Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1883 |
Symbol | |
ID | 4256842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2221528 |
End bp | 2223498 |
Gene Length | 1971 bp |
Protein Length | 656 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638122538 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_737929 |
Protein GI | 114047379 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.113479 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTATTT TCAATGTGTT TGGAAATGAA GAGGCGCGCC AGCAAAAGGA AGAGGAGCTG CAACGCTATT TCCAATTATT AGATAACAGC GGCAACAGCT TTATGATCGC CGACAGCAAC CGCAATATTA TCTACGCCAA TAAAGCGGTA TTGAATATGT TATCCGAGGC TGAGGCTGAC ATTCGCAAAG AGCTGCCGCA GTTCTCTGTG GCCAAGGTGG TGGGCAGTAA TATCGATATT TTCCATAAAA ACCCGGCCCA TCAACGCAAT ATGCTCGAGC GCCTAACCCA ATCCCATACG GCGCAAATCA CCATTGGGAA ACGGACTTTT AAGCTGATCC TGACGCCCAT TATCACCCGT GAAAATAAAC ACTTAGGTAC GGGGGTTGAG TGGATTGATA GAACTGAGAG CATAGAGTCC GAGCGGGCGA CGCAGCGCAT TTTAGAGGCG CTGAATAATA CCAGTACCAA TGTGATGATC GCTGATGCCA ACCGCACTAT CATTTATATG AACCGTTCTG TGGAGTCGAT GCTGCGCCAA TCTGAGAGTG AGATCAGGCA AGCGCTGCCG CATTTCTCCG TCGATAAAAT TCTTGGCAGC TCGATGGATA TTTTCCATAA GAATCCAGCC CATCAAGCGA GTCTGTTAGA CAAGCTCGAC CGTAAATATG AATCGCAAAT CAAAGTGGCC AGTTGTCACT TCCGCTTAAC CGCAAGCCCG ATTATTTCCA AAACAGGCGA GCGGTTAGGT TCTGTTGTCG AATGGCTCGA CCGCACGGTC GAAGTGCAAA TCGAGCAGGA AATCTCGCGC ATCGTCAATG CGGCGGCGGC GGGGGATTTC TCCCAACGGG CTGAGACGCA AGGTAAGCAG GGCTTCTTCT TAATGCTGGC GAACAGCCTC AATGCCTTGA TTGAAACCTC GGATCGCGGT CTACAGGATG TGGCGCGGGT GTTGATGGCG CTCGCCGAAG GCGATTTAAC CACGCGTATC TATAACGATT ACGAAGGCAC CTTTAATGAT TTGAAAAACT ATTCAAATCA AACCGCTGAA AAGCTCTCTT ACATGATAAG AGACATTCAA AAAGCCGCCG ATACCATCAA TACCGCCTCT TCAGAAATCG CTCAGGGCAA TGCTGATTTG TCGAGTCGCA CTGAGGAGCA AGCATCGAGT CTTGAACAAA CCTCGGCGAG TATGGAAGAA CTGACGGGCA CGGTGAAGCT AAATGCCGAC AACGCCAGCC AGGCCAATGC ACTTGCCTCT AAGGCAGCCG ATGTCGCCGT CGATGGGGGC GAACTTATTC AGCAAGTGGT GCAAACCATG GCATCGATTA ACGAATCGGC ACGTAAGATT GCCGATATTA TCGGTGTTAT TGATGGCATA GCCTTCCAAA CCAATATCTT AGCGCTAAAT GCGGCGGTCG AAGCGGCCAG AGCCGGTGAG CAAGGTCGTG GATTTGCGGT GGTGGCCTCA GAGGTGAGAA GTTTGGCCCA ACGTTCGGCC AACGCAGCCA AAGACATTAA AGCCTTGATC TCCGACTCGG TGACCAAAAT CGAAAGCGGT AACAGCTTAG TCGGCAAATC CGGCGACACC ATGAAAGAAA TCGTCATCGC TATTAAGCGG GTGAACGACA TCATGGCCGA AATTGCCTCA GCCTCGAATG AGCAGGCGAT CGGTATCGAT GAGATCAGTA AAGCCGTGGT GCAAATGGAT GAAATGACGC AGCAAAACGC GGCCTTAGTG GAAGAGGCTG CCGCCGCAGC CGAAAGCATG CAATCGCAGG CGCAGCAGTT AGCGGACAGT GTGGCCAACT TCACCGTGGA CGAAGACACC ACAGCTGCGC CAAAACCCGT GGCGAGTCAC AAGAAGTTAG CGGTTAAACC GCCATCGACT GTGACTCGCA TGCCCGTTAA ACCTAAGGCT ATGGCGCCAA AGGTCAATAA AGCCGACCAA GATGAATGGG AAGATTTTTG A
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Protein sequence | MGIFNVFGNE EARQQKEEEL QRYFQLLDNS GNSFMIADSN RNIIYANKAV LNMLSEAEAD IRKELPQFSV AKVVGSNIDI FHKNPAHQRN MLERLTQSHT AQITIGKRTF KLILTPIITR ENKHLGTGVE WIDRTESIES ERATQRILEA LNNTSTNVMI ADANRTIIYM NRSVESMLRQ SESEIRQALP HFSVDKILGS SMDIFHKNPA HQASLLDKLD RKYESQIKVA SCHFRLTASP IISKTGERLG SVVEWLDRTV EVQIEQEISR IVNAAAAGDF SQRAETQGKQ GFFLMLANSL NALIETSDRG LQDVARVLMA LAEGDLTTRI YNDYEGTFND LKNYSNQTAE KLSYMIRDIQ KAADTINTAS SEIAQGNADL SSRTEEQASS LEQTSASMEE LTGTVKLNAD NASQANALAS KAADVAVDGG ELIQQVVQTM ASINESARKI ADIIGVIDGI AFQTNILALN AAVEAARAGE QGRGFAVVAS EVRSLAQRSA NAAKDIKALI SDSVTKIESG NSLVGKSGDT MKEIVIAIKR VNDIMAEIAS ASNEQAIGID EISKAVVQMD EMTQQNAALV EEAAAAAESM QSQAQQLADS VANFTVDEDT TAAPKPVASH KKLAVKPPST VTRMPVKPKA MAPKVNKADQ DEWEDF
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