Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7320 |
Symbol | |
ID | 7380536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | + |
Start bp | 295759 |
End bp | 298083 |
Gene Length | 2325 bp |
Protein Length | 774 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643641399 |
Product | methyl-accepting chemotaxis protein |
Protein accession | YP_002539696 |
Protein GI | 222102657 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.364364 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTTCT ACACTCAAAT GAAGAAATCT TCCAAATCTC AGGCGGCTGT GGCTGAGATA CAGCGCGTCA AAGTTAGTAT CGCAGACGGA AAACTAGCCG CGCGTGCAAA TCTCGATGCA GTCACCGGTG AAGCCAGAGA GATGCTGATT GCTGTCAACG AGTTACTTGA GGCCAGTATG CAGCCGATGC AGAAGCTCGG GGCATCTATC GCTGACATGT CAGGTGAGCA CGACAAGGGC GACATTGATG TCAGGTTACC TTCAGAGGAC TTCAAGGGCG ACTTCGCTGT CATGGCCAAA GGCGTTAACG ACATGGTCGG CGGCCATATC GCCGTCAAGA AAAAGGCCAT GGCTTGCGTC AAGGAACTTG GGTTGGGCAA TTTTGAAGCA CCGCTCGAGC AGTTTCCCGG CAAGAAAGCT TTCATCAACG AGACAATCGA AACCTTGCGT ACCAATCTCA AAGGCCTGAT TTCTGAGATG AATACGATGT CGCTTGAGCA CGATAAGGGC GACATTGAGG TCTTCGTGCC GGTTGAAAAA TTCAAGGGTG ACTTTGCCGT GATGGCCAAA GGCGTCAACG ATATGGTCGC GGGCCACATT GCAGTTAAAA AGAAGGCCAT GGCCTGCATC AAGGCGCTAG GTGAGGGCAA TTTCGAAGCG TCGCTCGAGC AGTTCCCCGG CAAAAAAGCC TTCATCAATG AGACGATCGA AACCTTGCGC GCAAATCTGA AGGGTTTGAT TTTTGAAATG AATACGATGT CGATCGAGCA CGATAAAGGC GACATTGACA TCTTCGTGCC GGTTGAGAAA TTCAAGGGCG ATTTTGCCGT GATGGCCAAG GGCGTCAACG ATATGGTTAG CAGCCACATC GCCGTCAAAA AGAAGGCCAT GGCCTGCATC AAGGCGCTGG GTGAGGGCAA TTTTGAAGCG CCGCTCGAGC AGTTCCCCGG CAAGAAAGCT TTCATCAATG AGACTATCGA GACGCTGCGT GGAAATTTAC GGGCGATTAC CACTGAACTT CAGCGCTTGA TTGCCGCGTC TACAGCCGGC AAGCTCTCCG AGCGGGGCGC GGCCGATCAT TTCGTCGGGG ATTTCGCCAA GCTGGTCTCT GGAATCAACG GCATGTTGGA CGCTATCATT CTTCCGATCT CTGAGGGCAA TCGCGTTCTT CGCCAGGTGA GTTTCGGTGA TCTTACCCAA CATGTGGACA TCGAATGCGA AGGCGATCAT GCGAGCATGA AGAATGCGAT CAACAATATG GTAGACAACC TGCGCAACAC AGCAACCATA GCTGACCTGA TTGCCAGTGG CGACTTAACC GTCGAGCCGG AGCCGCTTTC AGACAAGGAC ACACTGGGAA TTGCATTGGT GTCTATGGTC GAGCGCCTTC GTGGGGTTGT TGCCGATGCA TTAGCCGCAA GTCAAAATGT CTCAGCGGGT TCACAGCAGC TCTCCGCCGG CTCAGAGCAG CTTTCGCAAG GTGCGACCGA ACAGGCTGCG GCGGCTGAAG AAGCCTCTGC ATCAATGGAA GAAATGGCCG CCAATATCAA GCAGAACGCT GACAACGCTG CCCAGACCGA AAAGATCGCC CGCCAATCAT CGAAGGATGC CGAAGCTTCC GGCGAGGCCG TCAACCGGGC GGTTACCGCG ATGCGAACGA TTGCCGAAAA AATTTCCATA GTGCAGGAAA TCGCTCGTCA GACCGACCTT CTTGCTCTGA ACGCAGCCGT GGAAGCAGCC CGTGCTGGAG AACATGGCAA GGGCTTTGCC GTTGTTGCCT CTGAAGTGCG AAAGCTTGCC GAACGCAGCC AGTCAGCCGC CGCCGAAATC AGCGGTCTGT CTGGACAGAC TGTGCAGGTT GCCACCGAAG CTGGTGGAAT GCTGGCGCGT CTGGTTCCCG ACATCCGCAA GACTGCCGAA TTGGTCTCAG AAATCTCTGC GGCTTGCCGT GAGCAGGATA TCGGTGCTTC GCAGATCAAC GAGGCAATCC AGCAACTCGA CAAGGTGACA CAGCAGAATG CCGGAGCCTC GGAAGAAATG TCGGCAACCT CTGAAGAACT CGCAGCCCAA GCCGAGGAGC TTCAAGCCTC CATCGCCTTC TTTAAGGTCG ACATTGCTGG TGACGTTAAA ATGCAAGCGT CGCGCAACCA GTCGACCAAG GCTCGGCCAA AGAGCAATAT CTCAACAAAA CCGGCCGCCA TGGCCCATAT GTCCAAACCC GGCCACTCCG TTGCAGGTCA GCAGGCCCGC GTAAAAGGCT GGGTGCTCGA TATGTCGATG GGTGGCCCTG ATGCTGAGGA TTCCGATTTT CAAGAAAGGG CATAA
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Protein sequence | MSFYTQMKKS SKSQAAVAEI QRVKVSIADG KLAARANLDA VTGEAREMLI AVNELLEASM QPMQKLGASI ADMSGEHDKG DIDVRLPSED FKGDFAVMAK GVNDMVGGHI AVKKKAMACV KELGLGNFEA PLEQFPGKKA FINETIETLR TNLKGLISEM NTMSLEHDKG DIEVFVPVEK FKGDFAVMAK GVNDMVAGHI AVKKKAMACI KALGEGNFEA SLEQFPGKKA FINETIETLR ANLKGLIFEM NTMSIEHDKG DIDIFVPVEK FKGDFAVMAK GVNDMVSSHI AVKKKAMACI KALGEGNFEA PLEQFPGKKA FINETIETLR GNLRAITTEL QRLIAASTAG KLSERGAADH FVGDFAKLVS GINGMLDAII LPISEGNRVL RQVSFGDLTQ HVDIECEGDH ASMKNAINNM VDNLRNTATI ADLIASGDLT VEPEPLSDKD TLGIALVSMV ERLRGVVADA LAASQNVSAG SQQLSAGSEQ LSQGATEQAA AAEEASASME EMAANIKQNA DNAAQTEKIA RQSSKDAEAS GEAVNRAVTA MRTIAEKISI VQEIARQTDL LALNAAVEAA RAGEHGKGFA VVASEVRKLA ERSQSAAAEI SGLSGQTVQV ATEAGGMLAR LVPDIRKTAE LVSEISAACR EQDIGASQIN EAIQQLDKVT QQNAGASEEM SATSEELAAQ AEELQASIAF FKVDIAGDVK MQASRNQSTK ARPKSNISTK PAAMAHMSKP GHSVAGQQAR VKGWVLDMSM GGPDAEDSDF QERA
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