Gene Dd1591_1776 details

Gene Information

• Locus tag: Dd1591_1776
• ID: 8116859
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: -
• Start bp: 2033068
• End bp: 2035032
• Gene Length: 1965 bp
• Protein Length: 654 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 644852169
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_003004107
• Protein GI: 251789386
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.840752
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACCTG CAAGAAAACG TTTTTTTGAC CTGAATGTCT CCAGCAAGCT GTACCTGGGT 
TTTGCCGTCA TTTTACTGTT AGTGGTTCTC TCCTCAGCAC TCGGTGTTTA CCGTTTTTCG 
ACCATCAAAA CGTACTACGG CAAGACCGAC CTGATGCACA ACGTCATCAT GGATATTTTT 
CAGGTCAAGA TCGCCCGAAC CAAGTATTTG GTCAGCAATG ACAATGAGCC TTACGACACC 
ATGCTCAGTT ATAGCCATGA TCTGGCTAAA AACCTTGAAC AGGGGAACCG GCTCTATACG 
GAAAGCGAGT TCAGAGACCC GCTGGTGCGA ATGCAAAAAC ATCTGGTCGC ATTACAGCAA 
TCCATCAACG ACATGGCCCG CGCCAAACAA GCGCTTACCG ACGCAAGCGC CCGGTTTAAT 
CGTATTCCGG TCGATGCAGC CATCTCCCGC TTTCGCCGCA GCCTGGCGAC CATCGCGTTT 
TCATCCGATA ACGACCGGGA AAAAGCCGTC GATCTCACGC TGGCGCTGGC GTCTTACAAC 
GCGACTGCCG ATGCGGTGGT GATTGAACGC ACTCCCGCCT CGCTGAATAC GTTACAAAGC 
CGTTTTAGCG ATATCGAAAA AAATTATCGC GATCTTGCCG CGCAGCTCCC GGCCGATAAG 
CAAACCGCAC TGGATGAATT ATGGAGAAAC CTCGTTAACC TGAAAACGGC TGCAGAAAAT 
TACCTGACCG CTTACAAGGG ATTGTCGGAT GCAGAAGCGG CGGTAAAAAG CGACGGCGAT 
AACGTCAGCA ATATCGCCAA AGAAATCATC CGCCGCCTGG GCGAGATCAA CACCACGCTC 
ACCAGCAACG CCATCACCGG TGCGACGGCT TTTGCCTTAC TGGCGCTGAT ATTCGGCGTA 
CTGGTATCAC GCTATATCAC CCGCCAGATC ACGACGCCGG TGTCCCACAA TCTGGCGCTG 
GCGGAGCGCA TCGCCAGCGG CGACCTGACG GCCCATATCG AAACGAACCG GCGTGATGAA 
CTGGGCCAGT TGACCACAGC CATGGCCGGC ATGAATGGAC GATTACGTCA GATGATCGGC 
GATATCCGCG ACAGCGTTGG CCGTGTGGCG GCCTCAGCGG CGCAAATCGC CCACGGCAAC 
CATGAACTGT CGTCTCGCAC CGAGCAGCAA TCTGCCGCCG TCGTCCAGAC CGCCGCCAGC 
ATGGAGCAGT TAACTTCAAC GGTAAAAAAT AACGCCGACA ACGCCCGCCA TGCCAGCCAG 
ATTGCGGCGG AAGCCTCCAG AGACGCCGAC ACCGGCGGCA ATGTGGTGCA AAACGTCGTT 
AATACCATGC ATGACATCGC CGTCAGTTCG AAAAAAATCG CCGATATTAC CGATGTCATC 
AACAGCATCG CTTTCCAGAC CAACATTCTG GCGCTGAACG CTGCTGTGGA AGCAGCTCGT 
GCCGGCGAAC AAGGACGAGG TTTCGCCGTC GTCGCCGGCG AAGTACGCAA TCTGGCGCAA 
CGCAGTGCTC AGGCCGCACG TGAAATCGCG TCTCTGATTG CCGAGTCAGT GAGCCGTATC 
GATGCCGGAG CCATGCTGGC GGCGGAAGCA GGAGACGCCA TGCAGAAAAT CCTGCGTTCG 
GTTTCCCGTG TTAACGATAT CATCGGCGAT ATTGCCGCCG CATCCGATGA ACAACGCCGC 
GGTATTGAAC AAATCGCCGA CGCAGTCAGC GAACTGGATG CCACCACCCA GCAAAACGCC 
TCGTTGGTTA CCGCATCGGC CTCCTCCGCC AGTTCGCTGG AAGAACAATC CGTACAACTG 
GCAGCGCTGG TGAGTCATTT CCGCCTGACG CAGAATGTGC AGCAAGAACG CCACCAGCTC 
ATGCCGCCGC CCGCCAGCCG CACGCTTCTC CCGGCCGCAG ATCAAGCCCG GCCGACGTTA 
ACCCACAACG CGCGCCAAAG CCAACAGAAC TGGGAAAGCT TTTAG 

 

Protein sequence

MAPARKRFFD LNVSSKLYLG FAVILLLVVL SSALGVYRFS TIKTYYGKTD LMHNVIMDIF 
QVKIARTKYL VSNDNEPYDT MLSYSHDLAK NLEQGNRLYT ESEFRDPLVR MQKHLVALQQ 
SINDMARAKQ ALTDASARFN RIPVDAAISR FRRSLATIAF SSDNDREKAV DLTLALASYN 
ATADAVVIER TPASLNTLQS RFSDIEKNYR DLAAQLPADK QTALDELWRN LVNLKTAAEN 
YLTAYKGLSD AEAAVKSDGD NVSNIAKEII RRLGEINTTL TSNAITGATA FALLALIFGV 
LVSRYITRQI TTPVSHNLAL AERIASGDLT AHIETNRRDE LGQLTTAMAG MNGRLRQMIG 
DIRDSVGRVA ASAAQIAHGN HELSSRTEQQ SAAVVQTAAS MEQLTSTVKN NADNARHASQ 
IAAEASRDAD TGGNVVQNVV NTMHDIAVSS KKIADITDVI NSIAFQTNIL ALNAAVEAAR 
AGEQGRGFAV VAGEVRNLAQ RSAQAAREIA SLIAESVSRI DAGAMLAAEA GDAMQKILRS 
VSRVNDIIGD IAAASDEQRR GIEQIADAVS ELDATTQQNA SLVTASASSA SSLEEQSVQL 
AALVSHFRLT QNVQQERHQL MPPPASRTLL PAADQARPTL THNARQSQQN WESF