacter sp. 638  Bacteria  normal  hitchhiker  0.00498581 
 
 
-
 
NC_011094  SeSA_A4786  methyl-accepting chemotaxis protein I  56.48 
 
 
553 aa  318  2e-85  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.709187  normal 
 
 
-
 
NC_009832  Spro_2982  methyl-accepting chemotaxis sensory transducer  47.62 
 
 
541 aa  317  3e-85  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1806  methyl-accepting chemotaxis sensory transducer  57.1 
 
 
652 aa  317  3e-85  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1816  methyl-accepting chemotaxis sensory transducer  55.32 
 
 
651 aa  317  4e-85  Dickeya dadantii Ech703  Bacteria  normal  0.700193  n/a   
 
 
-
 
NC_009801  EcE24377A_2119  methyl-accepting chemotaxis protein II  58.55 
 
 
553 aa  317  4e-85  Escherichia coli E24377A  Bacteria  normal  0.0158521  n/a   
 
 
-
 
NC_013421  Pecwa_3571  methyl-accepting chemotaxis sensory transducer  42.23 
 
 
528 aa  317  5e-85  Pectobacterium wasabiae WPP163  Bacteria  normal  0.595797  n/a   
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  51.65 
 
 
552 aa  317  5e-85  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
CP001509  ECD_01857  methyl-accepting chemotaxis protein II  58.55 
 
 
553 aa  316  6e-85  Escherichia coli BL21(DE3)  Bacteria  normal  0.13191  n/a   
 
 
-
 
CP001637  EcDH1_1754  methyl-accepting chemotaxis sensory transducer  58.55 
 
 
553 aa  316  6e-85  Escherichia coli DH1  Bacteria  normal  0.0705276  n/a   
 
 
-
 
NC_010468  EcolC_1746  methyl-accepting chemotaxis sensory transducer  58.55 
 
 
553 aa  316  6e-85  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A4946  methyl-accepting chemotaxis protein I  56.17 
 
 
553 aa  316  6e-85  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.556415 
 
 
-
 
NC_009800  EcHS_A1982  methyl-accepting chemotaxis protein II  58.55 
 
 
553 aa  316  6e-85  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_01846  hypothetical protein  58.55 
 
 
553 aa  316  6e-85  Escherichia coli BL21  Bacteria  normal  0.186429  n/a   
 
 
-
 
NC_011083  SeHA_C4939  methyl-accepting chemotaxis protein I  56.17 
 
 
553 aa  316  7e-85  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.188217  normal 
 
 
-
 
NC_011080  SNSL254_A4887  methyl-accepting chemotaxis protein I  56.17 
 
 
553 aa  316  7e-85  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_2108  methyl-accepting chemotaxis sensory transducer  55.52 
 
 
556 aa  314  2.9999999999999996e-84  Dickeya dadantii Ech703  Bacteria  normal  0.0190315  n/a   
 
 
-
 
NC_011353  ECH74115_2624  methyl-accepting chemotaxis protein II  58.22 
 
 
553 aa  313  2.9999999999999996e-84  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.784316  hitchhiker  0.00000000183949 
 
 
-
 
NC_012912  Dd1591_2406  methyl-accepting chemotaxis sensory transducer  39.81 
 
 
559 aa  312  1e-83  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3360  methyl-accepting chemotaxis sensory transducer  41.72 
 
 
655 aa  311  1e-83  Burkholderia sp. 383  Bacteria  normal  0.139099  normal 
 
 
-
 
NC_009832  Spro_2983  methyl-accepting chemotaxis sensory transducer  43.25 
 
 
556 aa  311  1e-83  Serratia proteamaculans 568  Bacteria  normal  0.96835  normal 
 
 
-
 
NC_012880  Dd703_1119  methyl-accepting chemotaxis sensory transducer  41.68 
 
 
561 aa  312  1e-83  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0184  methyl-accepting chemotaxis sensory transducer  41.31 
 
 
648 aa  311  2e-83  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_2456  methyl-accepting protein IV  53.94 
 
