Gene Dd1591_2086 details

Gene Information

• Locus tag: Dd1591_2086
• ID: 8119563
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: +
• Start bp: 2398315
• End bp: 2400276
• Gene Length: 1962 bp
• Protein Length: 653 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 644852472
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_003004410
• Protein GI: 251789689
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0240769
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGTAT TTGGGAATGC AGTGAGAAAT TTAAAGATCT CTCATAAGCT GTATGGCGGG 
TTTGGTATTG TATTGCTGCT GGTTATTCTG GCATCCGCTT TTAGCTCGGT GCGTTTTTTC 
ATGATTCGGG ACTTGTATAT TAAAAGTTCG ATTATGAATG AAATGGGAAA TTTTATTGAT 
CTTACCCGAA TTGCCCGTAT TAAGTTCACC TATACCCTCA ATAATGACAA TCTCAACAAC 
CTGAATAAGT ATCTGGATCA GGCCCGTCAG TTAAATGAAA AAGCCAATGC ATTGAGCTGG 
GATGAGGCTT ATCAGGCGGA TTTTAAAAAT GTGGCGCAGG ATTTTACGGA TTACGCCAAA 
AATATCGATC GCGTCAAAAG TAGCGTTGAC GGTATGAATG AGGTCACGAA AGATATCGCG 
GCGCTTGACC AGAAAGAAAC CCTGAGTGAT GTGCTTTACA CTACTGCAAA TGATATCAAT 
CTGTTACGTC AGTATCATCA GACTACCGTG CTCTATGCGC AACTGGCGGA TAACGTGCAT 
TTGTTGCAAA AAGAAAGCAG CGATGCGGCG TTTAAAGCGA TGCAGGGCGT TTACTCTCAG 
GCGAAGAAAT CTTTCGATAG TTTGAATGGC GCACTCTCCG CGGAAGCAAA AAATAGTATC 
AGCGAGCTGG GTAACCGAAT TGAGCGTTAC AATCAGAGCG GAGTGAAATA TAACGAGAAG 
GTTAATCAGT TGAAAGCGTC TGATGCCGCG CTCAGAGCGA CAGGGGATAA ACTGATTAAT 
GACATTGATG GCATTCTCAA AAAGATCGGT ACTCGTAACG AAGATATCAT CAATAATTCA 
GTGTTCCAGA CGGTCATTTC CGGCATCATC GCCGCGATGC TGGGATTATT TATTGCCTGG 
TCGGTCACGC GCCAAATTAC CCGACCGGTG ATTGCCAACC TGAAACTGGC GGAGAAGATC 
GCCAGCGGCG ATTTGTCGGC CAGCGTGACG GTGGAGCGCC ACGATGAGCT GGGGCAGTTG 
ACGCTGGCCA TGATGTCGAT GACGGAAAAG CTGCGCCAGT TGATCGCCGA CATTCGGCAT 
AGCGTTTATA GCGTGGCAAA AGCCTCGTCC GATATTGCGG CCGGCAATAA TGACCTCTCG 
TCACGTACCG AACAGCAGTC GTCGGCGATT GTCGAGACTG CCGCCAGTAT GGAACAACTG 
ACCGCTACCG TGAAAAACAA TGCCGACAAT GCTCGCCATG CCAGCCAGAT TTCTGAACAG 
GCGTCTGATA ACGCCAACCG GGGCGGCGAG ATCATTCACA AAGTTGTCCA GACGATGGAT 
GAGATTTCCG GTAGTTCGAA GAAGATTTCC GACATTACCA GCGTCATTAA CAGTATTGCA 
TTCCAGACTA ATATTCTGGC GCTGAACGCG GCGGTGGAAG CGGCGCGCGC AGGGGAGCAA 
GGGCGCGGTT TCGCGGTCGT CGCCGGTGAG GTCCGCAATC TGGCGCAACG CAGTTCGCAG 
GCGGCCAAAG AGATAGAGGG GTTGATTTCA GAATCGGTGA CCCGGGTCAA TACCGGCACG 
GTGCTGGTGT CGGATGCGGG GAGCGCCATG GATGACATTA TGGCATCCGT CAAGCGGGTG 
CACGACATCA TGGGGGAAAT CGCCTCGGCG TCGGATGAGC AGAGCCGCGG CATCGCACAA 
ATAGGCGCGG CGGTATCGGA AATGGATACC ACTATCCAGC AGAACGCGTC AATGGTGCAC 
GAATCATCGG CGGCGTCGAA TTCACTGGAA GATGAAGCGG CGAAGCTGTC GCAACTGGTG 
TCGGTATTCC GTCTGTCGAC ACAGGATGAA TCACAGGCAT CGGGCTATCC GCCGTCGCTG 
AGCAACCACC GGTCACGCCA GGCCGAACCC GCCAATCGGC CGGCGGCGCT GCCTGCCAGC 
CGCGCAACCC GTTCGTCAGC GGATAACTGG ACGACGTTCT GA 

 

Protein sequence

MSVFGNAVRN LKISHKLYGG FGIVLLLVIL ASAFSSVRFF MIRDLYIKSS IMNEMGNFID 
LTRIARIKFT YTLNNDNLNN LNKYLDQARQ LNEKANALSW DEAYQADFKN VAQDFTDYAK 
NIDRVKSSVD GMNEVTKDIA ALDQKETLSD VLYTTANDIN LLRQYHQTTV LYAQLADNVH 
LLQKESSDAA FKAMQGVYSQ AKKSFDSLNG ALSAEAKNSI SELGNRIERY NQSGVKYNEK 
VNQLKASDAA LRATGDKLIN DIDGILKKIG TRNEDIINNS VFQTVISGII AAMLGLFIAW 
SVTRQITRPV IANLKLAEKI ASGDLSASVT VERHDELGQL TLAMMSMTEK LRQLIADIRH 
SVYSVAKASS DIAAGNNDLS SRTEQQSSAI VETAASMEQL TATVKNNADN ARHASQISEQ 
ASDNANRGGE IIHKVVQTMD EISGSSKKIS DITSVINSIA FQTNILALNA AVEAARAGEQ 
GRGFAVVAGE VRNLAQRSSQ AAKEIEGLIS ESVTRVNTGT VLVSDAGSAM DDIMASVKRV 
HDIMGEIASA SDEQSRGIAQ IGAAVSEMDT TIQQNASMVH ESSAASNSLE DEAAKLSQLV 
SVFRLSTQDE SQASGYPPSL SNHRSRQAEP ANRPAALPAS RATRSSADNW TTF