Gene Gura_2989 details

Gene Information

• Locus tag: Gura_2989
• ID: 5165976
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter uraniireducens Rf4
• Kingdom: Bacteria
• Replicon accession: NC_009483
• Strand: -
• Start bp: 3453011
• End bp: 3456292
• Gene Length: 3282 bp
• Protein Length: 1093 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 640550484
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_001231734
• Protein GI: 148265028
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein; [COG4564] Signal transduction histidine kinase
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.653084
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTATCT TACGTTTTAA AGACTGGAAC ATTGCGGCAA AAGTTATGAG CATTTCCCTT 
GTTACGGTTT TGCTCATCTC CGCGGTCAAT TTTTTCTATC TGTTGCCCGA TGTGGAAAAA 
AAGGTGCTGG GAGAGAGAGA ATCTACATTG AAATCCGTTG TAGCTCTTCC CGTTGGACTG 
ATTGCTGAAT ATGAAGAAAG GGCGAAAAAA GGTGAATTTA CCCTGGAAGA AGCCCAGAAA 
AGGGCAAAAG CACGGATTAA GCAGTTGCGC TATGGCGGTA ACGAATATTT CTGGATCAAT 
GACCTTAACG CAAAAATTAT CATGCATCCA ATCAAGCCGG AGCTGGATGG TCAGGATCAG 
TCGGGCATGA AAGATCCTGA GGGCAAGGCG GTTTTTGTCG AGTTTGTTAA TGTATCCAAG 
GCCAAGGGGG AAGGTTTTGT GAAATACCTC TGGCCGAAGC CCGGAACAAC CGCTGCCGTT 
CAAAAAATTT CTTACGTCAA ACTTTATCAA CCTTGGGGTT GGATCGTCGG CAGCGGTCTC 
TACGTCGATG ACATGCAAAA GGAGATGGCG GCGTTGCGCT GGAAAATAGC TGTAACCACG 
CTCTTGATCG TCGGCGTAGT CCTCCTGTTG GCGTACGTTA TTTCATCCAG GATCAGCAGG 
AGCATAAAAA AACTCATGTC TGCCGCAGAC GAGCTTGCAC TGGGGGATGT TGAGGTAATG 
ATAACATCTG ATTCCGGGGA TGAAACCGGA AAGCTCGCCC ACTCTTTCAA TAAAATGGTG 
ACGAACATCA AGGAGGCCGC CAGGGTAGCT GAAAGGATTG CTGTGGGAGA TCTGGAGGTC 
GAGTTTACGA TAAAATCCGA CAAGGATGTC CTCTCCCGGA ATCTCAAAAC CACGGTCGAT 
GCGGTTAAAT CCATGGTCGG CGACGCCAAC ATGTTGGCCA AGGCGGCCGT GGACGGCAAA 
CTCACCACCC GTGCCGATGT AACGAAACAT GAAGGAGATT TTCGCAAGAT AGTGGAAGGG 
GTCAATGCGA CAATTACCAG GCTGGTAGGT CTGCTTGATA ACATGCCGGC TCCTGCCATG 
ATCATCGATA ACGATTATAC CGTGTTGTAT ATGAATGAAC TGGGCGCCAA GGTAGGCGGG 
AAGACTCCGA CCCAGGTGGT TGGTACGAAA TGCTACGATC ATTTCAAGAC ATCAGACTGC 
AAGACCCAGA ACTGCGCCTG TGGCAGGGCC ATCCAGAGCG GGCAGGTGGC GCACGGCGAA 
ACCGATGCCC ATCCCGCGGT CGGGGTCGAT CTCGACATAG CCTATAGCGG CATGCCGTTG 
CGCAATGAAG CGGGCCAGGT AATCGGCGCC TTCGAAGTTG TGTCGGACCA GACTGCGATT 
AAGGCGTCGG CCCGGCTTGC CAAAAAGATC GCCGACTATC AGGAAAATGA AACCAGAAAA 
CTTGTGAATG GCCTGGGCAA ACTGGCGCAA GGCGATGTCA ACTTTACCAT CGTCACCGAG 
CCGGCCGATG ATGATACCAG GGAAGTATAT GCGACCTTCG AGTCAATCGC CGACGCATTA 
AACTCCTGCG TCAAGGTGGT CAATACCCTC AGCGCCGATG CCACCATGCT TTCCCAGGCG 
GCAATGGAGG GGCGGTTGAA CACCCGCGCC GACGCTGACA AGCACCGGGG AGCGTATCGC 
GACATAGTCC AGGGGGTTAA CGATACGATA GCCAGGCTGG TCGGGTTCCT GGACAGCATG 
CCCAGTCCGG CCATGATCGT CGATAACGAT TTCACGGTTC TCTACATGAA CGAACTGGGG 
GCAAAGGTCG GGGGGAAGGT GCCGGCCCAG GTGGCCGGGA CGAAATGCTA CGACCACTTC 
AAGACAAGCG ACTGTAAGAC CCAGAACTGT GCCTGCTACC AGGCCATCTC CGGCGGCCGT 
GAGGCAACGA GCGAGGCTGA TGCCCATCCC GCGGTTGGGC TTGATCTTGA CATCTCATAT 
ACCGGCGTGC CGATCAAGGA CGGGAGCGGC AAGGTGATCG GCGCCTTCGA GGTGGTGACG 
GACCTGACCG CGGTGAAGAA GGCGGCCCGG TTGGCCAGTA AAATTGCCGA CTACCAGGAG 
AATGAAACCA CCAAACTCGT GGCTGGTTTG GGGCGGCTGG CGAAAGGTGA TGTCAACTTT 
ACCCTCGCAA CCGAGCCTTG CGACAATGAT ACCAAGGAAG TCAAACAGAC CTTCGAGGCA 
ATAGCCGCTG CTGTCAATAG CTCTGTTCAG GCGACCCGGA GTATCTCTGA GGCAGCTAAA 
CTGATTGCCA ACGGCGACCT TACGGTTGAG ATAAAGGAAC GTTCTGCAGA AGACGAGCTG 
ATGCTTGCCT TGCATGCCAT GGTTAAAAAG CTGAACGACG TGGTCAGCGA GGTAAAATCG 
GCTGCCGACA ATGTGGCTGC CGGGAGCCAG GAACTTTCCT CCAGCTCCGA ACAGATGTCC 
CAAGGGGCGA GTGAGCAGGC GGCGGCAGCC GAAGAGGCAT CTTCCTCCAT GGAGCAGATG 
TCGTCCAATA TCAAACAGAC CGCCGACAAC GCGTTACAGA CGGAAAAGAT TGCCGTCAAA 
TCCGCTATCG ACGCCCAGGA AGGTGGGAAG GCAGTGGTCC AGACGGTGGC TGCCATGAAG 
GAGATTGCCG GCAAGATCTC CATCATCGAA GAGATCGCCC GGCAGACCAA CCTCCTCGCC 
CTGAACGCGG CCATAGAGGC GGCACGGGCC GGCGAGCACG GCAAAGGGTT TGCGGTGGTG 
GCAAGCGAGG TGCGGAAGCT TGCCGAACGG AGCCAGAAGG CGGCCGCGGA AATCTCCGAA 
CTCTCTTCCA CCAGCGTGGA GATAGCGGAG AAGGCTGGCG AGATGCTGAC CAGGATGGTC 
CCCGACATCC AGAAAACCGC TGAACTGGTG CAGGAGATCA GCGCCGGCAG CAAGGAGCAG 
GATGCCGGCG CCGAGCAGAT CAACAAGGCA ATCCAGCAAC TGGATCAGGT GATCCAGCAG 
AATGCCGGCG CCTCCGAGGA AATGGCATCC ACCGCAGAAG AGCTCGCTTC GCAGGCCGAA 
CAGTTGCAGT GCAGCATCGC CTTCTTCAAA ATCGGAGAAG AATCGGTCGG GAGAAAAACA 
GCGGTTGTGA AGAAAGACGA CCGCAAACCC GCCGTCAAGT CAAAGGTAAA AGACACCATG 
AAGCACGCCA TGGCGAACGG CTATGCGAAA AAGGCGGTCG GTCATGACCT GGACATGAAC 
GAGGACAGTG AGCAATTGGA TAACGAGTAT GAGAAATTCT AA 

