| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1883 |
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| Symbol | |
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| ID | 4256842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2221528 |
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| End bp | 2223498 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638122538 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_737929 |
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| Protein GI | 114047379 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.113479 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTATTT TCAATGTGTT TGGAAATGAA GAGGCGCGCC AGCAAAAGGA AGAGGAGCTG
CAACGCTATT TCCAATTATT AGATAACAGC GGCAACAGCT TTATGATCGC CGACAGCAAC
CGCAATATTA TCTACGCCAA TAAAGCGGTA TTGAATATGT TATCCGAGGC TGAGGCTGAC
ATTCGCAAAG AGCTGCCGCA GTTCTCTGTG GCCAAGGTGG TGGGCAGTAA TATCGATATT
TTCCATAAAA ACCCGGCCCA TCAACGCAAT ATGCTCGAGC GCCTAACCCA ATCCCATACG
GCGCAAATCA CCATTGGGAA ACGGACTTTT AAGCTGATCC TGACGCCCAT TATCACCCGT
GAAAATAAAC ACTTAGGTAC GGGGGTTGAG TGGATTGATA GAACTGAGAG CATAGAGTCC
GAGCGGGCGA CGCAGCGCAT TTTAGAGGCG CTGAATAATA CCAGTACCAA TGTGATGATC
GCTGATGCCA ACCGCACTAT CATTTATATG AACCGTTCTG TGGAGTCGAT GCTGCGCCAA
TCTGAGAGTG AGATCAGGCA AGCGCTGCCG CATTTCTCCG TCGATAAAAT TCTTGGCAGC
TCGATGGATA TTTTCCATAA GAATCCAGCC CATCAAGCGA GTCTGTTAGA CAAGCTCGAC
CGTAAATATG AATCGCAAAT CAAAGTGGCC AGTTGTCACT TCCGCTTAAC CGCAAGCCCG
ATTATTTCCA AAACAGGCGA GCGGTTAGGT TCTGTTGTCG AATGGCTCGA CCGCACGGTC
GAAGTGCAAA TCGAGCAGGA AATCTCGCGC ATCGTCAATG CGGCGGCGGC GGGGGATTTC
TCCCAACGGG CTGAGACGCA AGGTAAGCAG GGCTTCTTCT TAATGCTGGC GAACAGCCTC
AATGCCTTGA TTGAAACCTC GGATCGCGGT CTACAGGATG TGGCGCGGGT GTTGATGGCG
CTCGCCGAAG GCGATTTAAC CACGCGTATC TATAACGATT ACGAAGGCAC CTTTAATGAT
TTGAAAAACT ATTCAAATCA AACCGCTGAA AAGCTCTCTT ACATGATAAG AGACATTCAA
AAAGCCGCCG ATACCATCAA TACCGCCTCT TCAGAAATCG CTCAGGGCAA TGCTGATTTG
TCGAGTCGCA CTGAGGAGCA AGCATCGAGT CTTGAACAAA CCTCGGCGAG TATGGAAGAA
CTGACGGGCA CGGTGAAGCT AAATGCCGAC AACGCCAGCC AGGCCAATGC ACTTGCCTCT
AAGGCAGCCG ATGTCGCCGT CGATGGGGGC GAACTTATTC AGCAAGTGGT GCAAACCATG
GCATCGATTA ACGAATCGGC ACGTAAGATT GCCGATATTA TCGGTGTTAT TGATGGCATA
GCCTTCCAAA CCAATATCTT AGCGCTAAAT GCGGCGGTCG AAGCGGCCAG AGCCGGTGAG
CAAGGTCGTG GATTTGCGGT GGTGGCCTCA GAGGTGAGAA GTTTGGCCCA ACGTTCGGCC
AACGCAGCCA AAGACATTAA AGCCTTGATC TCCGACTCGG TGACCAAAAT CGAAAGCGGT
AACAGCTTAG TCGGCAAATC CGGCGACACC ATGAAAGAAA TCGTCATCGC TATTAAGCGG
GTGAACGACA TCATGGCCGA AATTGCCTCA GCCTCGAATG AGCAGGCGAT CGGTATCGAT
GAGATCAGTA AAGCCGTGGT GCAAATGGAT GAAATGACGC AGCAAAACGC GGCCTTAGTG
GAAGAGGCTG CCGCCGCAGC CGAAAGCATG CAATCGCAGG CGCAGCAGTT AGCGGACAGT
GTGGCCAACT TCACCGTGGA CGAAGACACC ACAGCTGCGC CAAAACCCGT GGCGAGTCAC
AAGAAGTTAG CGGTTAAACC GCCATCGACT GTGACTCGCA TGCCCGTTAA ACCTAAGGCT
ATGGCGCCAA AGGTCAATAA AGCCGACCAA GATGAATGGG AAGATTTTTG A
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| Protein sequence | MGIFNVFGNE EARQQKEEEL QRYFQLLDNS GNSFMIADSN RNIIYANKAV LNMLSEAEAD
IRKELPQFSV AKVVGSNIDI FHKNPAHQRN MLERLTQSHT AQITIGKRTF KLILTPIITR
ENKHLGTGVE WIDRTESIES ERATQRILEA LNNTSTNVMI ADANRTIIYM NRSVESMLRQ
SESEIRQALP HFSVDKILGS SMDIFHKNPA HQASLLDKLD RKYESQIKVA SCHFRLTASP
IISKTGERLG SVVEWLDRTV EVQIEQEISR IVNAAAAGDF SQRAETQGKQ GFFLMLANSL
NALIETSDRG LQDVARVLMA LAEGDLTTRI YNDYEGTFND LKNYSNQTAE KLSYMIRDIQ
KAADTINTAS SEIAQGNADL SSRTEEQASS LEQTSASMEE LTGTVKLNAD NASQANALAS
KAADVAVDGG ELIQQVVQTM ASINESARKI ADIIGVIDGI AFQTNILALN AAVEAARAGE
QGRGFAVVAS EVRSLAQRSA NAAKDIKALI SDSVTKIESG NSLVGKSGDT MKEIVIAIKR
VNDIMAEIAS ASNEQAIGID EISKAVVQMD EMTQQNAALV EEAAAAAESM QSQAQQLADS
VANFTVDEDT TAAPKPVASH KKLAVKPPST VTRMPVKPKA MAPKVNKADQ DEWEDF
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