Gene Avi_7320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_7320 
Symbol 
ID7380536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011981 
Strand
Start bp295759 
End bp298083 
Gene Length2325 bp 
Protein Length774 aa 
Translation table11 
GC content54% 
IMG OID643641399 
Productmethyl-accepting chemotaxis protein 
Protein accessionYP_002539696 
Protein GI222102657 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.364364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTCT ACACTCAAAT GAAGAAATCT TCCAAATCTC AGGCGGCTGT GGCTGAGATA 
CAGCGCGTCA AAGTTAGTAT CGCAGACGGA AAACTAGCCG CGCGTGCAAA TCTCGATGCA
GTCACCGGTG AAGCCAGAGA GATGCTGATT GCTGTCAACG AGTTACTTGA GGCCAGTATG
CAGCCGATGC AGAAGCTCGG GGCATCTATC GCTGACATGT CAGGTGAGCA CGACAAGGGC
GACATTGATG TCAGGTTACC TTCAGAGGAC TTCAAGGGCG ACTTCGCTGT CATGGCCAAA
GGCGTTAACG ACATGGTCGG CGGCCATATC GCCGTCAAGA AAAAGGCCAT GGCTTGCGTC
AAGGAACTTG GGTTGGGCAA TTTTGAAGCA CCGCTCGAGC AGTTTCCCGG CAAGAAAGCT
TTCATCAACG AGACAATCGA AACCTTGCGT ACCAATCTCA AAGGCCTGAT TTCTGAGATG
AATACGATGT CGCTTGAGCA CGATAAGGGC GACATTGAGG TCTTCGTGCC GGTTGAAAAA
TTCAAGGGTG ACTTTGCCGT GATGGCCAAA GGCGTCAACG ATATGGTCGC GGGCCACATT
GCAGTTAAAA AGAAGGCCAT GGCCTGCATC AAGGCGCTAG GTGAGGGCAA TTTCGAAGCG
TCGCTCGAGC AGTTCCCCGG CAAAAAAGCC TTCATCAATG AGACGATCGA AACCTTGCGC
GCAAATCTGA AGGGTTTGAT TTTTGAAATG AATACGATGT CGATCGAGCA CGATAAAGGC
GACATTGACA TCTTCGTGCC GGTTGAGAAA TTCAAGGGCG ATTTTGCCGT GATGGCCAAG
GGCGTCAACG ATATGGTTAG CAGCCACATC GCCGTCAAAA AGAAGGCCAT GGCCTGCATC
AAGGCGCTGG GTGAGGGCAA TTTTGAAGCG CCGCTCGAGC AGTTCCCCGG CAAGAAAGCT
TTCATCAATG AGACTATCGA GACGCTGCGT GGAAATTTAC GGGCGATTAC CACTGAACTT
CAGCGCTTGA TTGCCGCGTC TACAGCCGGC AAGCTCTCCG AGCGGGGCGC GGCCGATCAT
TTCGTCGGGG ATTTCGCCAA GCTGGTCTCT GGAATCAACG GCATGTTGGA CGCTATCATT
CTTCCGATCT CTGAGGGCAA TCGCGTTCTT CGCCAGGTGA GTTTCGGTGA TCTTACCCAA
CATGTGGACA TCGAATGCGA AGGCGATCAT GCGAGCATGA AGAATGCGAT CAACAATATG
GTAGACAACC TGCGCAACAC AGCAACCATA GCTGACCTGA TTGCCAGTGG CGACTTAACC
