More than 300 homologs were found in PanDaTox collection
for query gene EcSMS35_1299 on replicon NC_010498
Organism: Escherichia coli SMS-3-5



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
CP001509  ECD_01856  methyl-accepting protein IV  97.19 
 
 
533 aa  1043    Escherichia coli BL21(DE3)  Bacteria  normal  0.293195  n/a   
 
 
-
 
CP001637  EcDH1_1755  methyl-accepting chemotaxis sensory transducer  97.56 
 
 
533 aa  1046    Escherichia coli DH1  Bacteria  normal  0.0930328  n/a   
 
 
-
 
NC_010498  EcSMS35_1299  methyl-accepting protein IV  100 
 
 
533 aa  1073    Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  0.00139959 
 
 
-
 
NC_010658  SbBS512_E2178  methyl-accepting protein IV  97.94 
 
 
533 aa  1051    Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_01845  hypothetical protein  97.19 
 
 
533 aa  1043    Escherichia coli BL21  Bacteria  normal  0.282402  n/a   
 
 
-
 
NC_011353  ECH74115_2623  methyl-accepting protein IV  97.94 
 
 
533 aa  1049    Escherichia coli O157:H7 str. EC4115  Bacteria  normal  hitchhiker  0.0000000448067 
 
 
-
 
NC_010468  EcolC_1747  methyl-accepting protein IV  97.37 
 
 
533 aa  1045    Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A1981  methyl-accepting protein IV  97.37 
 
 
533 aa  1044    Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_2118  methyl-accepting protein IV  97.75 
 
 
533 aa  1046    Escherichia coli E24377A  Bacteria  normal  0.142053  n/a   
 
 
-
 
NC_009436  Ent638_2456  methyl-accepting protein IV  74.11 
 
 
533 aa  790    Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_2982  methyl-accepting chemotaxis sensory transducer  56.02 
 
 
541 aa  547  1e-154  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A3517  methyl-accepting chemotaxis protein  56.12 
 
 
536 aa  506  9.999999999999999e-143  Yersinia pestis Angola  Bacteria  normal  normal  0.549342 
 
 
-
 
NC_009708  YpsIP31758_1643  methyl-accepting chemotaxis protein  56.12 
 
 
536 aa  506  9.999999999999999e-143  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_0513  methyl-accepting chemotaxis sensory transducer  47.87 
 
 
586 aa  422  1e-117  Enterobacter sp. 638  Bacteria  normal  hitchhiker  0.00498581 
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  47.98 
 
 
557 aa  419  1e-116  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  47.98 
 
 
557 aa  419  1e-116  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  47.24 
 
 
566 aa  416  9.999999999999999e-116  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  47.88 
 
 
557 aa  417  9.999999999999999e-116  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_013421  Pecwa_1857  methyl-accepting chemotaxis sensory transducer  47.88 
 
 
561 aa  417  9.999999999999999e-116  Pectobacterium wasabiae WPP163  Bacteria  normal  0.769355  n/a   
 
 
-
 
CP001509  ECD_04232  methyl-accepting chemotaxis protein I, serine sensor receptor  47.34 
 
 
551 aa  409  1e-113  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_04198  hypothetical protein  47.34 
 
 
551 aa  409  1e-113  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2609  methyl-accepting chemotaxis sensory transducer  47.88 
 
 
561 aa  411  1e-113  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  47.53 
 
 
562 aa  410  1e-113  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
CP001637  EcDH1_3642  methyl-accepting chemotaxis sensory transducer  47.34 
 
 
551 aa  408  1.0000000000000001e-112  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_4900  methyl-accepting chemotaxis protein I  46.9 
 
 
554 aa  408  1.0000000000000001e-112  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.979291 
 
 
-
 
NC_009800  EcHS_A4586  methyl-accepting chemotaxis protein I  47.7 
 
 
557 aa  408  1.0000000000000001e-112  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E4893  methyl-accepting chemotaxis protein I  47.15 
 
