Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1159 |
Symbol | |
ID | 8132088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1357697 |
End bp | 1359367 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644864441 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_003016743 |
Protein GI | 253687553 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAC GCATAAAAGT CATTACCATC CTTGTTATCT TATTGTGTGT CTTGGGGATA TCTCAATTTT TAACCGGTGC GCTATCCGTT CGGGCACTGA TTAATGACCG AGAGGGATTC CTTGTTTCCC AACGCTCTAA CCAGAATGTG GCCGCCTTTA CCGATGCATG GATTATGATG AATCAGACGC GCATCGCTAT CGGTTCTATT ATACAGAACA TGATGATGGG GAATGCGGAT AAAGAGGCCA TGCAGGCGCT CTTACAGCAG GCAAAAACGC AATTGGCTGC CTCCGAGAGT AGTTATAAAC ACTATTTATC TTTGCCTAAT ACACCCGGAT TGGATGACGC GTTATCCAAA AAACTTGAGG CGAGCTATAC CGCTTACGAC AAGCTGCTGA ATGATATTGT TGATTCGCTT TCCGGCGGGT TGGCGGGGGC GGCGATGAAG TTGAGTAGTG GGGCTACGCC GCTTAACGTG GCCATGCAGG ACGCCTACAT TACGTGGCGT GCGGCGCAAA ACCAGCTGTC GGATGACGGC CTCAAGGAAA ACCACGCGGC GTTTGAAACG ATGCTGTGGT TGCTGGGCGC ACTGTCCGTC GTCGTCGTGC TGGTGATTAT CCTCAGTTGG ATCGGGTTGC AGCGTATTCT TTTGCACCCG CTGCGTACGC TCATGCAGCA TATCAGCGCT ATCGCCGAGG GTAATCTGAC GCATCCGATT GATACCACAG GCCGCAATGA GATGAGCCAG CTCGCGGCAG GGCTGCACCA TATGCAGCAG TCATTAATCC GCACCGTGAG TCTGGTGCGC GACAGCTCCC ACTCCATCCA CTCTGGGGCG AGTGAAATCT CGGTCGGCAG CAACGATCTG TCTTCGCGTA CGGAGCAACA GGCCGCCTCG CTACAGGAAA CAGCCGCCAG CATGGAACAG CTAACATCAA CGGTGAAACA AAACTCTGAC AATGCGCGTC AGGCTACGCA GCTGGCAAAA AATGCGTCAG ATACGGCGAA TAAAGGTGGC ACTGTCGTCG ATAATGTCGT GAAAACGATG AATGAGATCG CCGACAGCTC ACAAAAAATC GCCCACATTA CCAGCGTGAT TGATGGTATC GCTTTCCAGA CCAATATTCT GGCACTGAAT GCAGCGGTAG AAGCCGCGCG TGCTGGTGAG CAAGGACGAG GTTTTGCCGT GGTGGCAGGG GAGGTGCGAA CGCTGGCGCA ACGCAGTGCT CAGGCCGCCA AAGAGATCAA AACGCTGATT GATGATTCGG TTAGCCGCAC CAATACTGGC TCTGTGCAGG TAAAAGACGC GGGCGATACG ATGAAAGAAA TCGTCAGCGC CGTGAGTCGG GTAACGGATA TCATGGGGGA AATCGCGTCG GCGTCCGATG AGCAAAGTCG GGGGATCGAG CAGGTCGGGC AGGCGGTCAA TGAAATGGAT CGCGTCACCC AGCAAAACGC CTCGCTGGTG GAGGAATCGG CTTCTGCCGC GGCGGCATTG GAAGAGCAGG CCAGATATTT ACAGAACGCG GTGGCGGTGT TCAAAATTAA TCAATCGGTA GCACAGGAAC ATCGCGCCGA GAGCGCGCCG TCTCTTGCTG CATTACCGAC ATCACTGTTG CCCAAACCCG CATCTGCTGG CTCGGCAAAT GCGAACTGGG AAACGTTTTA G
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Protein sequence | MFKRIKVITI LVILLCVLGI SQFLTGALSV RALINDREGF LVSQRSNQNV AAFTDAWIMM NQTRIAIGSI IQNMMMGNAD KEAMQALLQQ AKTQLAASES SYKHYLSLPN TPGLDDALSK KLEASYTAYD KLLNDIVDSL SGGLAGAAMK LSSGATPLNV AMQDAYITWR AAQNQLSDDG LKENHAAFET MLWLLGALSV VVVLVIILSW IGLQRILLHP LRTLMQHISA IAEGNLTHPI DTTGRNEMSQ LAAGLHHMQQ SLIRTVSLVR DSSHSIHSGA SEISVGSNDL SSRTEQQAAS LQETAASMEQ LTSTVKQNSD NARQATQLAK NASDTANKGG TVVDNVVKTM NEIADSSQKI AHITSVIDGI AFQTNILALN AAVEAARAGE QGRGFAVVAG EVRTLAQRSA QAAKEIKTLI DDSVSRTNTG SVQVKDAGDT MKEIVSAVSR VTDIMGEIAS ASDEQSRGIE QVGQAVNEMD RVTQQNASLV EESASAAAAL EEQARYLQNA VAVFKINQSV AQEHRAESAP SLAALPTSLL PKPASAGSAN ANWETF
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