 

Protein sequence

MSILRFKDWN IAAKVMSISL VTVLLISAVN FFYLLPDVEK KVLGERESTL KSVVALPVGL 
IAEYEERAKK GEFTLEEAQK RAKARIKQLR YGGNEYFWIN DLNAKIIMHP IKPELDGQDQ 
SGMKDPEGKA VFVEFVNVSK AKGEGFVKYL WPKPGTTAAV QKISYVKLYQ PWGWIVGSGL 
YVDDMQKEMA ALRWKIAVTT LLIVGVVLLL AYVISSRISR SIKKLMSAAD ELALGDVEVM 
ITSDSGDETG KLAHSFNKMV TNIKEAARVA ERIAVGDLEV EFTIKSDKDV LSRNLKTTVD 
AVKSMVGDAN MLAKAAVDGK LTTRADVTKH EGDFRKIVEG VNATITRLVG LLDNMPAPAM 
IIDNDYTVLY MNELGAKVGG KTPTQVVGTK CYDHFKTSDC KTQNCACGRA IQSGQVAHGE 
TDAHPAVGVD LDIAYSGMPL RNEAGQVIGA FEVVSDQTAI KASARLAKKI ADYQENETRK 
LVNGLGKLAQ GDVNFTIVTE PADDDTREVY ATFESIADAL NSCVKVVNTL SADATMLSQA 
AMEGRLNTRA DADKHRGAYR DIVQGVNDTI ARLVGFLDSM PSPAMIVDND FTVLYMNELG 
AKVGGKVPAQ VAGTKCYDHF KTSDCKTQNC ACYQAISGGR EATSEADAHP AVGLDLDISY 
TGVPIKDGSG KVIGAFEVVT DLTAVKKAAR LASKIADYQE NETTKLVAGL GRLAKGDVNF 
TLATEPCDND TKEVKQTFEA IAAAVNSSVQ ATRSISEAAK LIANGDLTVE IKERSAEDEL 
MLALHAMVKK LNDVVSEVKS AADNVAAGSQ ELSSSSEQMS QGASEQAAAA EEASSSMEQM 
SSNIKQTADN ALQTEKIAVK SAIDAQEGGK AVVQTVAAMK EIAGKISIIE EIARQTNLLA 
LNAAIEAARA GEHGKGFAVV ASEVRKLAER SQKAAAEISE LSSTSVEIAE KAGEMLTRMV 
PDIQKTAELV QEISAGSKEQ DAGAEQINKA IQQLDQVIQQ NAGASEEMAS TAEELASQAE 
QLQCSIAFFK IGEESVGRKT AVVKKDDRKP AVKSKVKDTM KHAMANGYAK KAVGHDLDMN 
EDSEQLDNEY EKF