 
551 aa  406  1.0000000000000001e-112  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3700  methyl-accepting chemotaxis sensory transducer  47.7 
 
 
554 aa  406  1.0000000000000001e-112  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.125609 
 
 
-
 
NC_009832  Spro_2983  methyl-accepting chemotaxis sensory transducer  47.13 
 
 
556 aa  407  1.0000000000000001e-112  Serratia proteamaculans 568  Bacteria  normal  0.96835  normal 
 
 
-
 
NC_010498  EcSMS35_1298  methyl-accepting chemotaxis protein II  47.98 
 
 
553 aa  405  1.0000000000000001e-112  Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  0.00038087 
 
 
-
 
NC_011353  ECH74115_5868  methyl-accepting chemotaxis protein I  46.9 
 
 
554 aa  408  1.0000000000000001e-112  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_4947  methyl-accepting chemotaxis protein I  47.7 
 
 
554 aa  406  1.0000000000000001e-112  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2457  methyl-accepting chemotaxis sensory transducer  46.3 
 
 
555 aa  402  1e-111  Enterobacter sp. 638  Bacteria  normal  0.890786  normal 
 
 
-
 
NC_011149  SeAg_B1203  methyl-accepting chemotaxis protein II  48.08 
 
 
553 aa  396  1e-109  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.697919  n/a   
 
 
-
 
NC_011083  SeHA_C2134  methyl-accepting chemotaxis protein II  48.08 
 
 
553 aa  396  1e-109  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  1.16019e-17 
 
 
-
 
NC_011353  ECH74115_2624  methyl-accepting chemotaxis protein II  48.06 
 
 
553 aa  395  1e-109  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.784316  hitchhiker  0.00000000183949 
 
 
-
 
NC_011205  SeD_A1326  methyl-accepting chemotaxis protein II  48.08 
 
 
553 aa  396  1e-109  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.452066  hitchhiker  2.3261e-17 
 
 
-
 
NC_011094  SeSA_A2074  methyl-accepting chemotaxis protein II  48.08 
 
 
553 aa  396  1e-109  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.162752  hitchhiker  0.000345874 
 
 
-
 
CP001509  ECD_01857  methyl-accepting chemotaxis protein II  47.87 
 
 
553 aa  395  1e-108  Escherichia coli BL21(DE3)  Bacteria  normal  0.13191  n/a   
 
 
-
 
CP001637  EcDH1_1754  methyl-accepting chemotaxis sensory transducer  47.87 
 
 
553 aa  395  1e-108  Escherichia coli DH1  Bacteria  normal  0.0705276  n/a   
 
 
-
 
NC_011080  SNSL254_A2079  methyl-accepting chemotaxis protein II  47.89 
 
 
553 aa  394  1e-108  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.429347  hitchhiker  1.96177e-16 
 
 
-
 
NC_011083  SeHA_C4939  methyl-accepting chemotaxis protein I  46.65 
 
 
553 aa  394  1e-108  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.188217  normal 
 
 
-
 
NC_011080  SNSL254_A4887  methyl-accepting chemotaxis protein I  46.65 
 
 
553 aa  394  1e-108  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A1982  methyl-accepting chemotaxis protein II  47.87 
 
 
553 aa  395  1e-108  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1746  methyl-accepting chemotaxis sensory transducer  47.87 
 
 
553 aa  395  1e-108  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_01846  hypothetical protein  47.87 
 
 
553 aa  395  1e-108  Escherichia coli BL21  Bacteria  normal  0.186429  n/a   
 
 
-
 
NC_009801  EcE24377A_2119  methyl-accepting chemotaxis protein II  47.87 
 
 
553 aa  394  1e-108  Escherichia coli E24377A  Bacteria  normal  0.0158521  n/a   
 
 
-
 
NC_011205  SeD_A4946  methyl-accepting chemotaxis protein I  47.68 
 
 
553 aa  391  1e-107  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.556415 
 
