Gene Rleg_5255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5255 
Symbol 
ID8007429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp669089 
End bp670846 
Gene Length1758 bp 
Protein Length585 aa 
Translation table11 
GC content58% 
IMG OID644822163 
Productmethyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 
Protein accessionYP_002973423 
Protein GI241113588 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.700683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGCTC TTGCCGCTTT ATCAAATTCG CAGGCCATGA TCGAGTTTGA CTTATCGGGC 
AAGATCCTCA CCGCGAATGA AAACTTCTGC CGGGCGCTCG GCTACGAGTT GAGGGAGATC
GTCGGAAAAC ATCACAGCAT GTTTGTCGAA CCTGCCTACG CATCCTCGGC GGAATACACG
GCTTTCTGGA CAAAGCTGTC AGCGGGGAAA TTCGATCAAC AACAATATAA GCGGGTCGGA
AAAGGCGGGC GCGAGGTCTG GATCGAGGCA TCCTACAATC CCGTGTTCCG ACGCGGGAAG
CCGGTCAAGG TTATCAAGAT TGCAACTGAC ATCACTGCGC AGAAGCTGAA GTCTGCCGAG
GATTCGGGCA AGATCGACGC ATTGTCCCGG GCTCAGGCGA TCATCGAATT CACGCCGGTC
GGCGAAATCC TGACCGCGAA CGACAACTTC CTGTCCGCGC TAGGTTATTC GCTTGCCGAA
ATCCAGGGCA AACATCATTC GATGTTCTGT GAAGCCGACT ACTCGAGGTC GGAGGCTTAT
AAGGAATTCT GGCGGAGACT TGCGAGCGGT CAGCTGGTCG CCGACGAATT CATGCGCGTG
GGCAAGGGCG GACGGAAGGT CTACATCCAG GCTTCCTACA ATCCGATTTT CGACCTGAAC
GGCAAAGTGT TCAAAGTCGT GAAGTTCGCA ACCGATGTCA CGGCGCGCGT CGAAAATGTC
GAACAACTTG CCCGTTGCCT GACGAATCTT GCGGACGGTG ACCTGTCGCA GATGATCCAG
AAGCCTTTCA TTCCTTCGCT GGAAAGGCTG CGTGCCGACT TCAACAGCGC CTCGGAAAAG
TTGAAGGGTG CAATGGCAAC GGTTGCCGAA AATGCCAAGG CGATCTCAGC CGGTTCCAAC
GAAATCCGCA CAGCGGCCGA CGACCTGGCA AAGCGTACCG AGCAGCAAGC GGCATCCGTC
GAGGAGACGG CCGCCGCCCT TGAGGAAATC ACGACGACGG TCAAGGATTC GAGCCGCCGC
GCCGAGGAAG CCGGTCAACT CGTGGGGCGC GCCAGAAATC ACGCCGAGCA TTCCGGCCAG
GTGGTGCGTG ACGCCATCGG AGCGATGGAC CAGATTGAAA ACTCGTCACG GGAAATTTCC
AATATCATCG GTGTCATCGA TGAGATTGCC TTCCAGACGA ACCTTTTGGC GCTCAATGCC
GGCGTCGAGG CGGCACGAGC TGGGGAGGCT GGCAAGGGGT TTGCGGTCGT TGCCCAGGAG
GTTCGTGAGC TGGCGCAGCG GTCGGCGAAA GCTGCCAAGG AGATAAAGAG CCTGATCACA
GCGTCCGGTT CCCATGTCGC AAACGGCGTC GCCCTTGTCA CGAATGCCGG ATCCGCGCTC
CAGGAAATCG CCACTCAGGT TCACGAAATC AATACCAACG TCACGGCGAT CGTGGAGGCG
GCGCGCGAGC AATCGACTGC GCTCGGTGGG ATCAGCCAGT CCATCAACAC CGTCGACCAG
GGAACGCAGC AGAATGCCGC AATGGTCGAA GAGCAGACGG CTGCAAGCCA TGGTCTCGCA
CGAGAGGCTG CCGCGCTCTT CGAGCTTCTT GAACAGTTCC GTTTCAACGA TGCGCCGAGA
TCCAGGACTT CGTTTGCGCC GGCGGATCGT CACCCTGCCC CACCGACGCC TTTGAAAGTC
GTTCGTACTT CGCCCCTCGC GTCCATCCAG CGCGGTTCGG CCTCCGTCGC GCTGAAGTCC
GACTGGGAAG AGTTCTGA
 
Protein sequence
MAALAALSNS QAMIEFDLSG KILTANENFC RALGYELREI VGKHHSMFVE PAYASSAEYT 
AFWTKLSAGK FDQQQYKRVG KGGREVWIEA SYNPVFRRGK PVKVIKIATD ITAQKLKSAE
DSGKIDALSR AQAIIEFTPV GEILTANDNF LSALGYSLAE IQGKHHSMFC EADYSRSEAY
KEFWRRLASG QLVADEFMRV GKGGRKVYIQ ASYNPIFDLN GKVFKVVKFA TDVTARVENV
EQLARCLTNL ADGDLSQMIQ KPFIPSLERL RADFNSASEK LKGAMATVAE NAKAISAGSN
EIRTAADDLA KRTEQQAASV EETAAALEEI TTTVKDSSRR AEEAGQLVGR ARNHAEHSGQ
VVRDAIGAMD QIENSSREIS NIIGVIDEIA FQTNLLALNA GVEAARAGEA GKGFAVVAQE
VRELAQRSAK AAKEIKSLIT ASGSHVANGV ALVTNAGSAL QEIATQVHEI NTNVTAIVEA
AREQSTALGG ISQSINTVDQ GTQQNAAMVE EQTAASHGLA REAAALFELL EQFRFNDAPR
SRTSFAPADR HPAPPTPLKV VRTSPLASIQ RGSASVALKS DWEEF