| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1298 |
|---|
| Symbol | tar |
|---|
| ID | 6146189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1286049 |
|---|
| End bp | 1287710 |
|---|
| Gene Length | 1662 bp |
|---|
| Protein Length | 553 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641616176 |
|---|
| Product | methyl-accepting chemotaxis protein II |
|---|
| Protein accession | YP_001743356 |
|---|
| Protein GI | 170680418 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.00038087 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATTAACC GTATCCGCGT AGTCACGCTG TTGGTAATGG TGCTGGGGGT ATTTGCACTG
TTACAGCTTA TTTCCGGCAG TCTGTTTTTT TCTTCCCTTC ACCATAGCCA GAAGAGCTTT
GTGGTTTCCA ATCAATTACG GGAACAGCAG GGCGAGCTGA CGTCAACCTG GGATTTAATG
CTGCAAACGC GCATTAACCT GAGTCGTTCA GCGGTGCGGA TGATGATGGA TTCATCCAAT
CAGCAAAGTA ATGCCAAAGT TGAATTGCTC GATAGCGCCA GGAAAACATT GGCCCAGGCC
GCGACGCATT ATAAAAAATT CAAAAGCATG GCACCGTTAC CTGAAATGGT CGCTACCAGT
CGTAATATTG ATGAAAAATA TAAAAACTAT CACACAGCGT TAACTGAACT GATTGATTAT
CTTGATTATG GCAATACTGG AGCTTATTTC GCTCAGCCAA CCCAGGGAAT GCAAAATGCA
ATGGGCGAAG CGTTTGCTCA GTACGCCCTC AGCAGTGAAA AACTGTATCG CGATATCGTC
ACTGACAACG CAGATGATTA CCGATTTGCC CAGTGGCAAC TGGCGGTTAT CGCGCTGGTG
GTGATATTGA TTCTGCTGGT GGCGTGGTAC GGCATTCGCC GTATGTTGCT TACACCGCTG
GCAAAAATTA TTGCTCACAT TCGCGAAATC GCCGGTGGTA ACCTGGCGAA TACCCTGACC
ATTGACGGGC GCAGTGAAAT GGGCGACCTG GCGCAGAGCG TTTCACATAT GCAACGCTCT
TTGACTGACA CCGTCACTCA TGTGCGTGAA GGTTCAGATG CCATCTATGC CGGTACCCGT
GAAATTGCGG CGGGCAACAC CGATCTTTCC TCCCGTACGG AACAGCAGGC ATCCGCGCTG
GAAGAAACTG CCGCCAGCAT GGAGCAGCTC ACCGCGACAG TGAAGCAAAA CGCCGATAAC
GCCCGCCAGG CCTCGCAACT GGCGCAAAGT GCCTCCGACA CCGCCCAGCA CGGCGGCAAA
GTGGTGGATG GCGTAGTGAA AACGATGCAT GAGATCGCCG ATAGTTCGAA GAAAATTGCC
GACATTATCA GCGTTATCGA CGGTATTGCC TTCCAGACTA ATATACTCGC GCTGAATGCC
GCTGTTGAAG CCGCGCGAGC GGGTGAACAG GGCCGTGGTT TTGCCGTGGT GGCGGGCGAA
GTGCGTAATC TTGCCAGTCG CAGCGCCCAG GCGGCAAAAG AGATCAAAGC CCTCATTGAA
GACTCCGTCT CGCGCGTTGA TACCGGTTCG GTGCTGGTCG AAAGCGCCGG GGAAACAATG
AACAATATCG TCAATGCTGT CACTCGCGTG ACTGACATTA TGGGCGAGAT TGCATCGGCA
TCGGATGAAC AGAGCCGTGG CATCGATCAA GTCGCATTGG CGGTTTCGGA AATGGATCGC
GTCACGCAAC AGAACGCATC GCTGGTGCAG GAATCAGCTG CCGCCGCAGC TGCGCTGGAA
GAACAGGCGA GTCGTTTAAC GCAAGCGGTT TCCGCGTTCC GTCTGGCAGC CAGCCCACTC
ACCAATAAAC CGCAAACACC ATCCCGTCCT GCCAGTGAGC AACCACCGGC ACAGCCACGA
CTGCGAATTA CTGAACAAGA TCCAAACTGG GAAACATTTT GA
|
|---|
| Protein sequence | MINRIRVVTL LVMVLGVFAL LQLISGSLFF SSLHHSQKSF VVSNQLREQQ GELTSTWDLM
LQTRINLSRS AVRMMMDSSN QQSNAKVELL DSARKTLAQA ATHYKKFKSM APLPEMVATS
RNIDEKYKNY HTALTELIDY LDYGNTGAYF AQPTQGMQNA MGEAFAQYAL SSEKLYRDIV
TDNADDYRFA QWQLAVIALV VILILLVAWY GIRRMLLTPL AKIIAHIREI AGGNLANTLT
IDGRSEMGDL AQSVSHMQRS LTDTVTHVRE GSDAIYAGTR EIAAGNTDLS SRTEQQASAL
EETAASMEQL TATVKQNADN ARQASQLAQS ASDTAQHGGK VVDGVVKTMH EIADSSKKIA
DIISVIDGIA FQTNILALNA AVEAARAGEQ GRGFAVVAGE VRNLASRSAQ AAKEIKALIE
DSVSRVDTGS VLVESAGETM NNIVNAVTRV TDIMGEIASA SDEQSRGIDQ VALAVSEMDR
VTQQNASLVQ ESAAAAAALE EQASRLTQAV SAFRLAASPL TNKPQTPSRP ASEQPPAQPR
LRITEQDPNW ETF
|
|---|
| |