More than 300 homologs were found in PanDaTox collection
for query gene Smal_1169 on replicon NC_011071
Organism: Stenotrophomonas maltophilia R551-3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010717  PXO_00041  chemotaxis protein  54.45 
 
 
752 aa  717    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  57.38 
 
 
755 aa  702    Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  63.97 
 
 
705 aa  643    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  52.7 
 
 
733 aa  680    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00046  chemotaxis protein  53.96 
 
 
753 aa  683    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3537  methyl-accepting chemotaxis sensory transducer  68.03 
 
 
843 aa  642    Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  100 
 
 
740 aa  1493    Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1851  methyl-accepting chemotaxis sensory transducer  64.93 
 
 
745 aa  619  1e-176  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195185 
 
 
-
 
NC_011071  Smal_3896  methyl-accepting chemotaxis sensory transducer  67.36 
 
 
706 aa  608  1e-173  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.337027  normal  0.882129 
 
 
-
 
NC_011071  Smal_3007  methyl-accepting chemotaxis sensory transducer  49.41 
 
 
707 aa  585  1e-166  Stenotrophomonas maltophilia R551-3  Bacteria  normal  decreased coverage  0.00177393 
 
 
-
 
NC_010717  PXO_00045  chemotaxis protein  49.34 
 
 
691 aa  548  1e-154  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.505093  n/a   
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  47.79 
 
 
793 aa  543  1e-153  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  74.02 
 
 
797 aa  483  1e-135  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  67.87 
 
 
775 aa  465  1e-129  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_007298  Daro_0728  histidine kinase, HAMP region: chemotaxis sensory transducer  40.32 
 
 
792 aa  436  1e-121  Dechloromonas aromatica RCB  Bacteria  normal  0.066629  normal 
 
 
-
 
NC_007298  Daro_0729  PAS  58.27 
 
 
945 aa  373  1e-102  Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_008463  PA14_02220  putative chemotaxis transducer  57.4 
 
 
679 aa  370  1e-101  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.329962  normal 
 
 
-
 
NC_009656  PSPA7_0256  chemotaxis transducer  58.66 
 
 
679 aa  366  1e-100  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2091  methyl-accepting chemotaxis sensory transducer  53.23 
 
 
656 aa  357  3.9999999999999996e-97  Shewanella sp. MR-4  Bacteria  normal  normal  0.684691 
 
 
-
 
NC_009052  Sbal_2114  methyl-accepting chemotaxis sensory transducer  53.45 
 
 
657 aa  357  3.9999999999999996e-97  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3633  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.61 
 
 
845 aa  357  5e-97  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.522396 
 
 
-
 
NC_008322  Shewmr7_1883  methyl-accepting chemotaxis sensory transducer  53.23 
 
 
656 aa  357  5e-97  Shewanella sp. MR-7  Bacteria  normal  normal  0.113479 
 
 
-
 
NC_008577  Shewana3_2216  methyl-accepting chemotaxis sensory transducer  53.27 
 
 
657 aa  357  5e-97  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  54.29 
 
 
1123 aa  353  5e-96  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  50.9 
 
 
767 aa  353  7e-96  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_2245  methyl-accepting chemotaxis sensory transducer  52.97 
 
 
664 aa  353  7e-96  Shewanella baltica OS185  Bacteria  normal  0.232427  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  58.1 
 
 
572 aa  352  1e-95  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_009997  Sbal195_2362  methyl-accepting chemotaxis sensory transducer  52.61 
 
 
664 aa  352  1e-95  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2100  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.48 
 
 
665 aa  352  1e-95  Shewanella baltica OS223  Bacteria  normal  0.328344  normal 
 
 
-
 
NC_009075  BURPS668_A0206  methyl-accepting chemotaxis protein  57.37 
 
 
793 aa  352  2e-95  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  63.64 
 
 
559 aa  351  3e-95  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_007650  BTH_II0158  chemotaxis protein  59.21 
 
 
779 aa  350  4e-95  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2123  methyl-accepting chemotaxis protein  53.28 
 
 
654 aa  350  5e-95  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  59.42 
 
 
569 aa  349  1e-94  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  50.88 
 
 
860 aa  346  1e-93  Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_011071  Smal_3993  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  60.51 
 
 
701 aa  345  1e-93  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.311816 
 
 
-
 
NC_009831  Ssed_0184  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  52.63 
 
 
863 aa  344  2.9999999999999997e-93  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  59.77 
 
 
559 aa  343  1e-92  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_009092  Shew_0111  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  53.04 
 
 
864 aa  342  2e-92  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  64.8 
 
 
586 aa  339  9.999999999999999e-92  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  49.23 
 
 
678 aa  338  2.9999999999999997e-91  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  65.83 
 
 
579 aa  336  1e-90  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  60.19 
 
 
566 aa  334  4e-90  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  61.4 
 
 
559 aa  332  2e-89  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  59.1 
 
 
584 aa  329  9e-89  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  57.88 
 
 
575 aa  328  2.0000000000000001e-88  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  67.12 
 
 
680 aa  327  7e-88  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  63.16 
 
 
583 aa  326  1e-87  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_013421  Pecwa_4443  methyl-accepting chemotaxis sensory transducer  60.27 
 
 
630 aa  325  2e-87  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  55.28 
 
 
578 aa  324  3e-87  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  49.49 
 
 
589 aa  324  5e-87  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_012917  PC1_4161  methyl-accepting chemotaxis sensory transducer  60.47 
 
