More than 300 homologs were found in PanDaTox collection
for query gene Rpic12D_1092 on replicon NC_012856
Organism: Ralstonia pickettii 12D



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003295  RSc1156  methyl-accepting chemotaxis transducer transmembrane protein  74.71 
 
 
600 aa  711    Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.579054 
 
 
-
 
NC_012856  Rpic12D_1092  methyl-accepting chemotaxis sensory transducer  100 
 
 
605 aa  1192    Ralstonia pickettii 12D  Bacteria  normal  normal  0.703119 
 
 
-
 
NC_010682  Rpic_0996  methyl-accepting chemotaxis sensory transducer  92.23 
 
 
601 aa  1037    Ralstonia pickettii 12J  Bacteria  normal  0.947036  normal  0.198959 
 
 
-
 
NC_007974  Rmet_4195  methyl-accepting chemotaxis sensory transducer  54.74 
 
 
515 aa  498  1e-139  Cupriavidus metallidurans CH34  Bacteria  normal  0.766107  normal 
 
 
-
 
NC_010625  Bphy_5591  methyl-accepting chemotaxis sensory transducer  52.82 
 
 
519 aa  496  1e-139  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_6127  methyl-accepting chemotaxis sensory transducer  53.49 
 
 
519 aa  478  1e-134  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0128017 
 
 
-
 
NC_010557  BamMC406_5887  methyl-accepting chemotaxis sensory transducer  53.1 
 
 
519 aa  475  1e-132  Burkholderia ambifaria MC40-6  Bacteria  normal  0.330697  normal 
 
 
-
 
NC_010681  Bphyt_3813  methyl-accepting chemotaxis sensory transducer  42.99 
 
 
617 aa  385  1e-105  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A0121  methyl-accepting chemotaxis sensory transducer  41.9 
 
 
618 aa  382  1e-104  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.487659 
 
 
-
 
NC_008390  Bamb_0171  methyl-accepting chemotaxis sensory transducer  40.37 
 
 
648 aa  365  2e-99  Burkholderia ambifaria AMMD  Bacteria  normal  0.451768  n/a   
 
 
-
 
NC_007434  BURPS1710b_0074  methyl-accepting chemotaxis protein I  46.1 
 
 
673 aa  363  5.0000000000000005e-99  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2857  methyl-accepting chemotaxis protein, putative  46.1 
 
 
673 aa  362  8e-99  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3934  methyl-accepting chemotaxis protein  46.1 
 
 
673 aa  362  8e-99  Burkholderia pseudomallei 1106a  Bacteria  normal  0.3175  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3433  putative methyl-accepting chemotaxis protein  46.1 
 
 
673 aa  362  8e-99  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1686  putative methyl-accepting chemotaxis protein  46.1 
 
 
673 aa  362  1e-98  Burkholderia mallei NCTC 10229  Bacteria  normal  0.303273  n/a   
 
 
-
 
NC_009080  BMA10247_3118  putative methyl-accepting chemotaxis protein  46.1 
 
 
673 aa  362  1e-98  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0285227  n/a   
 
 
-
 
NC_009074  BURPS668_3853  methyl-accepting chemotaxis protein II  46.1 
 
 
671 aa  362  1e-98  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3360  methyl-accepting chemotaxis sensory transducer  44.22 
 
 
655 aa  361  2e-98  Burkholderia sp. 383  Bacteria  normal  0.139099  normal 
 
 
-
 
NC_010681  Bphyt_0620  methyl-accepting chemotaxis sensory transducer  42.94 
 
 
549 aa  359  8e-98  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0437284 
 
 
-
 
NC_011094  SeSA_A3769  methyl-accepting chemotaxis protein I  42.26 
 
 
547 aa  359  9e-98  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_0184  methyl-accepting chemotaxis sensory transducer  40.43 
 
 
648 aa  358  9.999999999999999e-98  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C3889  methyl-accepting chemotaxis protein I  42.26 
 
 
547 aa  358  9.999999999999999e-98  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A3846  methyl-accepting chemotaxis protein I  42.26 
 
 
547 aa  358  1.9999999999999998e-97  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3779  methyl-accepting chemotaxis protein  42.26 
 
 
547 aa  357  1.9999999999999998e-97  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  40.2 
 
 
567 aa  357  5e-97  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_1298  methyl-accepting chemotaxis protein II  43.88 
 
 
553 aa  356  7.999999999999999e-97  Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  0.00038087 
 
 
-
 
NC_009436  Ent638_2457  methyl-accepting chemotaxis sensory transducer  44.55 
 
 
555 aa  354  2e-96  Enterobacter sp. 638  Bacteria  normal  0.890786  normal 
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  41.28 
 
 
552 aa  353  2.9999999999999997e-96  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_010622  Bphy_2972  methyl-accepting chemotaxis sensory transducer  47.17 
 
 
597 aa  353  5e-96  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.00113075 
 
 
-
 
NC_011205  SeD_A3949  methyl-accepting chemotaxis protein I  41.89 
 
 
547 aa  353  5.9999999999999994e-96  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.748503  normal 
 
