| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0553 |
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| Symbol | |
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| ID | 3762373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 619077 |
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| End bp | 621743 |
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| Gene Length | 2667 bp |
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| Protein Length | 888 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637785266 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_390823 |
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| Protein GI | 78484898 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGA ATAATGGGCC TGTTACACAA AAAGAATACC CTCTAAAAGA GGGAATGACC
ATTGTGTCCA GAACGGACTT ACACGGCAAT ATTATCGAAG CCAATGACGA TTTTATCGAA
GCCAGCGGCT TCGAGTGGAA AGACCTCGTA GGGCAACCGC ACAACATATT AAGACACCCC
GATGTTCCCG CCGCCGTATT CAAGGATTTC TGGGACACCT TAAAAGCCGG AAAACCCTGG
TCCCAAATTG TCAAAAACCG ACGAAAGAAC GGCGATCATT ACTGGGTGAA AGCCAATGCA
ACGCCCATTT TTGAAGGCGG TGAAATCAAA GGTTACATGT CTGTCAGAAT ACCAGCCACT
CGAGCAGAAA TCACCGCCGC CGAAAAAGCT TACCAACAAA TCTCTACAGG CAAACTTACT
TTAGAATGCG GATACCCCGT CACTTTAGCT TCTAGGCTTA ATCCATTCAG CCAATTTGAG
TCCAGTCACT TAATTATCTT TTTCAGCATC CTGTTGCTTT TGTCAGCCAA TGCACCGCTT
TTTATAACCA ATATTCCAAT CCTAGTATTT GAAATATTAG ATCTGATGTT TATTTTACTC
ATTCTTGCCA CGTCAGTAAT TACAAATCGA AAACTCCAAA AAACTTACGA GCATCTAACC
TGCATATCAG AGGGACATTT TAATCAACAA ATCAATTCAT CCGGTCGTAA CTTAACCAGT
CGAATTTTAG GCCGTTTAAA GTCAATGCAA ATTCGTCTGG GAGCTGATTT TGAGGATGTT
AAAGCCTCTC TAAACAGTTC AATGCGCATT GAACAAGCAC TGAATTCGGC TTCTTCTAAT
ATCATGGTGG TCGACCGTTT CCGAAATATT ATCTTTATGA ACAAGGCCGT TAAAAAAATG
CTCAAAAAAG TCGAGCCTGA GTTGAAAAAA GACTTACCGA ACTTTGATAC TGACAGCCTA
ATGCGAGAAT CCATTGATGT ATTCCACCAA CATCCAGAGC ATCAAGCCAA CTTACTCGAC
AATCTGAAAG AAACCTATGA GGCACGTATT AAAGTCGGCA ATGCGACCAT TGATCTAATT
GTCGACCCTA TTTTCAGTCA AGATAAAAAA CGGATTGGAA CGGTGGCCGA ATGGAAAAAC
GTCACCGAAC AGCTGGCGAT TGAAGAAAAT ATCAAAAAAA TTGTCTTCAA TGCTTCAGAA
GGTTTACTGG ATGACCGAAT TGAAACCAAA GAACTGGAAG GGTTTAATAA ATCATTATCG
AATTCCATTA ATGAGTTGTT AGATTCCTTC TCTCATTTGA TTCACAACAT CAGTGAGATC
TTGTGCAAAA TGAGTAATGG TGACCTAACC AATCGAATGG ATGGCAATTA TCAAGGTGAA
GTTCATGCCA TGAAGGTTGC CACCAACAGT GCGCTAACGA ATATTGAAGC CACTTTTGGG
CAAATCAAAA CAGGCTCGAA TGAAATTGGC AGCATGGCGG GTGAAGTGTC TCATGCCAGT
