| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2952 |
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| Symbol | |
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| ID | 7386127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2468453 |
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| End bp | 2470180 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643651954 |
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| Product | sensory methylation accepting chemotaxis protein |
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| Protein accession | YP_002550139 |
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| Protein GI | 222149182 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACTGT TGTCGTTTGG CTTCGGTGCG GACAATAAAG GCGTTTTGGA AGCCGTCAAT
CGGTCCCAGG CCATTATTGA ATTTGACCTC AATGGCAATA TCCTTGATGC GAATGAAAAT
TTCTGCAAAG CGATCGGCTA TAAAAGATCG GAGATCGTCG GAAAGCACCA CCGGATTTTT
GTCGATCCCG AAGACGTGAA AAATCCAGCC TATGCAGAGT TCTGGGCGAA ACTCGGCTCC
GGTCAGTTCG ATCAAGGGCA GTACAAACGA TTGACCAAGA CCGGGGAATC GATCTGGATC
GAAGCCTGTT ACAATCCGGT TTTTCGGGGC AAAAAGCCCT ACAAGGTCGT GAAAATCGCA
ACCGACATAA CGGCTGCGAA GACCAAAACC ATGGACAGTG ACGGCAAGAT TGATGCGCTG
ATGCGCTCTC AAGCCGTCAT TGAATTCACG CCAACCGGCC AGATTCTCAC AGCCAACGAG
AATTTCTGCA AAACATTGGG CTATAGCTTA AGCGAAATCG TCGGCAAGCA TCATTCGATG
TTCTGCGAAC CCGCCTATGC TGCCTCGCCT GAATACAAGC AATTCTGGCG CAGCCTCGCT
GCGGCCGAAT ATCAGAGCAA CGAATTTCTG CGCATCGGCA ACGGTGGAAA ACACGTTCAT
ATTCAAGCCA CCTACAATCC AATTTTCGAT GAAAAGGGGA AAGTCATTAA GGTTGTGAAA
TTCGCAACCG ATGTGACTGG CCGCGTCAAA GCCATCGACG CCATCGCTGC CGGTCTGGAA
CGTCTTTCAA ACTGCAATAT CCGCATGACA ATCGACGAAC CGTTCATTCC GACCTTCGAC
CACCTGCGCA AACACTTCAA CATGTCGATC AGCAAGTTTC AGGAGACACT TGTACAGGTG
CTGACGGAAA CGGCATCCGT GGCCGCCAAC AGCCGGGAAG TCCAGGAAAG CTCCACGAGT
CTCGCCCAAC GCTCTGAACA ACAGGCCGCC GCACTTGAGC AAACCTCAGC CGCATTGGAG
GACATTACCA CCGTCGTTAA TCAATCCAGT GCGAGCACCA AGAACACCAG AGATCTGGTG
CGTGATGCGC GCCAGGCAGC GACCGAATCC GTGAAAGTCG TCAACTCGAC GGTGGACGCG
ATGAGCCGCA TCGAGGGTGC TTCGCAGGAA ATCAGCAACA TCATCAGCGT CATCGATGAA
ATCGCCTTCC AGACCAATCT CCTGGCCTTG AACGCGGGCG TGGAGGCCGC CCGTGCTGGC
GAAAGCGGCA AGGGCTTTGC TGTCGTGGCA CAAGAAGTGC GCGAACTGGC CCAGCGTTCC
GCCAAGGCCG CCAAGGAAAT CTCGGAGCTG ATCGGCAAAT CCAGCAATGA AGTAAAAGAC
GGTGTACGTT TGGTCGGGGA AACAGGCAGT GCTCTGAACC GGATCGAATC CTTCGTTCAG
TCCATCGATG ACAATATCGA GGCCATTGCC ACAGCCGCAA TAAAGCAATC CACCAGCCTT
GGCGAAATCA GTTCCGCAGT GAATGCGCTG GATCAGATGA CGCAAAAGAA CGCCGGCATG
GTCAATACGA TCAACACCAT CAGCGACGCG CTTTCCAGCG GCGCTGCCAA GCTGACAGAA
CTGGCCAGCC GGTTCCAGCT GAACAGACGA TCAACGATCC GTGGGCCGGG AAGCAACGCT
GCAATGCGCG TCGACAGCAG GCGGGACAGC AACCGCAACG CGGCCTGA
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| Protein sequence | MGLLSFGFGA DNKGVLEAVN RSQAIIEFDL NGNILDANEN FCKAIGYKRS EIVGKHHRIF
VDPEDVKNPA YAEFWAKLGS GQFDQGQYKR LTKTGESIWI EACYNPVFRG KKPYKVVKIA
TDITAAKTKT MDSDGKIDAL MRSQAVIEFT PTGQILTANE NFCKTLGYSL SEIVGKHHSM
FCEPAYAASP EYKQFWRSLA AAEYQSNEFL RIGNGGKHVH IQATYNPIFD EKGKVIKVVK
FATDVTGRVK AIDAIAAGLE RLSNCNIRMT IDEPFIPTFD HLRKHFNMSI SKFQETLVQV
LTETASVAAN SREVQESSTS LAQRSEQQAA ALEQTSAALE DITTVVNQSS ASTKNTRDLV
RDARQAATES VKVVNSTVDA MSRIEGASQE ISNIISVIDE IAFQTNLLAL NAGVEAARAG
ESGKGFAVVA QEVRELAQRS AKAAKEISEL IGKSSNEVKD GVRLVGETGS ALNRIESFVQ
SIDDNIEAIA TAAIKQSTSL GEISSAVNAL DQMTQKNAGM VNTINTISDA LSSGAAKLTE
LASRFQLNRR STIRGPGSNA AMRVDSRRDS NRNAA
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