| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4091 |
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| Symbol | mcpA |
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| ID | 7388889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3445543 |
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| End bp | 3447321 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643652797 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_002550970 |
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| Protein GI | 222150013 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTCGAG AAATACAAAC ATCACGACTA AAAGCACCAC GGCGTCATCA GGGAATGCCC
CAACAGGATA CGCGTGCTAC AGGACACAGA GGAAGAACGA TGCTGGGTTT CGGTTCAGAT
GCAGAAAACA TTCTGTCGGC GCTTGCAAAA TCTCAGGCCG TCATTGAGTT CGATCTCGAA
GGCACGATCA TCACCGCCAA CGACGTGTTC TGTCGGTTGA TGGGATATCG GCCTGAAGAA
CTCAAAGGGC GCAAGCACGC GCTGTTTTGT GATCCTTCCT ATGTGTCCTC TGCGCAATAT
AAGGCCTTCT GGCAAAAGCT GTCAGGCGGG CAATCCGAAA CGGCCACCTT CAAGCGGATC
AACAAGGCAG GCCAGGAGGT CTGGATCAAC GGCTCCTATA ATCCCGTCTG CAACAGCCGA
GGCAAGCCCT ACAAGGTGGT AAAGATCGCA GCCGATGTCA CCACCGCACA GTTGCAGACC
CTCGAAGACC GCGGCAAGAT GGCCGCGATT TCACGCGCTC AGGCAGTCAT TGAATTTACC
AAGACCGGAG AGATTCTTTC TGCCAACGAA AACTTCCTGA GAGTGCTGGG ATATAGCCTG
GCGGAAATCC AGGGCAAGCA TCATTCGATG TTCTGCGAAC CCTCCTACAC CGCGAGCCGA
GACTACAAAC TGTTCTGGGA AAAACTCAGC AATGGCGAGT TCATCGCAGA AGAGTTCAAG
CGCATCGGCA AGGGCGGTAA AGTGGCATGG ATTCAAGCCT CCTATAACCC GATCTTCGAT
GCCGACGGCA AGGTGATCAA GGTGGTGAAA TTCGCCACCG ATGTCACTGA CCGGGTGCGG
TGCGTGCAGG AAATCGGGCA CGCTTTGCAG GCTCTTTCGG ATGGCGACCT GACGGTGACG
CTGGAGCGGC CTTTTGTGTC AGGCCTCGAC CAGATCCGGC TGGACCTGAA CAATGCCATG
GAAAAACTGA CAACCGCGAT GCGAACCGTG GCCATGAACG CCAATGCAAT CGCCGCTGGA
ACCAACCAGA TCAAATCCGC TTCTGACGAT CTTTCCCGCC GCACTGAGCA GCAGGCTGCC
TCTGTCGAGG AAACCGCCGC AGCCCTTGAG GAAGTAACCC AGACGGTCAC CGACAGCGCA
AAACGGGCCG CCGAAGCCGC CAATCTCGTT GCTCGCACCA AGGCCCAGGC CGAAGCCTCA
AGCCAGGTGG TTCGCAACGC CATTGACGCC ATGGGCCAGA TTGAAAACTC CTCCAATGAG
ATTTCAAACA TCATCGGCGT GATTGACGAT ATCGCCTTCC AGACCAACCT TCTGGCGCTG
AATGCCGGAG TTGAAGCCGC CCGCGCGGGC GAGGCCGGCA AGGGTTTTGC CGTCGTTGCC
CAGGAAGTAC GCGAACTGGC GCAACGCTCT GCCAAGGCCG CCAAGGAAAT CAAACTTCTG
ATCACCACGT CAAGCAACCA AGTCGAAACC GGCGTATCGC TGGTGGGCGA AACCGGCAAG
GCGCTGACGA CGATCCTGGC GGAAGTTCAG GAGGTCAACC GTAATATCGG CGCCATTGTC
GAGGCTACTA GGGAACAGGC AACCGGCCTT AGAGAAATCA ACAAGGCCGT CAACACCATG
GACCAGAATA CCCAGCAGAA TGCCGCCATG GTGGAAGAAA GCTCGGCGGC GAGCCATGGC
CTTGCCCAAC AAACCGAAAA CCTGCGCAAC CTGCTCGAAC AATTTAGATT TGAGAAACAT
TCTTCCGCTA GGATGAGCCA TGACAAATAT GCGGCTTAG
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| Protein sequence | MVREIQTSRL KAPRRHQGMP QQDTRATGHR GRTMLGFGSD AENILSALAK SQAVIEFDLE
GTIITANDVF CRLMGYRPEE LKGRKHALFC DPSYVSSAQY KAFWQKLSGG QSETATFKRI
NKAGQEVWIN GSYNPVCNSR GKPYKVVKIA ADVTTAQLQT LEDRGKMAAI SRAQAVIEFT
KTGEILSANE NFLRVLGYSL AEIQGKHHSM FCEPSYTASR DYKLFWEKLS NGEFIAEEFK
RIGKGGKVAW IQASYNPIFD ADGKVIKVVK FATDVTDRVR CVQEIGHALQ ALSDGDLTVT
LERPFVSGLD QIRLDLNNAM EKLTTAMRTV AMNANAIAAG TNQIKSASDD LSRRTEQQAA
SVEETAAALE EVTQTVTDSA KRAAEAANLV ARTKAQAEAS SQVVRNAIDA MGQIENSSNE
ISNIIGVIDD IAFQTNLLAL NAGVEAARAG EAGKGFAVVA QEVRELAQRS AKAAKEIKLL
ITTSSNQVET GVSLVGETGK ALTTILAEVQ EVNRNIGAIV EATREQATGL REINKAVNTM
DQNTQQNAAM VEESSAASHG LAQQTENLRN LLEQFRFEKH SSARMSHDKY AA
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