 
-
 
NC_010622  Bphy_0345  methyl-accepting chemotaxis sensory transducer  42.42 
 
 
547 aa  353  7e-96  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I3180  methyl-accepting chemotaxis protein, putative  45.33 
 
 
666 aa  350  3e-95  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  42.38 
 
 
566 aa  350  3e-95  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
CP001509  ECD_01857  methyl-accepting chemotaxis protein II  43.4 
 
 
553 aa  348  2e-94  Escherichia coli BL21(DE3)  Bacteria  normal  0.13191  n/a   
 
 
-
 
CP001637  EcDH1_1754  methyl-accepting chemotaxis sensory transducer  43.4 
 
 
553 aa  348  2e-94  Escherichia coli DH1  Bacteria  normal  0.0705276  n/a   
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  59.16 
 
 
557 aa  348  2e-94  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_01846  hypothetical protein  43.4 
 
 
553 aa  348  2e-94  Escherichia coli BL21  Bacteria  normal  0.186429  n/a   
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  59.16 
 
 
557 aa  348  2e-94  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1746  methyl-accepting chemotaxis sensory transducer  43.4 
 
 
553 aa  348  2e-94  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A1982  methyl-accepting chemotaxis protein II  43.4 
 
 
553 aa  348  2e-94  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1159  methyl-accepting chemotaxis sensory transducer  45.38 
 
 
556 aa  347  3e-94  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_2624  methyl-accepting chemotaxis protein II  43.22 
 
 
553 aa  347  3e-94  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.784316  hitchhiker  0.00000000183949 
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  58.81 
 
 
557 aa  347  4e-94  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_009801  EcE24377A_2119  methyl-accepting chemotaxis protein II  43.84 
 
 
553 aa  347  4e-94  Escherichia coli E24377A  Bacteria  normal  0.0158521  n/a   
 
 
-
 
NC_012912  Dd1591_1804  methyl-accepting chemotaxis sensory transducer  45.29 
 
 
562 aa  346  7e-94  Dickeya zeae Ech1591  Bacteria  normal  0.0522685  n/a   
 
 
-
 
NC_007951  Bxe_A4080  methyl-accepting chemotaxis sensory transducer  43.75 
 
 
549 aa  345  1e-93  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_2983  methyl-accepting chemotaxis sensory transducer  54.47 
 
 
556 aa  343  4e-93  Serratia proteamaculans 568  Bacteria  normal  0.96835  normal 
 
 
-
 
NC_011080  SNSL254_A4887  methyl-accepting chemotaxis protein I  45.69 
 
 
553 aa  342  8e-93  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C4939  methyl-accepting chemotaxis protein I  45.69 
 
 
553 aa  342  8e-93  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.188217  normal 
 
 
-
 
NC_010084  Bmul_0167  methyl-accepting chemotaxis sensory transducer  44.42 
 
 
659 aa  342  1e-92  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.677561 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  55.79 
 
 
562 aa  341  2.9999999999999998e-92  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_013421  Pecwa_1857  methyl-accepting chemotaxis sensory transducer  40.83 
 
 
561 aa  341  2.9999999999999998e-92  Pectobacterium wasabiae WPP163  Bacteria  normal  0.769355  n/a   
 
 
-
 
NC_012912  Dd1591_0395  methyl-accepting chemotaxis sensory transducer  40.97 
 
 
556 aa  340  4e-92  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2969  methyl-accepting chemotaxis sensory transducer  43.7 
 
 
550 aa  340  4e-92  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A4786  methyl-accepting chemotaxis protein I  56.61 
 
 
553 aa  340  5e-92  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.709187  normal 
 
 
-
 
NC_013421  Pecwa_3172  methyl-accepting chemotaxis sensory transducer  42.83 
 
 
556 aa  340  5e-92  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3580  methyl-accepting chemotaxis sensory transducer  40.87 
 
 
572 aa  339  8e-92  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  57.02 
 
 
591 aa  339  8e-92  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
CP001637  EcDH1_3642  methyl-accepting chemotaxis sensory transducer  44.02 
 
 
551 aa  339  9e-92  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_04232  methyl-accepting chemotaxis protein I, serine sensor receptor  44.02 
 
 
551 aa  339  9.999999999999999e-92  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3723  methyl-accepting chemotaxis sensory transducer  49.62 
 
 
539 aa  339  9.999999999999999e-92  Dickeya zeae Ech1591  Bacteria  normal  0.359916  n/a   
 
 
-
 
NC_012892  B21_04198  hypothetical protein  44.02 
 
 
551 aa  339  9.999999999999999e-92  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A4946  methyl-accepting chemotaxis protein I  56.32 
 
 
553 aa  339  9.999999999999999e-92  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.556415 
 
 
-
 
NC_010498  EcSMS35_4900  methyl-accepting chemotaxis protein I  43.78 
 
 
554 aa  338  1.9999999999999998e-91  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.979291 
 
 
-
 
NC_012912  Dd1591_2408  methyl-accepting chemotaxis sensory transducer  41.84 
 
 
557 aa  338  1.9999999999999998e-91  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3700  methyl-accepting chemotaxis sensory transducer  43.78 
 
 
554 aa  338  1.9999999999999998e-91  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.125609 
 