 
628 aa  323  8e-87  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  67.84 
 
 
592 aa  322  9.999999999999999e-87  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  53.85 
 
 
562 aa  322  9.999999999999999e-87  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  62.2 
 
 
566 aa  322  1.9999999999999998e-86  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_012791  Vapar_0687  methyl-accepting chemotaxis sensory transducer  65.05 
 
 
433 aa  321  3e-86  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  53.66 
 
 
610 aa  320  3.9999999999999996e-86  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_0523  methyl-accepting chemotaxis sensory transducer with Cache sensor  67.73 
 
 
608 aa  321  3.9999999999999996e-86  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  61.9 
 
 
557 aa  321  3.9999999999999996e-86  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  61.9 
 
 
557 aa  321  3.9999999999999996e-86  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc0606  putative methyl-accepting chemotaxis transmembrane protein  67.38 
 
 
617 aa  320  7e-86  Ralstonia solanacearum GMI1000  Bacteria  normal  0.535208  normal  0.212062 
 
 
-
 
NC_010682  Rpic_0536  methyl-accepting chemotaxis sensory transducer with Cache sensor  67.73 
 
 
609 aa  320  7e-86  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A2418  methyl-accepting chemotaxis protein  54.93 
 
 
659 aa  320  7.999999999999999e-86  Vibrio cholerae O395  Bacteria  hitchhiker  0.00134538  n/a   
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  56.9 
 
 
598 aa  319  9e-86  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  60.96 
 
 
579 aa  319  1e-85  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  61.9 
 
 
557 aa  319  1e-85  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  67.4 
 
 
585 aa  318  2e-85  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  54.42 
 
 
661 aa  318  2e-85  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  65.87 
 
 
515 aa  317  4e-85  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_012880  Dd703_2108  methyl-accepting chemotaxis sensory transducer  53.43 
 
 
556 aa  317  4e-85  Dickeya dadantii Ech703  Bacteria  normal  0.0190315  n/a   
 
 
-
 
NC_007336  Reut_C6319  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  65.25 
 
 
601 aa  317  4e-85  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  57.55 
 
 
542 aa  317  4e-85  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  59.68 
 
 
584 aa  317  4e-85  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  66.54 
 
 
584 aa  317  5e-85  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  66.54 
 
 
584 aa  317  6e-85  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_007951  Bxe_A0121  methyl-accepting chemotaxis sensory transducer  61.09 
 
 
618 aa  317  6e-85  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.487659 
 
 
-
 
NC_008752  Aave_0421  methyl-accepting chemotaxis sensory transducer  63.16 
 
 
618 aa  317  6e-85  Acidovorax citrulli AAC00-1  Bacteria  normal  0.627209  normal 
 
 
-
 
NC_010681  Bphyt_0409  methyl-accepting chemotaxis sensory transducer  58.81 
 
 
585 aa  317  6e-85  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  63.48 
 
 
515 aa  316  8e-85  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_007348  Reut_B5602  methyl-accepting chemotaxis sensory transducer  60.24 
 
 
594 aa  316  9.999999999999999e-85  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  63.89 
 
 
615 aa  315  9.999999999999999e-85  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  60.07 
 
 
580 aa  316  9.999999999999999e-85  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  63.89 
 
 
615 aa  315  9.999999999999999e-85  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  62.85 
 
 
527 aa  316  9.999999999999999e-85  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  63.48 
 
 
515 aa  315  1.9999999999999998e-84  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  55.11 
 
 
591 aa  314  2.9999999999999996e-84  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  70.98 
 
 
513 aa  314  2.9999999999999996e-84  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  57.83 
 
 
577 aa  315  2.9999999999999996e-84  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  70.98 
 
 
513 aa  314  2.9999999999999996e-84  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_010627  Bphy_7569  methyl-accepting chemotaxis sensory transducer  69.2 
 
 
576 aa  314  3.9999999999999997e-84  Burkholderia phymatum STM815  Bacteria  normal  0.448898  normal  0.153923 
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  53.03 
 
 
589 aa  313  4.999999999999999e-84  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  60.54 
 
 
573 aa  313  5.999999999999999e-84  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_010681  Bphyt_0231  methyl-accepting chemotaxis sensory transducer  61.11 
 
 
324 aa  313  5.999999999999999e-84  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  63.58 
 
 
551 aa  313  6.999999999999999e-84  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  60.82 
 
 
552 aa  313  7.999999999999999e-84  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0055  methyl-accepting chemotaxis sensory transducer  59.18 
 
 
628 aa  313  7.999999999999999e-84  Dickeya zeae Ech1591  Bacteria  normal  0.608397  n/a   
 
 
-
 
NC_007953  Bxe_C0847  methyl-accepting chemotaxis sensory transducer  62.11 
 
 
516 aa  313  9e-84  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.024141 
 
 
-
 
NC_013421  Pecwa_3123  methyl-accepting chemotaxis sensory transducer  58.61 
 
 
555 aa  312  1e-83  Pectobacterium wasabiae WPP163  Bacteria  decreased coverage  0.000142041  n/a   
 
 
-
 
NC_012857  Rpic12D_4286  methyl-accepting chemotaxis sensory transducer  63.48 
 
 
522 aa  312  1e-83  Ralstonia pickettii 12D  Bacteria  normal  0.246906  normal  0.38481 
 
 
-
 
NC_010678  Rpic_4174  methyl-accepting chemotaxis sensory transducer  63.48 
 
 
522 aa  312  1e-83  Ralstonia pickettii 12J  Bacteria  normal  0.0753508  normal 
 
 
-
 
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