More than 300 homologs were found in PanDaTox collection
for query gene Lcho_1531 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010524  Lcho_1531  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  100 
 
 
1019 aa  2054    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.301691 
 
 
-
 
NC_010524  Lcho_1530  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  65.65 
 
 
890 aa  863    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.155082 
 
 
-
 
NC_010717  PXO_04751  chemotaxis protein  43.87 
 
 
698 aa  365  3e-99  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_02220  putative chemotaxis transducer  37.15 
 
 
679 aa  362  2e-98  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.329962  normal 
 
 
-
 
NC_010524  Lcho_1532  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.8 
 
 
853 aa  357  5e-97  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.103077 
 
 
-
 
NC_009656  PSPA7_0256  chemotaxis transducer  36.81 
 
 
679 aa  346  1e-93  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0333  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.23 
 
 
720 aa  344  4e-93  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_004578  PSPTO_0912  methyl-accepting chemotaxis protein  60.31 
 
 
551 aa  338  1.9999999999999998e-91  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0902  methyl-accepting chemotaxis sensory transducer  54.99 
 
 
550 aa  334  5e-90  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0785  histidine kinase, HAMP region: chemotaxis sensory transducer  69.76 
 
 
551 aa  328  3e-88  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.367078  normal 
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  37.81 
 
 
860 aa  325  3e-87  Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_010524  Lcho_3799  methyl-accepting chemotaxis sensory transducer  54.76 
 
 
772 aa  322  3e-86  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007298  Daro_1143  histidine kinase, HAMP region: chemotaxis sensory transducer  61.27 
 
 
541 aa  320  6e-86  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1318  methyl-accepting chemotaxis sensory transducer  57.1 
 
 
555 aa  320  7.999999999999999e-86  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  37.66 
 
 
775 aa  317  8e-85  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.49 
 
 
1123 aa  315  2.9999999999999996e-84  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011981  Avi_7320  methyl-accepting chemotaxis protein  37.73 
 
 
774 aa  314  4.999999999999999e-84  Agrobacterium vitis S4  Bacteria  normal  0.364364  n/a   
 
 
-
 
NC_007954  Sden_3297  chemotaxis sensory transducer  57.93 
 
 
543 aa  313  6.999999999999999e-84  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  36.94 
 
 
767 aa  313  9e-84  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0184  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  38.06 
 
 
863 aa  311  2.9999999999999997e-83  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1567  methyl-accepting chemotaxis sensory transducer  58.79 
 
 
547 aa  310  1.0000000000000001e-82  Pseudomonas mendocina ymp  Bacteria  normal  0.0467505  normal 
 
 
-
 
NC_009092  Shew_0111  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.69 
 
 
864 aa  306  1.0000000000000001e-81  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  37.08 
 
 
793 aa  304  5.000000000000001e-81  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_008321  Shewmr4_2091  methyl-accepting chemotaxis sensory transducer  37.89 
 
 
656 aa  303  8.000000000000001e-81  Shewanella sp. MR-4  Bacteria  normal  normal  0.684691 
 
 
-
 
NC_009675  Anae109_3837  methyl-accepting chemotaxis sensory transducer  56.52 
 
 
561 aa  303  9e-81  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.834659 
 
 
-
 
NC_008322  Shewmr7_1883  methyl-accepting chemotaxis sensory transducer  37.89 
 
 
656 aa  303  9e-81  Shewanella sp. MR-7  Bacteria  normal  normal  0.113479 
 
 
-
 
NC_007298  Daro_0729  PAS  37.13 
 
 
945 aa  302  2e-80  Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_007298  Daro_0728  histidine kinase, HAMP region: chemotaxis sensory transducer  35.07 
 
 
792 aa  302  3e-80  Dechloromonas aromatica RCB  Bacteria  normal  0.066629  normal 
 
 
-
 
NC_008577  Shewana3_2216  methyl-accepting chemotaxis sensory transducer  37.68 
 
 
657 aa  300  7e-80  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2100  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.77 
 
 
665 aa  300  8e-80  Shewanella baltica OS223  Bacteria  normal  0.328344  normal 
 
 
-
 
NC_009665  Shew185_2245  methyl-accepting chemotaxis sensory transducer  37.45 
 
 
664 aa  298  3e-79  Shewanella baltica OS185  Bacteria  normal  0.232427  n/a   
 
 
-
 
NC_009997  Sbal195_2362  methyl-accepting chemotaxis sensory transducer  37.25 
 
 
664 aa  298  5e-79  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_2114  methyl-accepting chemotaxis sensory transducer  38.36 
 
 
657 aa  297  7e-79  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2123  methyl-accepting chemotaxis protein  38.92 
 
 
654 aa  296  2e-78  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011891  A2cp1_3844  methyl-accepting chemotaxis sensory transducer  56.66 
 
 
556 aa  295  2e-78  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3761  methyl-accepting chemotaxis sensory transducer  56.12 
 