 
-
 
NC_012912  Dd1591_2406  methyl-accepting chemotaxis sensory transducer  42.19 
 
 
559 aa  338  1.9999999999999998e-91  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_5868  methyl-accepting chemotaxis protein I  44.42 
 
 
554 aa  337  2.9999999999999997e-91  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_4947  methyl-accepting chemotaxis protein I  44.42 
 
 
554 aa  337  3.9999999999999995e-91  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A4586  methyl-accepting chemotaxis protein I  44.42 
 
 
557 aa  337  3.9999999999999995e-91  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  47.34 
 
 
589 aa  337  3.9999999999999995e-91  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_008782  Ajs_3659  methyl-accepting chemotaxis sensory transducer  43.58 
 
 
550 aa  337  3.9999999999999995e-91  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  57.14 
 
 
583 aa  336  7.999999999999999e-91  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_008752  Aave_0831  methyl-accepting chemotaxis sensory transducer  41.3 
 
 
561 aa  336  7.999999999999999e-91  Acidovorax citrulli AAC00-1  Bacteria  normal  0.236088  normal  0.180731 
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  47.23 
 
 
580 aa  336  9e-91  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0995  methyl-accepting chemotaxis sensory transducer  56.11 
 
 
621 aa  336  9e-91  Ralstonia pickettii 12J  Bacteria  normal  normal  0.203772 
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  49.51 
 
 
584 aa  335  1e-90  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C2134  methyl-accepting chemotaxis protein II  40.54 
 
 
553 aa  335  1e-90  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  1.16019e-17 
 
 
-
 
NC_011094  SeSA_A2074  methyl-accepting chemotaxis protein II  40.54 
 
 
553 aa  335  1e-90  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.162752  hitchhiker  0.000345874 
 
 
-
 
NC_011205  SeD_A1326  methyl-accepting chemotaxis protein II  40.54 
 
 
553 aa  335  1e-90  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.452066  hitchhiker  2.3261e-17 
 
 
-
 
NC_010508  Bcenmc03_0240  methyl-accepting chemotaxis sensory transducer  43.6 
 
 
657 aa  335  1e-90  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0244017  normal 
 
 
-
 
NC_010658  SbBS512_E4893  methyl-accepting chemotaxis protein I  43.84 
 
 
551 aa  335  1e-90  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc1155  methyl-accepting chemotaxis transducer transmembrane protein  54.21 
 
 
629 aa  335  2e-90  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.852924 
 
 
-
 
NC_011149  SeAg_B1203  methyl-accepting chemotaxis protein II  40.37 
 
 
553 aa  335  2e-90  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.697919  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  40.78 
 
 
572 aa  335  2e-90  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_008782  Ajs_1017  methyl-accepting chemotaxis sensory transducer  59.49 
 
 
591 aa  335  2e-90  Acidovorax sp. JS42  Bacteria  normal  0.696887  normal 
 
 
-
 
NC_012880  Dd703_3560  methyl-accepting chemotaxis sensory transducer  57.33 
 
 
538 aa  333  4e-90  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0380  methyl-accepting chemotaxis sensory transducer  56.48 
 
 
539 aa  333  4e-90  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A2079  methyl-accepting chemotaxis protein II  40.54 
 
 
553 aa  333  5e-90  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.429347  hitchhiker  1.96177e-16 
 
 
-
 
NC_008060  Bcen_2849  methyl-accepting chemotaxis sensory transducer  44.74 
 
 
659 aa  333  5e-90  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0258  methyl-accepting chemotaxis sensory transducer  44.74 
 
 
659 aa  333  5e-90  Burkholderia cenocepacia HI2424  Bacteria  decreased coverage  0.00414638  n/a   
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  48.1 
 
 
661 aa  332  8e-90  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1535  methyl-accepting chemotaxis sensory transducer  53.28 
 
 
574 aa  332  8e-90  Dickeya zeae Ech1591  Bacteria  normal  0.241891  n/a   
 
 
-
 
NC_009436  Ent638_0513  methyl-accepting chemotaxis sensory transducer  41.86 
 
 
586 aa  332  9e-90  Enterobacter sp. 638  Bacteria  normal  hitchhiker  0.00498581 
 
 
-
 
NC_012856  Rpic12D_1408  methyl-accepting chemotaxis sensory transducer  44.76 
 
 
513 aa  332  1e-89  Ralstonia pickettii 12D  Bacteria  normal  0.0312904  normal  0.0311205 
 
 
-
 
NC_012917  PC1_1208  methyl-accepting chemotaxis sensory transducer  55.49 
 
 
555 aa  332  1e-89  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000392698  n/a   
 
 
-
 
NC_013421  Pecwa_0431  methyl-accepting chemotaxis sensory transducer  56.48 
 
 
539 aa  331  2e-89  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  41.16 
 
 
596 aa  332  2e-89  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2308  methyl-accepting chemotaxis sensory transducer  40.82 
 
 
560 aa  332  2e-89  Dickeya dadantii Ech703  Bacteria  normal  0.52721  n/a   
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  52.02 
 
 
527 aa  331  2e-89  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
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