| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0831 |
|---|
| Symbol | |
|---|
| ID | 4668159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 901967 |
|---|
| End bp | 903652 |
|---|
| Gene Length | 1686 bp |
|---|
| Protein Length | 561 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639822030 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_969203 |
|---|
| Protein GI | 120609525 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.236088 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.180731 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATTC TGGGACGCCT ATCGATCCGC ACGCGCCTGT ACTTCGGCAC GGTCTTTTCC
CTGGTGCTGC TCATCGTGAT CGGAGGGCTG GGATACCTGG CCCTCGACCG CACGCGCGAT
ACGCTGCAGG TGCTTTTTTC CGAGCGGGTG CAGACGCTGA CCGACATGGC CGACCTGCGC
ACGACGCTGG GGACGCTGCG CCGCACCGAG AAGGACATCA TCCTCAACTT CAACAATTCC
GTCGAAGTAG CCGCCCAGCG CGAAACCTGG GCCAGGACCC TGGCCGCGCT GCGCAAGAGC
CTCACGGCCG TGCGGCAGGT GCAGGCAGGC GACCCGGCCT TCGCGGGCTC CATCGACAAG
GCGCTGGCCG AGATCCAGCA GTACGAGGCC GGCATTTCCC CGATCTTCGA GCAGATCGAG
CGGGCGCAGC TCGACGGGGC CGGCGGCGCC GCCTATGCCG ACCGCCTGAA GAGCCACATG
GAAACCACCG ACCAGATCCT CGCGAGCCTC GCTCAGAGCG CCCGCGAGAA CATGGAGGAG
GCGCGGCAGG GCGTGGAGGC GCGCACCGCC ACCATGTCCG CGGTGATCGG CGGCGGGCTG
GTGCTGGCCC TGGCGGTGCT GATCCCGCTC ACCTTCTTCA GCGTGCGCTC CATCACCGGT
TCCCTGGCCC AGGCCCGCTC ACTGGCCGAA CGCATCGCCG GCGGGGACCT GTCGCATGAA
GTCCGGCCCG CCCAGATGGA CGAGGTCGGC CAGCTCGTCG TGGCCATGGG GCGCATGCAG
GACGCACTGC GCGGCCTGGT GCGCCAGGTG CAGGACGCGT CCGGCAGCAT CTCGACGGCC
AGCACGGAGA TCGCCTCGGG CAACCACGAC CTGAGCCACC GCACCGAGCA GACCGCCGCC
AACCTGGAGG AAACCGCCTC GTCCATGGAA ATGCTCGCCG GCACGGTGCA GCAGAGCACC
CAGTCCGCAC GCCAGGCCAG CGACTTCGCG TCCACCGCGG CCCAGGTGGC GGCCAAGGGC
GGCAGCGTGG TTTCGCAGGT CGTGGACACC ATGGGCCAGA TCACCGACAG CTCGCGCAGG
ATCGCCGACA TCACCGGCGT GATCGATTCC ATCGCCTTCC AGACCAACAT CCTGGCGCTG
AATGCCGCCG TCGAGGCGGC CCGCGCGGGC GAGCAGGGCC GCGGCTTCGC GGTGGTCGCG
GCCGAGGTGC GGACGCTGGC CCAGCGCTCG GCCTCGGCGG CCAAGGAAAT CAAGGAGCTC
ATCGGCTCCT CGGTGGAGCG CGTGGAAAGC GGCTCGCGCC TCGTGAGCCA GGCCGGCGCG
ACCATGACCG AGATCGTGGA CAGCGTGCGC CGCGTCTCCG AAATGATCAC GGAGATCACC
GCCTCGTCGG CCGAGCAGAG CGACAACATC GGCCAGATCA GCCAGTCCGT GAGCCAGCTC
GACCAGATGA CCCAGCAGAA CGCCGCGCTG GTGGAGCAGT CCACGGCCGC ATCGGAGTCG
CTGCGGGAGC AGGCGGTGCA ACTGATTGGC GCCGTGCGCC GGTTCCGCCT CGACGACGGT
CCGGCGGCGG ACATCGCCCT GCAGGCACCG CCCCCGCCTG GTGCCGCCTC CCTGGCGCCA
CGGCCCCTGG CCGCCGCCCT GCCCGGGCCG GTGTCCGGAT TCGTGCGCCA CGAACCTGCC
GCCTGA
|
|---|
| Protein sequence | MDILGRLSIR TRLYFGTVFS LVLLIVIGGL GYLALDRTRD TLQVLFSERV QTLTDMADLR
TTLGTLRRTE KDIILNFNNS VEVAAQRETW ARTLAALRKS LTAVRQVQAG DPAFAGSIDK
ALAEIQQYEA GISPIFEQIE RAQLDGAGGA AYADRLKSHM ETTDQILASL AQSARENMEE
ARQGVEARTA TMSAVIGGGL VLALAVLIPL TFFSVRSITG SLAQARSLAE RIAGGDLSHE
VRPAQMDEVG QLVVAMGRMQ DALRGLVRQV QDASGSISTA STEIASGNHD LSHRTEQTAA
NLEETASSME MLAGTVQQST QSARQASDFA STAAQVAAKG GSVVSQVVDT MGQITDSSRR
IADITGVIDS IAFQTNILAL NAAVEAARAG EQGRGFAVVA AEVRTLAQRS ASAAKEIKEL
IGSSVERVES GSRLVSQAGA TMTEIVDSVR RVSEMITEIT ASSAEQSDNI GQISQSVSQL
DQMTQQNAAL VEQSTAASES LREQAVQLIG AVRRFRLDDG PAADIALQAP PPPGAASLAP
RPLAAALPGP VSGFVRHEPA A
|
|---|
| |