GAAGATTTAT CTGAAAGAAC ACAATCACAG GCCGCCTCAC TGGAGCAAAC GGCTTCTTCA
ATGGAACAAA TCACCAGTAC GGTCAAGCAA GCTGCCGAGC ACACCCACCG TGCCAACCAG
CTTTCGAGCG AGGCCACCAA TGAAGCGGAA GAAGCCATTG AAGAAATGAA AGAAACGTCT
GCCGCCATTC ATGGCATCAG TGAGCTGAGC AAACAAATTG CCGACATCAC GTCAGTCATC
GACGGCATTG CCTTCCAAAC TAACCTGTTA GCACTTAATG CCGCTGTAGA AGCGGCCAGA
GCGGGTGAAC ACGGTAAAGG GTTTGCTGTG GTTGCTGGAG AAGTGAGAAA TCTGGCTCAG
AAATCGGCCG ACTCCTCAAA AGAAATCTCC AACCTGATTA CAACCGCCAC ACAACAAATC
AGTCACGGCA CCACGTTAGT TGAAAAAACC AATGCGGCTT TTGCCGATGT GGTCAATAAA
ATCCATGAAG TCAGCACGCT GATTGATCAA CTGTCGACCG GCGCATCAGA ACAAACCAAA
GGCCTTGAAC AGGTGAATAT TGCGGTTTCT TCGCTTGATG AGATGACACA ACAAAATGCC
GCACTGGTTG AACAGCTGGC GGCCACCGCG GGCAATATGA GTGAACAAGC GGAAATGCAA
GCGGATTTCG TAGGTAAATT TAAAATTTCC AGTTCTGCTC AACCCAATGC AATAAGAGGA
GATCAGCAAG CCAGTTTTGA ATTAGAAGAA GCGAAAAACA GCCACCGTGC CTGGACGGTT
CGTCTGGAAC GCTTTTTACT GGGACAAACC GTCGACTTTG ACAAAAACAG TGCGCGCCGA
GATGACGCGT GTCCTCTTGG CAAATGGCTG TATGGGGAAG GGCAAAAATA TGCCCACCTT
TCCGAAATGC AGCAACTGAT TAAAGTCCAT GCTGAAATGC ATCAGACCGT AGGAAAAGTC
GTTGATGCGA AAGAAATGGA AGACCTCGAA TTGGCGAATC AAGAAAAAGA CAACGTCAGC
CGATACTCTC AACAAATTTT AGACTTGATT GATCGTTTAA AAGAAAGCCT TTCCAAGAAC
CCTCAAGCCT CGGCATCTGA ACTGGGACTT GAAAATAAAC CTGCAAAACC AGCCAACAAA
GACCCAGAAG ATTGGAGCGA TTTTTAA
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| Protein sequence | MSKNNGPVTQ KEYPLKEGMT IVSRTDLHGN IIEANDDFIE ASGFEWKDLV GQPHNILRHP
DVPAAVFKDF WDTLKAGKPW SQIVKNRRKN GDHYWVKANA TPIFEGGEIK GYMSVRIPAT
RAEITAAEKA YQQISTGKLT LECGYPVTLA SRLNPFSQFE SSHLIIFFSI LLLLSANAPL
FITNIPILVF EILDLMFILL ILATSVITNR KLQKTYEHLT CISEGHFNQQ INSSGRNLTS
RILGRLKSMQ IRLGADFEDV KASLNSSMRI EQALNSASSN IMVVDRFRNI IFMNKAVKKM
LKKVEPELKK DLPNFDTDSL MRESIDVFHQ HPEHQANLLD NLKETYEARI KVGNATIDLI
VDPIFSQDKK RIGTVAEWKN VTEQLAIEEN IKKIVFNASE GLLDDRIETK ELEGFNKSLS
NSINELLDSF SHLIHNISEI LCKMSNGDLT NRMDGNYQGE VHAMKVATNS ALTNIEATFG
QIKTGSNEIG SMAGEVSHAS EDLSERTQSQ AASLEQTASS MEQITSTVKQ AAEHTHRANQ
LSSEATNEAE EAIEEMKETS AAIHGISELS KQIADITSVI DGIAFQTNLL ALNAAVEAAR
AGEHGKGFAV VAGEVRNLAQ KSADSSKEIS NLITTATQQI SHGTTLVEKT NAAFADVVNK
IHEVSTLIDQ LSTGASEQTK GLEQVNIAVS SLDEMTQQNA ALVEQLAATA GNMSEQAEMQ
ADFVGKFKIS SSAQPNAIRG DQQASFELEE AKNSHRAWTV RLERFLLGQT VDFDKNSARR
DDACPLGKWL YGEGQKYAHL SEMQQLIKVH AEMHQTVGKV VDAKEMEDLE LANQEKDNVS
RYSQQILDLI DRLKESLSKN PQASASELGL ENKPAKPANK DPEDWSDF
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