| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5250 |
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| Symbol | |
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| ID | 4042111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1948822 |
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| End bp | 1950855 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637980668 |
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| Product | methyl-accepting chemotaxis protein, sensory transducer |
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| Protein accession | YP_587378 |
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| Protein GI | 94314169 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0837898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0130353 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTTGC GAAAAATGGG GATCGGGGCG CGGCTGACCT TTGCTTTCAG TCTCGTGGTG
CTGCTGCTCG CCGCGGTTGC CGCGGTTGGG GTGTCGGCGC TGGGCAGCAT GAACGATGCC
ATGCACATGG CGGTGGAGAA GCGGCTGCTG CGGGTGATCG ATCTGAATCA CGCCAAGGCG
CAGGTGCTGA CGATCGGTCT GATGGTGCGC GATGCGGCAT TGACCGAGGA TGCCGCGCTG
GTCACGGCGA ACGCGGCGAA GATCGCCCGG TTCCGCGAGG AAATCGACGC GACGCTCGAA
CCGATCGGCA AGACCCTGGT GGCGTCGGGC AACGCGGAAT GGAAAGCCGT GTTCGAGCAA
CTGACGCAGG CACGCGCCAC CTATGACGGT CAGCTCGACC TGGTCATGCG CCAGCTGGGC
GCAGGGGAAT ACGATGGCGC CCGCGCCGGG CTGACTGCCA CGCTGCCGTC ATCGCAGGCC
GCGTACTTCG ACAAGCTGGA CGCGATCGCC CAGCTTGGCC AGAAGCTGGC CGTGGAGGCG
GTGGAGGATG CAACAGCGCG CTACGCTTTT ACGCGCAACC TTCTGATCGG CATGGCAGCT
CTGGCGGCGA TCATTGCCGC GCTGCTGGGT ATCGGCATGA CACGCTCGGT GACGCGTCCG
GCCCGGCAGG CGCTTGATGC TGCCGAGGCG CTGGAGCAGG GCCAGCTTGC GCACACCATC
GAAGTACGCA GCCAGGATGA GATGGGCCGG ATGCTCGGCG CGCTCGAGCG CGCCTTTGGC
CAGCTCGGCA CGCTGGTTCG CGGCATCCAG CACGCGGCCG GTTCGATCGA CACCGCCGCG
CGCGAGATCT CCAGTGGCAA TACCGATCTG TCCCGCCGTA CCGAGCAGCA AGCGGCATCG
CTGGAGCAGA CTGCCGCGTC AATGGAGCAG TTGACGTCCA CCGTGCGCCA GAACGCCGAG
AACGCGCGAC AAGCCAACCA GCTTGCCGCG AACGCATCGG ATGTCGCCAC CGAAGGCGGC
CGCGTGGTGC GCAGCGTGGT GGATACGATG GACGGCATCA CCCAGTCCTC GGCACGCGTG
GCCGAGATCA TCGGCGTCAT CGAAGGTATC GCATTCCAGA CCAACATTCT TGCGCTGAAC
GCCGCTGTGG AAGCGGCGCG TGCCGGCGAG CAAGGTCGTG GCTTCAGCGT TGTGGCGGCC
GAAGTGCGCA GCCTGGCGCA GCGTTCATCG TCGGCGGCCA AGGAAATCGG CGATCTGATC
AATGGCTCCG TGCGGCAGGT AAAGGAGGGC GCGCGCCAGG TCGAAGTAGC CGGCAAGACC
ATGGATGACA TCGTCGGCGC GGTACGCCGC GTCACGGACA TCATGGGCGA GATCACCGCC
GCCAGCGAGG AGCAGAGCGC CGGCATCGAG CAGGTGGGCC TGGCGATTGC GCAGATGGAA
ACCGTGACGC AGCAGAATGC CGCGCTGGTG GAAGAAGCCA GTGCTGCCGC CGAAAGCCTG
ATGCAGCAGG CCGGCGGGCT GGTGACGGAA GTCGCGCGTT TCGATCTGGG CCAGCAACAG
CAGCGCGAAG TGCCGCGCGC GCCGGGGCCC GTGGCAGTCG TTGCGCAGCC GGTTCAACCG
GCGCCACGCT TGCCCGCTGC TGCGCCGAAG GCATTGACGC CGAGGCCATC GCCCCAGAAG
GCATTGACCC AGAAGGTATC GACCCAGAAG GTATCGACCC AGAAGGTATC GACCCAGAAG
GTATCGACCC AGACGGCCGC CGCTGCCCCG CAGCGCCCGG TGCAGCCATC ACACCAATTG
CGCGCGCCCG CAGTGCCCGC CGCCGTGCGA CCGCCCGTGG TACGCAAGAC CTCGGCGGCC
CCGGTACTGG CGCGCCAGCC AGCCACGCCA GCCAAGGCCC GCCAGCCGGT CACCCATCAG
CGCAAGGAAC CCGTACTGGC TACGCCCTCG AGCCGTCGGC CCGTGGCAAA GGCGAGGCCA
TCGGCCGCAC CGGTGCCCGC GACGGCCGAT GGCGGCGATT GGGAAACGTT CTGA
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| Protein sequence | MGLRKMGIGA RLTFAFSLVV LLLAAVAAVG VSALGSMNDA MHMAVEKRLL RVIDLNHAKA
QVLTIGLMVR DAALTEDAAL VTANAAKIAR FREEIDATLE PIGKTLVASG NAEWKAVFEQ
LTQARATYDG QLDLVMRQLG AGEYDGARAG LTATLPSSQA AYFDKLDAIA QLGQKLAVEA
VEDATARYAF TRNLLIGMAA LAAIIAALLG IGMTRSVTRP ARQALDAAEA LEQGQLAHTI
EVRSQDEMGR MLGALERAFG QLGTLVRGIQ HAAGSIDTAA REISSGNTDL SRRTEQQAAS
LEQTAASMEQ LTSTVRQNAE NARQANQLAA NASDVATEGG RVVRSVVDTM DGITQSSARV
AEIIGVIEGI AFQTNILALN AAVEAARAGE QGRGFSVVAA EVRSLAQRSS SAAKEIGDLI
NGSVRQVKEG ARQVEVAGKT MDDIVGAVRR VTDIMGEITA ASEEQSAGIE QVGLAIAQME
TVTQQNAALV EEASAAAESL MQQAGGLVTE VARFDLGQQQ QREVPRAPGP VAVVAQPVQP
APRLPAAAPK ALTPRPSPQK ALTQKVSTQK VSTQKVSTQK VSTQTAAAAP QRPVQPSHQL
RAPAVPAAVR PPVVRKTSAA PVLARQPATP AKARQPVTHQ RKEPVLATPS SRRPVAKARP
SAAPVPATAD GGDWETF
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