 
-
 
NC_011094  SeSA_A4786  methyl-accepting chemotaxis protein I  46.47 
 
 
553 aa  390  1e-107  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.709187  normal 
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  44.57 
 
 
552 aa  387  1e-106  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_012912  Dd1591_1804  methyl-accepting chemotaxis sensory transducer  46.08 
 
 
562 aa  374  1e-102  Dickeya zeae Ech1591  Bacteria  normal  0.0522685  n/a   
 
 
-
 
NC_011083  SeHA_C3889  methyl-accepting chemotaxis protein I  50.9 
 
 
547 aa  371  1e-101  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3779  methyl-accepting chemotaxis protein  50.9 
 
 
547 aa  371  1e-101  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1159  methyl-accepting chemotaxis sensory transducer  45.37 
 
 
556 aa  370  1e-101  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A3769  methyl-accepting chemotaxis protein I  50.9 
 
 
547 aa  370  1e-101  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_0380  methyl-accepting chemotaxis sensory transducer  46.24 
 
 
549 aa  367  1e-100  Enterobacter sp. 638  Bacteria  normal  0.214895  normal 
 
 
-
 
NC_011205  SeD_A3949  methyl-accepting chemotaxis protein I  50.68 
 
 
547 aa  368  1e-100  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.748503  normal 
 
 
-
 
NC_011080  SNSL254_A3846  methyl-accepting chemotaxis protein I  50.68 
 
 
547 aa  368  1e-100  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_1415  methyl-accepting chemotaxis sensory transducer  43.13 
 
 
546 aa  360  4e-98  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_2108  methyl-accepting chemotaxis sensory transducer  43.16 
 
 
556 aa  359  6e-98  Dickeya dadantii Ech703  Bacteria  normal  0.0190315  n/a   
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  42.91 
 
 
567 aa  349  6e-95  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2952  methyl-accepting chemotaxis sensory transducer  42.78 
 
 
540 aa  347  3e-94  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6908  methyl-accepting chemotaxis sensory transducer  43.18 
 
 
540 aa  344  2.9999999999999997e-93  Burkholderia phytofirmans PsJN  Bacteria  normal  0.740725  normal  0.573307 
 
 
-
 
NC_012917  PC1_1208  methyl-accepting chemotaxis sensory transducer  56.69 
 
 
555 aa  343  5e-93  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000392698  n/a   
 
 
-
 
NC_012917  PC1_3679  methyl-accepting chemotaxis sensory transducer  43.59 
 
 
567 aa  342  1e-92  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3123  methyl-accepting chemotaxis sensory transducer  55.68 
 
 
555 aa  340  4e-92  Pectobacterium wasabiae WPP163  Bacteria  decreased coverage  0.000142041  n/a   
 
 
-
 
NC_013421  Pecwa_3172  methyl-accepting chemotaxis sensory transducer  44.55 
 
 
556 aa  340  5e-92  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1669  methyl-accepting chemotaxis sensory transducer  58.44 
 
 
560 aa  337  5e-91  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1940  methyl-accepting chemotaxis sensory transducer  58.47 
 
 
560 aa  335  1e-90  Pectobacterium wasabiae WPP163  Bacteria  normal  0.364705  n/a   
 
 
-
 
NC_012912  Dd1591_0395  methyl-accepting chemotaxis sensory transducer  51.07 
 
 
556 aa  333  6e-90  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1742  methyl-accepting chemotaxis sensory transducer  42.91 
 
 
579 aa  332  1e-89  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1631  methyl-accepting chemotaxis protein  42.72 
 
 
579 aa  330  5.0000000000000004e-89  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_2259  methyl-accepting chemotaxis sensory transducer  44.55 
 
 
588 aa  329  6e-89  Burkholderia phytofirmans PsJN  Bacteria  normal  0.131825  normal  0.497854 
 
 
-
 
NC_013421  Pecwa_3873  methyl-accepting chemotaxis sensory transducer  42.69 
 
 
575 aa  329  9e-89  Pectobacterium wasabiae WPP163  Bacteria  normal  0.460221  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  55.72 
 
