| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2091 |
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| Symbol | |
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| ID | 4252664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2491581 |
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| End bp | 2493551 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638118715 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_734221 |
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| Protein GI | 113970428 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.684691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTATTT TCAATGTGTT TGGAAATGAA GAGGCGCGCC AGCAAAAGGA AGAGGAGCTG
CAACGCTATT TCCAATTATT AGATAACAGC GGCAACAGCT TTATGATCGC CGACAGCAAC
CGCAATATTA TCTACGCCAA TAAAGCGGTA TTGAATATGT TATCCGAGGC TGAGGCGGAC
ATTCGCAAAG AGCTGCCGCA GTTCTCTGTG GCCAAGGTGG TGGGCAGTAA TATCGATATT
TTCCATAAAA ACCCGGCCCA TCAACGCAAT ATGCTCGAGC GCCTAACCCA ATCCCATACG
GCGCAAATCA CCATTGGGAA GCGGACTTTT AAACTGATCC TGACGCCCAT TATCACCCGC
GAGAATAAGC ACTTAGGTAC GGGGGTTGAG TGGATTGATA GAACGGAGAG CATAGAGTCC
GAGCGGGCGA CGCAGCGCAT TTTAGAAGCG CTGAATAATA CCAGTACCAA TGTGATGATC
GCCGATGCCA ACCGCACCAT CATCTATATG AACCGCTCGG TGGAATTGAT GCTGCGCCAA
TCAGAGAATG AGATCAGGCA AGCGCTGCCG CATTTCTCCG TCGATAAAAT TCTTGGCAGC
TCGATGGATA TTTTCCATAA GAATCCTGCC CATCAAGCCA GTCTGTTAGA CAAGCTCGAC
CGTAAATATG AATCGCAAAT CAAAGTGGCC AGTTGTCACT TCCGCTTAAC CGCAAGCCCG
ATTATTTCCA AAACGGGTGA GCGGTTAGGT TCTGTCGTCG AATGGCTCGA CCGCACGGTC
GAAGTGCAAA TCGAGCAGGA AATCTCGCGG ATCGTCAATG CGGCGGCGGC GGGAGATTTC
TCCCAACGGG CTGAGACACA AGGTAAGCAG GGCTTCTTCT TAATGCTGGC CAACAGCCTC
AATGCTTTGA TTGAAACCTC GGATCGCGGT CTACAGGATG TGGCGCGGGT GTTGATGGCG
CTCGCCGAAG GCGATTTAAC CACGCGTATC TATAACGATT ACGAAGGTAC CTTTAATGAT
TTGAAAAACT ATTCAAATCA AACCGCTGAA AAGCTCTCTT ACATGATAAG AGACATTCAA
AAGGCCGCCG ATACCATCAA TACCGCCTCT TCCGAAATCG CTCAGGGCAA TGCTGATCTG
TCGAGCCGCA CCGAGGAGCA AGCCTCGAGT CTTGAACAAA CCTCGGCGAG TATGGAAGAA
CTGACGGGCA CAGTGAAGCT AAATGCCGAC AACGCTAGCC AGGCCAATGC ACTTGCCTCT
AAGGCCGCCG ATGTCGCCGT CGATGGGGGC GAACTTATCC AGCAAGTGGT GCAAACCATG
GCATCGATTA ACGAATCGGC ACGCAAGATT GCCGATATTA TCGGTGTAAT TGATGGCATA
GCCTTCCAAA CCAATATCTT AGCGCTAAAT GCGGCGGTCG AAGCGGCCAG AGCCGGTGAG
CAAGGTCGTG GATTTGCGGT GGTGGCCTCA GAGGTGAGAA GTTTGGCCCA ACGTTCGGCC
AACGCAGCCA AAGACATTAA AGCCTTGATC TCCGACTCGG TGACCAAAAT CGAAAGCGGT
AACAGCTTAG TCGGCAAATC CGGCGACACC ATGAAAGAAA TCGTCATCGC CATTAAACGG
GTGAACGACA TTATGGCCGA AATTGCCTCA GCCTCGAATG AGCAGGCGAT CGGTATCGAT
GAGATCAGTA AAGCCGTAGT GCAAATGGAT GAAATGACGC AGCAAAACGC GGCCTTAGTG
GAAGAGGCCG CCGCAGCAGC CGAAAGCATG CAATCACAGG CACAGCAGTT AGCGGACAGT
GTGGCCAACT TTACCGTGGA CGAAGACACC ACAGCTGCGC CCAAACCCGT GGCGAGTCAC
AAGAAGTTAG CGGTTAAACC GCCATCGACT GTGACTCGCA TGCCCGTTAA ACCTAAGGCG
ATGGCGCCAA AGGTCAATAA AGCCGACCAA GATGAATGGG AAGATTTTTG A
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| Protein sequence | MGIFNVFGNE EARQQKEEEL QRYFQLLDNS GNSFMIADSN RNIIYANKAV LNMLSEAEAD
IRKELPQFSV AKVVGSNIDI FHKNPAHQRN MLERLTQSHT AQITIGKRTF KLILTPIITR
ENKHLGTGVE WIDRTESIES ERATQRILEA LNNTSTNVMI ADANRTIIYM NRSVELMLRQ
SENEIRQALP HFSVDKILGS SMDIFHKNPA HQASLLDKLD RKYESQIKVA SCHFRLTASP
IISKTGERLG SVVEWLDRTV EVQIEQEISR IVNAAAAGDF SQRAETQGKQ GFFLMLANSL
NALIETSDRG LQDVARVLMA LAEGDLTTRI YNDYEGTFND LKNYSNQTAE KLSYMIRDIQ
KAADTINTAS SEIAQGNADL SSRTEEQASS LEQTSASMEE LTGTVKLNAD NASQANALAS
KAADVAVDGG ELIQQVVQTM ASINESARKI ADIIGVIDGI AFQTNILALN AAVEAARAGE
QGRGFAVVAS EVRSLAQRSA NAAKDIKALI SDSVTKIESG NSLVGKSGDT MKEIVIAIKR
VNDIMAEIAS ASNEQAIGID EISKAVVQMD EMTQQNAALV EEAAAAAESM QSQAQQLADS
VANFTVDEDT TAAPKPVASH KKLAVKPPST VTRMPVKPKA MAPKVNKADQ DEWEDF
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