Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2791 |
Symbol | mcpA |
ID | 7385926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2323273 |
End bp | 2325141 |
Gene Length | 1869 bp |
Protein Length | 622 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643651835 |
Product | methyl-accepting chemotaxis protein |
Protein accession | YP_002550020 |
Protein GI | 222149063 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATTTT GGTTGGTATC CGTGACGCTC TCGACAGAAC AGAGCCTGTT CTCGCGCCTT CCTCAGTTCG TCGGAAAGGG ACTATACGTA ATGTTTGGAA TTTCTAGTGT CGCTCGGATG CAGACCCAAT CTTTGAAACT GATCACAGCG AATATTATGA TCTCGGATGT TGATCTGAAC ATTCGTTATA TGAACGATTC CGTCATGGAA CTACTTAAAG AGGCTGAATC TGATCTTAAA AAAGAACTTC CCCGCTTCGA TTTTAACAAA CTCATTGGCA GCAATATCGA TATTTTCCAC AAAAACCCAT CCCATCAGCG CAATATGCTG GCTGCTCTCA AAACGCAGCA CCGGGCGACG ATCTGGGTTG GTCACCGCGC GTTCGATCTC ATCGTCACAC CTTTGCGGGA AAGTGGAAAA ACAACTGGCT TCGTTGTTGA ATGGGCCAAT GCCAAGGAGC GCTTGCAGAA CCTGGATTAC CAGGGGCAGA TGATGGCGAT TAGCCGTTCT CAAGGCATTA TCGAGTTTAC CACGGAAGGT GAGATCGTTA GCGCCAACGA AAACTTCCTC AAAGCCATTG ATTATAAACT GGACGACATA AAGGGTCGTC ACCACAGCAT GCTGGTTGAC CCCGAATACG CAAAATCAGC CGACTACAAA GACTTTTGGG CTGGCTTGCG CCGCGGAGAA GTTCAATCGG CAGAGTTTGT TCGCTACGGC AGGAACGGAA AGAAGGTGGT TATCAACGCT GCCTATAACC CGATCCTTGA TGCCAAGGGC AAGGTTACAA AAGTCGTCAA GTTTGCCACG GACGTGACCG AAAGAGTGAA TGCGGTCAAT GCGATTGGCA GCGCCCTGAC GCGGCTGGCG CAGGGTGATC TGACCTTCAC TCTGGACAAC CCGTTTGCGC CGGATTTTGA AGAACTGCGC CGCACGATGA ATGAAGCATT GACGCAGATG CGCAACACGC TTGGCGCGGT GGCGCATTCA ACCAGCCAGA TCGACAATGG CACGCGCGAA ATCAGCCAGA GCGCCGAAGA TCTGTCCAAG CGGACCGAGC AGCAGGCCGC CTCCCTGGAA GAGACCGCTG CGGCGCTTGA CGAAATTACC GTGAATGTCT CGAATGCATC AAAACGGGCA GAAGAAGCCC GTCATTCGGC ATCGACAGCC AGCGACAATG CGGTGCGCTC TTCAAAGGTG GTTGAGGATG CGGTTGGCGC GATGTCGCGC ATTGAAAATT CGTCCAATCA GATTTCCAAT ATCATTGGGG TGATCGACGA AATCGCCTTC CAGACCAATC TGCTGGCGCT GAATGCCGGT GTCGAGGCCG CTCGTGCCGG TGAAGCAGGC AAGGGCTTTG CCGTGGTCGC GCAAGAGGTT CGCGAACTGG CGCAAAGATC CGCTCAGGCT GCCAAGGAAA TCAAGGAACT GATCCGTAAT TCTTCAAACG AGGTCAGCAC CGGGGTAAGA CTGGTGAGCG AAACAGGCGA GGCGCTTCGG ACGATCCAGC AGAATATCGT TGCGGTCAAT GAACATATGG AGGCCATTAC CAGCTCGGCT CGCGAGCAGG CCACCGGCCT TTCCGAAGTC AATGCAGCCG TAAACCAGAT GGACCAGGTA ACGCAGCAAA ATGCGGCGAT GGTGGAAGAG ACAAATGCCG CCAGCGCAAC GCTTGCCCAG GAAACGGCGC GTCTGCGCGA GTTGATTGAG AAATTCCAAC TGGGCGGTGC CGGTATGCGG CCTTCGTCAC GCCAGCTTGG CGCGGCGACT TCAGCACATC GTCCCACGAC ATCGCCCGCA CGGGAGTTGA TGTCGAAGGT AGCGGGTTCG GTCGCATCCC AATCCGGCGG CGGCTGGAGC GAGTTTTAA
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Protein sequence | MSFWLVSVTL STEQSLFSRL PQFVGKGLYV MFGISSVARM QTQSLKLITA NIMISDVDLN IRYMNDSVME LLKEAESDLK KELPRFDFNK LIGSNIDIFH KNPSHQRNML AALKTQHRAT IWVGHRAFDL IVTPLRESGK TTGFVVEWAN AKERLQNLDY QGQMMAISRS QGIIEFTTEG EIVSANENFL KAIDYKLDDI KGRHHSMLVD PEYAKSADYK DFWAGLRRGE VQSAEFVRYG RNGKKVVINA AYNPILDAKG KVTKVVKFAT DVTERVNAVN AIGSALTRLA QGDLTFTLDN PFAPDFEELR RTMNEALTQM RNTLGAVAHS TSQIDNGTRE ISQSAEDLSK RTEQQAASLE ETAAALDEIT VNVSNASKRA EEARHSASTA SDNAVRSSKV VEDAVGAMSR IENSSNQISN IIGVIDEIAF QTNLLALNAG VEAARAGEAG KGFAVVAQEV RELAQRSAQA AKEIKELIRN SSNEVSTGVR LVSETGEALR TIQQNIVAVN EHMEAITSSA REQATGLSEV NAAVNQMDQV TQQNAAMVEE TNAASATLAQ ETARLRELIE KFQLGGAGMR PSSRQLGAAT SAHRPTTSPA RELMSKVAGS VASQSGGGWS EF
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