GTCGAGCCGG AGCCGCTTTC AGACAAGGAC ACACTGGGAA TTGCATTGGT GTCTATGGTC
GAGCGCCTTC GTGGGGTTGT TGCCGATGCA TTAGCCGCAA GTCAAAATGT CTCAGCGGGT
TCACAGCAGC TCTCCGCCGG CTCAGAGCAG CTTTCGCAAG GTGCGACCGA ACAGGCTGCG
GCGGCTGAAG AAGCCTCTGC ATCAATGGAA GAAATGGCCG CCAATATCAA GCAGAACGCT
GACAACGCTG CCCAGACCGA AAAGATCGCC CGCCAATCAT CGAAGGATGC CGAAGCTTCC
GGCGAGGCCG TCAACCGGGC GGTTACCGCG ATGCGAACGA TTGCCGAAAA AATTTCCATA
GTGCAGGAAA TCGCTCGTCA GACCGACCTT CTTGCTCTGA ACGCAGCCGT GGAAGCAGCC
CGTGCTGGAG AACATGGCAA GGGCTTTGCC GTTGTTGCCT CTGAAGTGCG AAAGCTTGCC
GAACGCAGCC AGTCAGCCGC CGCCGAAATC AGCGGTCTGT CTGGACAGAC TGTGCAGGTT
GCCACCGAAG CTGGTGGAAT GCTGGCGCGT CTGGTTCCCG ACATCCGCAA GACTGCCGAA
TTGGTCTCAG AAATCTCTGC GGCTTGCCGT GAGCAGGATA TCGGTGCTTC GCAGATCAAC
GAGGCAATCC AGCAACTCGA CAAGGTGACA CAGCAGAATG CCGGAGCCTC GGAAGAAATG
TCGGCAACCT CTGAAGAACT CGCAGCCCAA GCCGAGGAGC TTCAAGCCTC CATCGCCTTC
TTTAAGGTCG ACATTGCTGG TGACGTTAAA ATGCAAGCGT CGCGCAACCA GTCGACCAAG
GCTCGGCCAA AGAGCAATAT CTCAACAAAA CCGGCCGCCA TGGCCCATAT GTCCAAACCC
GGCCACTCCG TTGCAGGTCA GCAGGCCCGC GTAAAAGGCT GGGTGCTCGA TATGTCGATG
GGTGGCCCTG ATGCTGAGGA TTCCGATTTT CAAGAAAGGG CATAA
 
Protein sequence
MSFYTQMKKS SKSQAAVAEI QRVKVSIADG KLAARANLDA VTGEAREMLI AVNELLEASM 
QPMQKLGASI ADMSGEHDKG DIDVRLPSED FKGDFAVMAK GVNDMVGGHI AVKKKAMACV
KELGLGNFEA PLEQFPGKKA FINETIETLR TNLKGLISEM NTMSLEHDKG DIEVFVPVEK
FKGDFAVMAK GVNDMVAGHI AVKKKAMACI KALGEGNFEA SLEQFPGKKA FINETIETLR
ANLKGLIFEM NTMSIEHDKG DIDIFVPVEK FKGDFAVMAK GVNDMVSSHI AVKKKAMACI
KALGEGNFEA PLEQFPGKKA FINETIETLR GNLRAITTEL QRLIAASTAG KLSERGAADH
FVGDFAKLVS GINGMLDAII LPISEGNRVL RQVSFGDLTQ HVDIECEGDH ASMKNAINNM
VDNLRNTATI ADLIASGDLT VEPEPLSDKD TLGIALVSMV ERLRGVVADA LAASQNVSAG
SQQLSAGSEQ LSQGATEQAA AAEEASASME EMAANIKQNA DNAAQTEKIA RQSSKDAEAS
GEAVNRAVTA MRTIAEKISI VQEIARQTDL LALNAAVEAA RAGEHGKGFA VVASEVRKLA
ERSQSAAAEI SGLSGQTVQV ATEAGGMLAR LVPDIRKTAE LVSEISAACR EQDIGASQIN
EAIQQLDKVT QQNAGASEEM SATSEELAAQ AEELQASIAF FKVDIAGDVK MQASRNQSTK
ARPKSNISTK PAAMAHMSKP GHSVAGQQAR VKGWVLDMSM GGPDAEDSDF QERA