 
583 aa  328  1.0000000000000001e-88  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_010623  Bphy_4305  methyl-accepting chemotaxis sensory transducer  42.54 
 
 
536 aa  328  1.0000000000000001e-88  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A0121  methyl-accepting chemotaxis sensory transducer  42.32 
 
 
618 aa  327  2.0000000000000001e-88  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.487659 
 
 
-
 
NC_010658  SbBS512_E2179  methyl-accepting chemotaxis protein II  68 
 
 
472 aa  328  2.0000000000000001e-88  Shigella boydii CDC 3083-94  Bacteria  normal  0.472287  n/a   
 
 
-
 
NC_009436  Ent638_3407  methyl-accepting chemotaxis sensory transducer  52.49 
 
 
545 aa  327  4.0000000000000003e-88  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0562  methyl-accepting chemotaxis sensory transducer  47.81 
 
 
570 aa  326  6e-88  Dickeya dadantii Ech703  Bacteria  decreased coverage  0.00821394  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  51.65 
 
 
542 aa  326  7e-88  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3813  methyl-accepting chemotaxis sensory transducer  43.85 
 
 
617 aa  326  7e-88  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II2180  methyl-accepting chemotaxis protein  42.45 
 
 
537 aa  324  3e-87  Burkholderia thailandensis E264  Bacteria  normal  0.0470297  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  58.39 
 
 
552 aa  324  3e-87  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  41.3 
 
 
596 aa  324  3e-87  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A1744  methyl-accepting chemotaxis protein III  47.09 
 
 
535 aa  323  4e-87  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.693576  normal  0.460124 
 
 
-
 
NC_007951  Bxe_A2002  methyl-accepting chemotaxis sensory transducer  49.64 
 
 
601 aa  323  6e-87  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_3580  methyl-accepting chemotaxis sensory transducer  54.95 
 
 
572 aa  323  6e-87  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_4161  methyl-accepting chemotaxis sensory transducer  56.54 
 
 
628 aa  323  7e-87  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B1531  methyl-accepting chemotaxis protein III  46.86 
 
 
541 aa  322  9.999999999999999e-87  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A1716  methyl-accepting chemotaxis protein III  46.86 
 
 
541 aa  322  9.999999999999999e-87  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.0288519 
 
 
-
 
NC_011080  SNSL254_A1740  methyl-accepting chemotaxis protein III  46.86 
 
 
541 aa  322  9.999999999999999e-87  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C1804  methyl-accepting chemotaxis protein III  46.86 
 
 
535 aa  322  9.999999999999999e-87  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1119  methyl-accepting chemotaxis sensory transducer  56.15 
 
 
561 aa  321  1.9999999999999998e-86  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B3326  methyl-accepting chemotaxis sensory transducer  51.76 
 
 
547 aa  321  1.9999999999999998e-86  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1816  methyl-accepting chemotaxis sensory transducer  55.52 
 
 
651 aa  321  1.9999999999999998e-86  Dickeya dadantii Ech703  Bacteria  normal  0.700193  n/a   
 
 
-
 
NC_013421  Pecwa_4443  methyl-accepting chemotaxis sensory transducer  54.97 
 
 
630 aa  320  3e-86  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2509  methyl-accepting chemotaxis sensory transducer  55.45 
 
 
557 aa  320  3e-86  Dickeya dadantii Ech703  Bacteria  normal  0.377261  n/a   
 
 
-
 
NC_012912  Dd1591_2937  methyl-accepting chemotaxis sensory transducer  58.17 
 
 
564 aa  320  3e-86  Dickeya zeae Ech1591  Bacteria  normal  0.0948744  n/a   
 
 
-
 
NC_009832  Spro_0080  methyl-accepting chemotaxis sensory transducer  53.73 
 
 
642 aa  320  3.9999999999999996e-86  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>