Gene Dd1591_2327 details

Gene Information

• Locus tag: Dd1591_2327
• ID: 8118932
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: +
• Start bp: 2662790
• End bp: 2664757
• Gene Length: 1968 bp
• Protein Length: 655 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 644852712
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_003004648
• Protein GI: 251789927
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein
• TIGRFAM ID: [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.716134
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGGTTAA GCAGCGCGAT AAAAAACACC AAAATCTCTC ATAAACTCTA CCTGGGATTC 
GGCGTGGTGT TATTTCTGGT GATCATAGCG TCCACTCTCA GCGCTATGCG CTTTCGTGAC 
ATTCGAGATA TCTACGAAAA AACCAACCTG ATTTACAACA TCAACATTGA AGTTTTTCAG 
GCCAAAATTA ATCGCCTTAA ATATTTCTAT ACTCCCGATG ACAGTACTCA GACCGTATTA 
ACGGGCTTCG TCAAACATGC GGCTGAGCTG ACTCAAAGCG CTCATACCTT GTCCTGGCAT 
AGCGATGAAT TGGGTTATAT CAATGATCTG GATAAGATCA TGGTGGATTT CCAAAAGTCA 
GTCGCCGATA TGTCGACATC CACGCAACAG GTTGTCGCAC TGAGAAAACA AATCGCCGCG 
TTAAATACGC AAAATGCCGT CAAAACCTTC CGTGACGGCC TGCAAACCCA GCAACTGGAC 
CAGGCGTTAC TCCACCGTAT AGAAGAATTG GCATACGCCG CGGAATCACT GAAAAACCTC 
GCTTATGAGT TGCAGCTTGC AGGTACCGAT GATGCCGTCA AAGCGTTTAA TGGCCGTTAT 
GCCGAAACAC AAAAAATTTA TCAGGACCTA CAACCCATAC TCTCCGGCGA CAGCCAGAAA 
CTCACGGAGG CGCTCCGGAA ATACACCTCA CAATACGCCG CACTGAATCA GGACTACATC 
CGCGCCTGGG GCGAGCTGAA GAAAGCAGAA AATGCGGTAA AAACCGGCGG TGATAAAAGT 
AGTGCGGTGA TCAAATCCTT AATTACCGTG GTAAAAAACA AAAACGATGC GCTGGCGTAC 
GGCTCAGCCA ACGTAACGCT GCTGATTGGC GTCATCGCGG TCATCATCGG TATTTTGATT 
GCCGTTTACA TCATTCGTCA GATAACCCGC CCGGTGATGC ATAATCTGAT GCTGGCTGAA 
CGCATCGCCA GCGGTGACCT GACCGCCACC ATCGAAGTGG ACCGCCACGA CGAACTGGGC 
AAGTTGACCG CCGCGATGGC CGCCATGAAC AATCGCCTGC GGCAGATGAT TTCCGATGTG 
CGCGACAGCG TAGCGCATGT CACGCATTCG GCGGCCGACA TTGCCGCCGG CAACAGCGAT 
CTCGCCTCAC GCACCGAGCA ACAATCGGCC GCAGTGGTGC AAACCGCCGC CAGCATGGAA 
GAGTTGACCT CAACGGTGAA AAACAACACC GAAAACGCCC GTCATGCCAG CCAGATTGCG 
TCCGATGCAT CGAGAAATGC ACATAAAGGC GGCGAAGTGG TACAGAATGT GGTGAAAACG 
ATGGATGACA TTGCCGCCAG TTCTCGCAAA ATCGCCGATA TCACCGCCGT CATCAATAGC 
ATCGCTTTCC AAACCAATAT TCTGGCGCTC AATGCGGCGG TGGAAGCCGC CCGTGCCGGT 
GAACAAGGGC GCGGTTTTGC CGTAGTGGCT GGTGAAGTGC GTAGTCTTTC CCAGCGCAGC 
TCACAGGCAG CAAAAGATAT CGCAGCCTTG ATAACCGAAT CGGTAGAACG CACTAACGCA 
GGGAGTACGC TGGTGGCCGA AGCAGGGCAA ACCATGGATA GCATCGTTAA ATCGGTATCC 
CGCGTTAACG ATATCATGGG TGAGATCTCC TCTGCGTCGG AAGAGCAAGG CCGGGGTATC 
GAACAGATTT CCCGTGCCAT TACCGAATTG GATAGCACGA CCCAACAAAA CGCCACGCTG 
GTTTCGCAGT CATCATCTGC CGCCAATACA CTGGAAGAAC AGGCTATGTT GCTGGAAAAA 
CTGGTGGCGA CCTTCCGGCT GTCGGACTCC CCGACTGCCT CGTCGCACAC GGTTGCATCA 
CTGAACACGC CGCGTCGTCC GGTGCAGGCT CTGCCCGCCG CCGGTAAGAG TAAAGCATTA 
GCGAAACCCG ACGCCAAAGG TCATCAGGAC GACTGGGCTT CTTTTTGA 

 

Protein sequence

MGLSSAIKNT KISHKLYLGF GVVLFLVIIA STLSAMRFRD IRDIYEKTNL IYNINIEVFQ 
AKINRLKYFY TPDDSTQTVL TGFVKHAAEL TQSAHTLSWH SDELGYINDL DKIMVDFQKS 
VADMSTSTQQ VVALRKQIAA LNTQNAVKTF RDGLQTQQLD QALLHRIEEL AYAAESLKNL 
AYELQLAGTD DAVKAFNGRY AETQKIYQDL QPILSGDSQK LTEALRKYTS QYAALNQDYI 
RAWGELKKAE NAVKTGGDKS SAVIKSLITV VKNKNDALAY GSANVTLLIG VIAVIIGILI 
AVYIIRQITR PVMHNLMLAE RIASGDLTAT IEVDRHDELG KLTAAMAAMN NRLRQMISDV 
RDSVAHVTHS AADIAAGNSD LASRTEQQSA AVVQTAASME ELTSTVKNNT ENARHASQIA 
SDASRNAHKG GEVVQNVVKT MDDIAASSRK IADITAVINS IAFQTNILAL NAAVEAARAG 
EQGRGFAVVA GEVRSLSQRS SQAAKDIAAL ITESVERTNA GSTLVAEAGQ TMDSIVKSVS 
RVNDIMGEIS SASEEQGRGI EQISRAITEL DSTTQQNATL VSQSSSAANT LEEQAMLLEK 
LVATFRLSDS PTASSHTVAS LNTPRRPVQA LPAAGKSKAL AKPDAKGHQD DWASF