| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4195 |
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| Symbol | cheD |
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| ID | 4041053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 779982 |
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| End bp | 781529 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637979618 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_586331 |
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| Protein GI | 94313122 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.766107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAACC TGAGCATCCG CCACGGCCTG CTGGCGACCC TGGTGATTTT CGGCCTGATG
ATCGTGTTTG GCGCCGCGCT GGGCGTGACC CAGTTGTACG CAGCCAGCGA GTCCGCGGAG
GACATGCATC AGGTATCGGC GCACGTGCAG TTGCTTAACA GCGCCTACAA GGACATGACA
CGCGCGCGCG CTGCGCTGAC GCGTGCGTAC AACTCGGCCA AAGCTGGCGG CGGCATCAAC
GCCGAGGCAA TCGGCAATGC GGAGGGCTCG ATCCGCAAGT CCACCGATGC GTTGGAACGC
TTTGCCAGCG CGCCTGTCCT GGAGGGCCTG GATGCCTCGG CACGCGACGG CATGGTTGCT
GTCGCACGGG CACACAATGA CGCTGTGCAA CGGGGACTCG AAGCATTGCG TAAGGATGAT
CCCGATGGCT TCGTGGCGAT CAACGACAAG GACATCACCG CGACAGGTAT GAAGTATTCA
GCTGATGTCG AGCGTTTCGA GGCGCTCGCC ACCCAGCACA CTGAAGCCGT GATCGCCAGG
ATCAGCACCC GTTTCAACCG GGTGCTGATC CTGGTGTGTG TCGGCATGGT GGCGTCGGTG
CTGCTGATCG TGGTCGTGCA TCTGGCGCTG CGCAAGCTGG TTGTGGCGCC GCTGCACCAG
GCGTGCGACC TGATCATGCG CGTGGCGGAC GGCGATCTGA CGATCAAGGT GCCCGAAGCC
GGCCGCAATG AAATCGGACA GTTGCTGCGC GCGCTGTCGC GAATGCAGCA TGGGCTGACG
GACACCGTGG CGAAGGTGCG GGCGGGCTCC GATGCGGTGA CAACAGGCGC GCGGGAGATT
GCCGCGGGCA ATACCGACCT GTCGTCGCGT ACCGAGCAGC AATCGTCGGC GCTGGAGCAG
ACGGCCGCCA GCATGGAGGA GTTGACGTCG ACGGTGGCCA ATAACGCGGA GAGCGCCACG
CGCGCCAGCG GCCTGGCCCG CGATGCGGCG GATCTGGCAT CGCGCGGTGG CGAGGTGGTG
CGTGGCGTGG TGCAGACGAT GAGCGAGATC AACGCCAGCT CGCAGAAGAT CGTGGACATC
ATCGCCGTAA TCGACGGCAT TGCATTCCAG ACCAACATCC TTGCGCTCAA TGCCGCCGTG
GAAGCGGCAC GTGCTGGCGA GCAGGGTCGC GGTTTCGCGG TGGTGGCTGG CGAGGTGCGC
GCGCTGGCTC AGCGCAGCGC AGGAGCCGCC AAGGAGATCA AGTCGTTGAT CGATTCGTCC
GTCGACAAGG TAGGCGCCGG CAGCGCGCAG GTAGAGCAGG CCGGCAGCAC GATCGAGGAC
ATCGTGGTGG CCGTGCGGCG ACTGGCCGAT ACCGTCAACG AGATCTCGGC TGCATCGATC
GAACAGTCTT CAGGTATCTC GCAGGTCAGC GAGGCGGTGT CGCAGATGGA GCAGGTGAAC
CAGCAGAACG CTGCATTGGT GGAGCAGGCT GCTGCTGCCG CAGATTCGCT CGAATCCCAT
GCCAACCAGC TTGCCGCCGC CGTGACAACG TTCAAGCTGG CGGCTTGA
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| Protein sequence | MNNLSIRHGL LATLVIFGLM IVFGAALGVT QLYAASESAE DMHQVSAHVQ LLNSAYKDMT
RARAALTRAY NSAKAGGGIN AEAIGNAEGS IRKSTDALER FASAPVLEGL DASARDGMVA
VARAHNDAVQ RGLEALRKDD PDGFVAINDK DITATGMKYS ADVERFEALA TQHTEAVIAR
ISTRFNRVLI LVCVGMVASV LLIVVVHLAL RKLVVAPLHQ ACDLIMRVAD GDLTIKVPEA
GRNEIGQLLR ALSRMQHGLT DTVAKVRAGS DAVTTGAREI AAGNTDLSSR TEQQSSALEQ
TAASMEELTS TVANNAESAT RASGLARDAA DLASRGGEVV RGVVQTMSEI NASSQKIVDI
IAVIDGIAFQ TNILALNAAV EAARAGEQGR GFAVVAGEVR ALAQRSAGAA KEIKSLIDSS
VDKVGAGSAQ VEQAGSTIED IVVAVRRLAD TVNEISAASI EQSSGISQVS EAVSQMEQVN
QQNAALVEQA AAAADSLESH ANQLAAAVTT FKLAA
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