Gene SNSL254_A1740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1740 
Symbol 
ID6485132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1712232 
End bp1713857 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content54% 
IMG OID642737120 
Productmethyl-accepting chemotaxis protein III 
Protein accessionYP_002040872 
Protein GI194443481 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAACA CATTCTCGAT GCAAGCCTCG CATAAACTGG GCTTCCTGCA TCATATTCGG 
CTGGTTCCGC TGTTTTCCTC CATTCTCGGT GGCATCCTTC TTCTTTTTGC TTTGAGCGCC
GGGCTGGCAG GCTATTTTCT GTTACAGGCC GATCGCGATC AGCGTGATGT CACGGACGAG
ATTCAGGTAC GGATGGGATT ATCCAACAGC GCTAACCACT TACGTACCGC ACGTATCAAT
ATGATCCACG CTGGCGCGGC GAGCCGGATT GCTGAAATGG ATGAAATGAA AGCCAATATT
GCCGCTGCGG AAACGCGGAT CAAGCAGTCT CAGGACGGCT TTAACGCTTA TATGTCCAGA
GCGGTGAAAA CACCCGCCGA TGACGCGTTA GATAACGAGT TAAACGCCCG CTACACCGCC
TATATCAACG GCCTGCAACC GATGCTGAAA TTTGCCAAAA ATGGCATGTT CGAAGCGATC
ATTAATCATG AAAACGAGCA GGCAAAACAA CTGGATGCAG CATATAACCA TGTCCTGTTG
AAAGCGATTG AACTGCGCAC CGAGCGGGCA AGACTACTTA GCGAGCAGGC TTACCAACGT
ACCCGGCTCG GTATGATGTT TATGATTGGC GCATTTACGT TGGCGCTGGT ATTGACGTTA
ATGACCTTCA TGGTACTGCG TCGCACGGTG ATACAACCCT TGCAGCAGTC TGCGTCACGT
ATCGAACGCA TTGCGGCGGG CGATCTGACC ATGGCTGACG AGCCCACAGG ACGCAGTGAA
ATTGGTCGCC TGAGCCATCA TCTTCAGCAG ATGCAGCATG CGTTGCAACA AACGGTAGGG
GCGGTGCGTC AGGGGGCGGA GGAAATTTAT CGAGGCACCA GCGAAATTAC CGCTGGTAAT
ACGGATTTAT CTTCTCGTAC TGAACAGCAG GCTGCCGCCA TTGAACAGAC CGCGGCCAGT
ATGGAACAGT TGACGGCAAC CGTTAAGCAG AATGCGGATA ATGCGCATCA CGCCAGCAAA
CTGGCGGAAG ATGCTTCCGG TAAAGCCAGC CGCGGAGGCC AGATGGTTTC CGGGGTCGTA
CAAACGATGG GGAATATTTC CACCAGCTCG AAAAAAATCT CGGAAATTAC CGCCGTCATT
AACAGTATCG CTTTCCAGAC CAACATTCTG GCGCTGAACG CGGCGGTCGA GGCGGCACGC
GCCGGGGAAC AAGGACGCGG TTTTGCGGTG GTCGCCAGTG AGGTTCGTAC CCTCGCCAGT
CGCAGCGCGC AGGCGGCAAA AGAGATTGAA GGCTTGATCG GCGCATCGGT CAGCCTGATT
GAACAAGGAT CTGAAGAGGT TATCGCTGCG GGGAGCACCA TGAATGAGAT TGTGGATGCC
GTCAAACGCG TCACCGATAT TATGCTCGAC ATCGCGGCAG CCTCTGATGA GCAAAGTCGC
GGTATTGTTC AGGTCAGTCA GGCGATTTCT GAGATGGACA AGGTTACGCA ACAAAACGCG
TCGCTGGTCG AAGAGGCGTC CGCGGCGGCG GCTTCGCTTG AAGAACAGGC CGCCCGCTTG
ACGCAAGCCG TTGATGCGTT TCATTTACAG GATACTGGCG CGACGATGCG ATCATCCTTC
CTTTAG
 
Protein sequence
MGNTFSMQAS HKLGFLHHIR LVPLFSSILG GILLLFALSA GLAGYFLLQA DRDQRDVTDE 
IQVRMGLSNS ANHLRTARIN MIHAGAASRI AEMDEMKANI AAAETRIKQS QDGFNAYMSR
AVKTPADDAL DNELNARYTA YINGLQPMLK FAKNGMFEAI INHENEQAKQ LDAAYNHVLL
KAIELRTERA RLLSEQAYQR TRLGMMFMIG AFTLALVLTL MTFMVLRRTV IQPLQQSASR
IERIAAGDLT MADEPTGRSE IGRLSHHLQQ MQHALQQTVG AVRQGAEEIY RGTSEITAGN
TDLSSRTEQQ AAAIEQTAAS MEQLTATVKQ NADNAHHASK LAEDASGKAS RGGQMVSGVV
QTMGNISTSS KKISEITAVI NSIAFQTNIL ALNAAVEAAR AGEQGRGFAV VASEVRTLAS
RSAQAAKEIE GLIGASVSLI EQGSEEVIAA GSTMNEIVDA VKRVTDIMLD IAAASDEQSR
GIVQVSQAIS EMDKVTQQNA SLVEEASAAA ASLEEQAARL TQAVDAFHLQ DTGATMRSSF
L