Gene Bphyt_0231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0231 
Symbol 
ID6282276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp247625 
End bp248599 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content63% 
IMG OID642619796 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001893885 
Protein GI187922243 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTCGC TCGGCGCAAT GAAAGACCAG TTGACGAGCA TCGTGGAGGG CATCAAGGCT 
TCCAGTGAGT CGATCTCCGT CGCTGCCGGC CAGATTGCGC AAGGCAATAC TGACTTGTCC
CAGCGCACCG AAGAGCAGGC GGCGTCACTC GAGGAAACAG CGTCGAGCAT GGAAGAGCTG
ACCAGCACAG TCCGTCAGAA TGCGGACAAT GCCAGGCAGG CCACTACACT GGCCGTCACC
GCGTCGACCA TCGCGCAGCG CGGCGGGGAG GTGGTCGGCC GCGTGGTGGA GACGATGAAC
GGGATCTCCG ACAGTTCCGC CAAAGTCGCC GATATCATTG GCGTGATCGA AGGCATCGCA
TTCCAGACGA ATATCCTCGC GCTTAACGCA GCAGTCGAGG CAGCTCGCGC TGGCGAACAG
GGGCGAGGGT TTGCCGTCGT GGCCGGCGAG GTACGCACGC TTGCCCAGCG CAGTGCAGCA
GCAGCCAGGG AAATCAAGGA TCTGATCGGC GAGTCGGTGA CTCGCGTCGA TACCGGCTCG
AAACTCGTTG AGGAAGCCGG GAGCACCATC AACGAAATCG TCCAGGCGGT GAAGCGCGTG
ACCGACATCA TGAGCGAAAT CGCGGCGGCT TCGGAAGAAC AGAGCGCCGG TATCGGGCAG
GTTAATACGG CGGTTACCCA GATGGACGAG GTGACCCAGC AGAATGCCGC CCTGGTCGAA
GAAGCGTCGG CAGCAGCGCA GTCGATGGCC CAGCAGGCCC AGGCGCTACG TCAGGCGGTG
GCCGTCTTCA GGATCGCCGA TACGCGGCCA GCCGGGTCAC GCATAGTCGC CCCAGCGAGT
GATCCGCGTC TGTCGTCGCA GACCGTTCGC ATGCCTTCCC CTGCAACGTC AACCAGGACG
ACGCCATTCG CGACCGCCGG CGGAGACACC ATGATCGCGA CGACCTCCCG TGCCGTGGAT
TGGCAGGAAT TCTGA
 
Protein sequence
MHSLGAMKDQ LTSIVEGIKA SSESISVAAG QIAQGNTDLS QRTEEQAASL EETASSMEEL 
TSTVRQNADN ARQATTLAVT ASTIAQRGGE VVGRVVETMN GISDSSAKVA DIIGVIEGIA
FQTNILALNA AVEAARAGEQ GRGFAVVAGE VRTLAQRSAA AAREIKDLIG ESVTRVDTGS
KLVEEAGSTI NEIVQAVKRV TDIMSEIAAA SEEQSAGIGQ VNTAVTQMDE VTQQNAALVE
EASAAAQSMA QQAQALRQAV AVFRIADTRP AGSRIVAPAS DPRLSSQTVR MPSPATSTRT
TPFATAGGDT MIATTSRAVD WQEF