 
533 aa  311  2e-83  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_0171  methyl-accepting chemotaxis sensory transducer  41.51 
 
 
648 aa  310  2.9999999999999997e-83  Burkholderia ambifaria AMMD  Bacteria  normal  0.451768  n/a   
 
 
-
 
NC_013421  Pecwa_2019  methyl-accepting chemotaxis sensory transducer  52.48 
 
 
644 aa  309  9e-83  Pectobacterium wasabiae WPP163  Bacteria  normal  0.858801  n/a   
 
 
-
 
NC_012912  Dd1591_1838  methyl-accepting chemotaxis sensory transducer  54.04 
 
 
667 aa  308  2.0000000000000002e-82  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1940  methyl-accepting chemotaxis sensory transducer  39.15 
 
 
560 aa  308  2.0000000000000002e-82  Pectobacterium wasabiae WPP163  Bacteria  normal  0.364705  n/a   
 
 
-
 
NC_012917  PC1_3412  methyl-accepting chemotaxis sensory transducer  41.58 
 
 
528 aa  307  3e-82  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0936318  n/a   
 
 
-
 
CP001509  ECD_04232  methyl-accepting chemotaxis protein I, serine sensor receptor  55.11 
 
 
551 aa  306  4.0000000000000004e-82  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5597  methyl-accepting chemotaxis sensory transducer  47.7 
 
 
570 aa  307  4.0000000000000004e-82  Ralstonia eutropha JMP134  Bacteria  normal  0.253624  n/a   
 
 
-
 
NC_012892  B21_04198  hypothetical protein  55.11 
 
 
551 aa  306  4.0000000000000004e-82  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_5868  methyl-accepting chemotaxis protein I  55.11 
 
 
554 aa  307  4.0000000000000004e-82  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_4900  methyl-accepting chemotaxis protein I  55.11 
 
 
554 aa  306  4.0000000000000004e-82  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.979291 
 
 
-
 
CP001637  EcDH1_3642  methyl-accepting chemotaxis sensory transducer  49.87 
 
 
551 aa  306  5.0000000000000004e-82  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A4586  methyl-accepting chemotaxis protein I  55.11 
 
 
557 aa  306  5.0000000000000004e-82  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_4947  methyl-accepting chemotaxis protein I  55.11 
 
 
554 aa  306  5.0000000000000004e-82  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3700  methyl-accepting chemotaxis sensory transducer  55.11 
 
 
554 aa  306  5.0000000000000004e-82  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.125609 
 
 
-
 
NC_009708  YpsIP31758_1643  methyl-accepting chemotaxis protein  45.41 
 
 
536 aa  306  6e-82  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3517  methyl-accepting chemotaxis protein  45.41 
 
 
536 aa  306  6e-82  Yersinia pestis Angola  Bacteria  normal  normal  0.549342 
 
 
-
 
NC_011205  SeD_A3501  methyl-accepting chemotaxis sensory transducer  45.48 
 
 
547 aa  306  8.000000000000001e-82  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.601659  normal 
 
 
-
 
NC_011083  SeHA_C3400  methyl-accepting chemotaxis sensory transducer  45.48 
 
 
547 aa  306  8.000000000000001e-82  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.779493 
 
 
-
 
NC_011080  SNSL254_A3406  methyl-accepting chemotaxis sensory transducer  45.48 
 
 
547 aa  306  8.000000000000001e-82  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3326  methyl-accepting chemotaxis sensory transducer  45.48 
 
 
547 aa  305  9.000000000000001e-82  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_0034  methyl-accepting chemotaxis sensory transducer  54.46 
 
 
649 aa  305  1.0000000000000001e-81  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.38678  n/a   
 
 
-
 
NC_009708  YpsIP31758_4122  methyl-accepting chemotaxis protein  54.46 
 
 
649 aa  305  1.0000000000000001e-81  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2509  methyl-accepting chemotaxis sensory transducer  44.53 
 
 
557 aa  305  1.0000000000000001e-81  Dickeya dadantii Ech703  Bacteria  normal  0.377261  n/a   
 
 
-
 
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