Gene Smal_1169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1169 
Symbol 
ID6475021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1329236 
End bp1331458 
Gene Length2223 bp 
Protein Length740 aa 
Translation table11 
GC content65% 
IMG OID642730334 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_002027557 
Protein GI194364947 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCCT TACGAAACCT CCGTGTGGGT TCCCGGCTGG GTGCCGGTTT CGGTCTGCTG 
TTGCTGTTCA TCGTGGCCAT CGTCGGCCTG GCGCTGTACG GAAATCACCT GAAGTCCGCC
CAGTTCGAGA AAGTGGTGGA CGTCAACATG GTGAAGATGC GGCTGTTGAA CGACATGCTG
GATACCAACA ACGCGGTGTT GATGCACCGC CGGCTGATGG TGATCAAGCG CGGCGAGGAT
TTCGACAAGG ATTATCAGAA GGCGCAGGAG CTGTCGCAGA CCTACGACGG CATCTGGGCC
AAATACATCA AGATTCCGCG TGATGCCACC GGCGATACCC TGGTTGCGAA AATCGACGCG
GCACGCAAGG CCACCGATAC GTCGACCCAG CATCTACACG ATCGGATGAA GGCCGGTGAT
TTCGACGGCG CGGCCAAGGA GCTGCTGGCC GAGCATGGCT TGGCCACCGC CTGGAACGAA
TCCATCTCGG CCCTGCTTCG GCATCAGGAA ATGCTGACCG AACGGAGTCG TGAGGAATAT
CGGTCGACCG AAGCCTGGAC TGGCACCTTG TCGATTGTGT TCGGCGTACT GAGCCTGCTG
CTCGGTTCGT TGGCCGCCTG GGCCATCACC CGCAGCCTGA CCCGCCCGCT GGAAGGCGCG
GTGAAACTGG CCGACGGCAT CGCCAACGGG CGGCTGGACA GCAGCATCGA CGCCTCGGGC
AACGATGAGG TGACGCAGCT GCTCAGGTCG ATGCAGCGCA TGCAGGCACA GCTGCAGGCG
GTGATGGCGG CGCAGGGTGA GCTGGCGCGC CAGCACGATG CGGGCAGCCT CAGCTACCGC
ATGGACGAGA GCGCGTTCCC CGGCGACTAC GGGCGCATGG TGCATGAGAC CAATGCGCTG
GTTGGATCGC ACGTGCAGGT GCAGAACCGG CTGATCGAGG TGATGAAGCA CTACGCACGC
GGCGATCTGT CGGTGGACAT GGACCCGCTG CCCGGCGAGA AGGCGGCGAT CACCCAGGCG
ATGGACGAAA CCAAGTCCAG CTTGTCGGCG ATCAACAGCG AGATCCGCCG CTTGGCAACC
GCCGCTGCCG CAGGCGACTT CAGCCTGCGC GGCGACGAAG ATCGCTTCGC CTATGATTTC
CGCGACATGG TGGCCGGGCT CAATCGCCTG ATGCAGACCA CTGACGAGAA CCTGGTGCAG
GTCTCGACCC TGCTGCAGGC CATCTCGCGC GGCGACCTGA CCGTGCGTAT GCAGGGTGAC
TTCCATGGCG TGTTCGCGCG CATGCGTGAT GACTGCAATG CCACCGTCGA TCAGCTCAAG
CAGATTGTCG GCCGCATCCA GTCCAGCGCG TCCAGCATCA ACCTGGCGGC AGGCGAGATC
GCCTCGGGAA ACACCGATCT GTCGCGGCGC ACCGAGCAGC AGGCGGCGAA CCTGGAAGAG
ACGGCGGCAT CGATGGAGGA GCTGACCTCC ACCGTGAAGC AGAACGCCGA GCATGCCCGC
CAGGCCAACC AGCTCGCGAT TGGTGCGCAC GGTGTCGCCT CGCAGGGCGG CGAGGTGGTC
GGCCAGGTGG TCACCACGAT GTCGGCCATC GAAGCCTCGT CGAAGAAGAT CGCCGAGATC
ATCAGCGTCA TCGACGGCAT CGCGTTCCAG ACCAACATCC TGGCGTTGAA CGCGGCGGTG
GAAGCTGCGC GTGCCGGTGA GCAGGGCAGG GGCTTTGCGG TGGTGGCCAG TGAGGTGCGC
ACGCTGGCAC AGCGCTCGGC CGGTGCGGCC AAGGAGATCA AGGGCCTGAT CGAGGATTCG
GTGGGCAAGG TGGCCGACGG ATCGGCGCTG GTCCGTCAGG CTGGCACGAC CATGGGCGAG
ATCGTCGCCT CGGTGCAGCG GGTGACCGAC ATCATGGCCG ACATCTCCGC CGCCTCGCAG
GAGCAGAGCT CGGGCATCGA GCAGGTGAAC CAGGCGGTAG TGCAAATGGA CGAGACCACC
CAGCAGAACG CTGCCCTGGT GGAAGAAGCG AGCGCCGCCG CACGCTCGAT GGAGGAGCAG
TCCAACCTGC TGGCCGAGGC GGTATCGGTG TTCCGCACTG GCGCGGTGAC GGCCGCAGCT
GCAGTACGCC CGGCCTTGGC CGCAGTGGCT GCCACGGTTA CCCCGGTGCG CCGTCCGGCA
TCGCTGTCGC CACGCATCGA ACCAACGCTG GCGGCCAATG CGGGCGGCTG GGAAGAGTTC
TAG
 
Protein sequence
MLALRNLRVG SRLGAGFGLL LLFIVAIVGL ALYGNHLKSA QFEKVVDVNM VKMRLLNDML 
DTNNAVLMHR RLMVIKRGED FDKDYQKAQE LSQTYDGIWA KYIKIPRDAT GDTLVAKIDA
ARKATDTSTQ HLHDRMKAGD FDGAAKELLA EHGLATAWNE SISALLRHQE MLTERSREEY
RSTEAWTGTL SIVFGVLSLL LGSLAAWAIT RSLTRPLEGA VKLADGIANG RLDSSIDASG
NDEVTQLLRS MQRMQAQLQA VMAAQGELAR QHDAGSLSYR MDESAFPGDY GRMVHETNAL
VGSHVQVQNR LIEVMKHYAR GDLSVDMDPL PGEKAAITQA MDETKSSLSA INSEIRRLAT
AAAAGDFSLR GDEDRFAYDF RDMVAGLNRL MQTTDENLVQ VSTLLQAISR GDLTVRMQGD
FHGVFARMRD DCNATVDQLK QIVGRIQSSA SSINLAAGEI ASGNTDLSRR TEQQAANLEE
TAASMEELTS TVKQNAEHAR QANQLAIGAH GVASQGGEVV GQVVTTMSAI EASSKKIAEI
ISVIDGIAFQ TNILALNAAV EAARAGEQGR GFAVVASEVR TLAQRSAGAA KEIKGLIEDS
VGKVADGSAL VRQAGTTMGE IVASVQRVTD IMADISAASQ EQSSGIEQVN QAVVQMDETT
QQNAALVEEA SAAARSMEEQ SNLLAEAVSV FRTGAVTAAA AVRPALAAVA ATVTPVRRPA
SLSPRIEPTL AANAGGWEEF