 
557 aa  295  3e-78  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3897  methyl-accepting chemotaxis sensory transducer  55.59 
 
 
551 aa  292  2e-77  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.198365  n/a   
 
 
-
 
NC_007760  Adeh_1160  methyl-accepting chemotaxis sensory transducer  56.1 
 
 
532 aa  291  3e-77  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3704  methyl-accepting chemotaxis sensory transducer  55.93 
 
 
559 aa  292  3e-77  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.183593  n/a   
 
 
-
 
NC_007912  Sde_3112  putative methyl-accepting chemotaxis sensory transducer  31.85 
 
 
1029 aa  291  4e-77  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_3998  methyl-accepting chemotaxis sensory transducer  56.57 
 
 
550 aa  289  2e-76  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4039  methyl-accepting chemotaxis sensory transducer  56.57 
 
 
551 aa  289  2e-76  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  37.4 
 
 
797 aa  284  6.000000000000001e-75  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  34.58 
 
 
678 aa  278  5e-73  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3993  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.47 
 
 
701 aa  277  8e-73  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.311816 
 
 
-
 
NC_007760  Adeh_2187  methyl-accepting chemotaxis sensory transducer  56.88 
 
 
553 aa  275  3e-72  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3671  methyl-accepting chemotaxis sensory transducer  54.84 
 
 
509 aa  275  3e-72  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.353813  n/a   
 
 
-
 
NC_009675  Anae109_2874  methyl-accepting chemotaxis sensory transducer  55.25 
 
 
563 aa  275  3e-72  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.872696  normal  0.485865 
 
 
-
 
NC_009075  BURPS668_A0206  methyl-accepting chemotaxis protein  36.11 
 
 
793 aa  274  5.000000000000001e-72  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1691  methyl-accepting chemotaxis sensory transducer  55.16 
 
 
553 aa  274  7e-72  Anaeromyxobacter sp. K  Bacteria  normal  0.302444  n/a   
 
 
-
 
NC_011891  A2cp1_1762  methyl-accepting chemotaxis sensory transducer  55.16 
 
 
553 aa  273  1e-71  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2542  methyl-accepting chemotaxis sensory transducer  46.65 
 
 
597 aa  272  2.9999999999999997e-71  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011769  DvMF_1209  methyl-accepting chemotaxis sensory transducer  52.44 
 
 
659 aa  271  4e-71  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.261932 
 
 
-
 
NC_004347  SO_2323  methyl-accepting chemotaxis protein  50.77 
 
 
646 aa  271  5e-71  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011891  A2cp1_2573  methyl-accepting chemotaxis sensory transducer  59.27 
 
 
621 aa  270  1e-70  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.650368  n/a   
 
 
-
 
NC_011891  A2cp1_1322  methyl-accepting chemotaxis sensory transducer  55.9 
 
 
538 aa  270  1e-70  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2477  methyl-accepting chemotaxis sensory transducer  59.27 
 
 
617 aa  270  1e-70  Anaeromyxobacter sp. K  Bacteria  normal  0.200364  n/a   
 
 
-
 
NC_011145  AnaeK_3602  methyl-accepting chemotaxis sensory transducer  56.92 
 
 
509 aa  270  1e-70  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2772  methyl-accepting chemotaxis sensory transducer  43.38 
 
 
735 aa  270  1e-70  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1482  methyl-accepting chemotaxis sensory transducer  43.38 
 
 
735 aa  269  2e-70  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0158  chemotaxis protein  35.67 
 
 
779 aa  269  2e-70  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1608  methyl-accepting chemotaxis sensory transducer  48.91 
 
 
558 aa  268  5e-70  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1380  methyl-accepting chemotaxis sensory transducer  58.87 
 
 
608 aa  267  5.999999999999999e-70  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.236828  n/a   
 
 
-
 
NC_011769  DvMF_0621  methyl-accepting chemotaxis sensory transducer  50.87 
 
 
727 aa  267  8e-70  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0173671 
 
 
-
 
NC_013173  Dbac_2647  methyl-accepting chemotaxis sensory transducer  48.84 
 
 
554 aa  266  1e-69  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.910941  n/a   
 
 
-
 
NC_011145  AnaeK_1220  methyl-accepting chemotaxis sensory transducer  55.56 
 
 
538 aa  266  1e-69  Anaeromyxobacter sp. K  Bacteria  normal  0.307637  n/a   
 
 
-
 
NC_008751  Dvul_2361  methyl-accepting chemotaxis sensory transducer  54.01 
 
 
652 aa  266  1e-69  Desulfovibrio vulgaris DP4  Bacteria  normal  0.128072  normal  0.188082 
 
 
-
 
NC_007760  Adeh_3513  methyl-accepting chemotaxis sensory transducer  55.71 
 
 
509 aa  266  2e-69  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.150611  n/a   
 
 
-
 
NC_010814  Glov_1735  methyl-accepting chemotaxis sensory transducer  42.21 
 
 
868 aa  265  2e-69  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1601  methyl-accepting chemotaxis sensory transducer  42.37 
 
 
1500 aa  265  3e-69  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1917  methyl-accepting chemotaxis sensory transducer  52.75 
 
 
677 aa  264  6.999999999999999e-69  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.134066  n/a   
 
 
-
 
NC_007517  Gmet_2422  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.48 
 
 
1046 aa  263  8.999999999999999e-69  Geobacter metallireducens GS-15  Bacteria  normal  0.925436  normal 
 
 
-
 
NC_010814  Glov_1733  methyl-accepting chemotaxis sensory transducer  44.48 
 
 
823 aa  263  2e-68  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1421  methyl-accepting chemotaxis sensory transducer  52.01 
 
 
676 aa  262  2e-68  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.45919  n/a   
 
 
-
 
NC_008609  Ppro_2710  methyl-accepting chemotaxis sensory transducer  45.62 
 
 
969 aa  262  2e-68  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1077  methyl-accepting chemotaxis sensory transducer  48.15 
 
 
690 aa  261  4e-68  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.317064  n/a   
 
 
-
 
NC_011146  Gbem_2944  methyl-accepting chemotaxis sensory transducer  45.95 
 
 
780 aa  261  7e-68  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1294  methyl-accepting chemotaxis protein  44.39 
 
 
962 aa  260  9e-68  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1294  methyl-accepting chemotaxis sensory transducer  42.78 
 
 
686 aa  258  5e-67  Geobacter sp. M21  Bacteria  n/a    hitchhiker  4.66893e-19 
 
 
-
 
NC_002939  GSU1140  methyl-accepting chemotaxis protein  44.36 
 
 
727 aa  257  8e-67  Geobacter sulfurreducens PCA  Bacteria  normal  0.664897  n/a   
 
 
-
 
NC_010510  Mrad2831_5777  methyl-accepting chemotaxis sensory transducer  49.49 
 
 
705 aa  257  1.0000000000000001e-66  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.807181  normal  0.137814 
 
 
-
 
NC_009483  Gura_2779  methyl-accepting chemotaxis sensory transducer  50.49 
 
 
566 aa  256  1.0000000000000001e-66  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2942  methyl-accepting chemotaxis sensory transducer  32.37 
 
 
1049 aa  255  3e-66  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1304  methyl-accepting chemotaxis protein  51.92 
 
 
566 aa  255  3e-66  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1303  methyl-accepting chemotaxis protein  50.69 
 
 
494 aa  254  4.0000000000000004e-66  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1280  methyl-accepting chemotaxis sensory transducer  33.28 
 
 
1048 aa  254  8.000000000000001e-66  Geobacter sp. M21  Bacteria  n/a    normal  0.0818053 
 
 
-
 
NC_008751  Dvul_1207  methyl-accepting chemotaxis sensory transducer  49.32 
 
 
720 aa  254  8.000000000000001e-66  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.149931 
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  39.12 
 
 
752 aa  253  1e-65  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_007520  Tcr_0553  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30.04 
 
 
888 aa  252  2e-65  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2985  methyl-accepting chemotaxis sensory transducer  51.46 
 
 
576 aa  252  2e-65  Geobacter uraniireducens Rf4  Bacteria  normal  0.293775  n/a   
 
 
-
 
NC_012918  GM21_1108  methyl-accepting chemotaxis sensory transducer  47.34 
 
 
685 aa  251  4e-65  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_2945  methyl-accepting chemotaxis sensory transducer  46.86 
 
 
780 aa  251  6e-65  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2401  methyl-accepting chemotaxis sensory transducer  47.8 
 
 
528 aa  250  1e-64  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  34.86 
 
 
610 aa  248  3e-64  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_2401  methyl-accepting chemotaxis sensory transducer  54.94 
 
 
674 aa  248  4e-64  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.0000495749  normal  0.0928318 
 
 
-
 
NC_009483  Gura_1191  methyl-accepting chemotaxis sensory transducer  32.26 
 
 
846 aa  248  6e-64  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1105  methyl-accepting chemotaxis sensory transducer  49.68 
 
 
563 aa  246  9.999999999999999e-64  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008576  Mmc1_3308  methyl-accepting chemotaxis sensory transducer  50 
 
 
682 aa  247  9.999999999999999e-64  Magnetococcus sp. MC-1  Bacteria  normal  0.785168  normal 
 
 
-
 
NC_011989  Avi_3947  methyl-accepting chemotaxis protein  44.85 
 
 
619 aa  246  1.9999999999999999e-63  Agrobacterium vitis S4  Bacteria  normal  0.412994  n/a   
 
 
-
 
NC_010505  Mrad2831_4817  methyl-accepting chemotaxis sensory transducer  56.33 
 
 
747 aa  244  7.999999999999999e-63  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.00849638 
 
 
-
 
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