| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3560 |
|---|
| Symbol | |
|---|
| ID | 8014421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 3595370 |
|---|
| End bp | 3597292 |
|---|
| Gene Length | 1923 bp |
|---|
| Protein Length | 640 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644826125 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_002977345 |
|---|
| Protein GI | 241206249 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.521589 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.347271 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTCA CCATTAAACT CAAACTGGGT CTTGCCTTTG GCATCATGAC GCTGCTGCTG
ATCGGCATCG CGGTTTATGG AAGCCTGAGC CTCGGCACCT TGAACGAGGC GAGCGGCAAG
ATGATCGACG GCTCTGTGCG CCGCCTGGAA CTGGCGCTGA ACGCCAATAT TGCCGAAGTC
AACGCCATCC GCGCTCAGAA GAACGCTCTG CTTTCCACCG ATCCTGACGC GGCTGCCGGC
TTCTACAAGG AAGCCGACCA GAATTTGCAG GTCATGTTCG ATGCCGTCGA TGCCGGCCTT
GCGATCGCCT TGCCGGAAGG CAAACCCCAT TGGGAGAAGC TGCGGACGGT CGGCGGGAAA
TTCCGTGAAA AATCCGCCGA GCTGCAGCAG CTTGACGCCA AGGGCGACAA GGCCGGCGCG
CTGGCGCTTT CACTCGGCGA CCTCCGGGCG ATGACCGGCG ACATGGGCGA TGCGATCTCC
GCCCTTACCG AGATCCAGCG CAAGGGCATG CAGGCGACCA ACCAATCGAA CACCAATCTC
TACACCTCAA CGAAGCTGAT CCTCACCACT GCTTCCGGCA TCGCAGTGCT CATCGCGCTC
GGTGCTGCGC TCTGGATCAC GCTTGGAATC AACAATGGCT TGAGGAAGAT CACGACCGTC
GTAAACGCCG TCGCAATCGG CGATCTCAAC CAGAAGGTCG ATGTCAAGAC CAATGACGAG
ATCAAGGATC TCATCAATAC GGTCAATGCC ATGACTGCCA ATCTGCGTGC CACGGCAGCA
CTTGCCGACC AGATCGCCAT GGGTGACCTC AGCACCGATG CCAAGCCGCT TTCGGACAAG
GATGCGCTCG GCATCGCGAT GCAGAGCATG ATCTCCAACC TGCGGACCAC CGCCGGCATC
GCCGATCAGA TCGCAAACGG TGACCTGACG GTGTCTCCAA AGCCGCTCTC CGACAAGGAT
GCGCTGGGCA TCGCGCTCGA ACAGATGGTC GAACGCCTGC GCGGCGTCGT TGCCGATGCG
ATATCGGCCG CCGAGAACGT CTCTTCCGGC AGCCAGGAAC TTTCGGCAAG CTCCGAGCAG
GTGTCGCAGG GCGCCACGGA GCAGGCGGCT TCCGCCGAAG AGGCTTCCGC CTCGATGGAA
GAGATGGCCT CCAACATCAA GCAGAACGCC GACAATGCCG CCCAGACCGA AAAGATCGCC
CGTCAGTCGG CGAAGGATGC GGAAGCCAGC GGCGAGGCTG TCTCCCGCGC TGTCGACGCG
ATGCGCACGA TTGCCCAGAA GATCGGCATC GTCCAGGAAA TCGCCCGCCA GACCGATCTT
CTCGCCCTCA ACGCTGCCGT GGAAGCGGCT CGTGCGGGTG AGCACGGCAA GGGTTTCGCA
GTCGTTGCAT CCGAAGTGCG CAAGCTTGCT GAACGCAGCC AGTCGGCTGC CGCCGAGATC
AGCTCGATGT CGAGCGATAC GGTGACGGCG GCCCAGGAAG CGGGCGAAAT GCTCGGCCGG
CTGGTGCCCG ATATCCGCAA GACGGCCGAG CTGGTTTCCG AGATCAGTGC CGCCTGCCGC
GAACAGGATA TCGGGGCGGC CCAGATCAAC GAGGCGATCC AGCAGCTCGA CAAGGTGACG
CAGCAGAATG CCGGCGCCTC CGAGCAGATG TCGGCAACCT CGGAGGAACT CGCCTCCCAG
GCTGAAGAGC TGCAGACGTC GATTGCCTTC TTCAGGGTCG ACATGGCAGG CGGTCGCCGC
GAGCGTGCGC CGGCTGCAAA ACTCACCGTC CGCAACCGGC CTCCCGCCGC ACCTCGCAAA
CCGGCTGGCA AGGCGCCGGC CAATACGGTG GCCGGCCAGC AGGCCCGCGT GAAGGGTTTT
GCCCTCGACA TGTCGATGGG CGGTCCCGAC ACGGTCGACG AGGAATTCCG GGAGAGCGCA
TAG
|
|---|
| Protein sequence | MRFTIKLKLG LAFGIMTLLL IGIAVYGSLS LGTLNEASGK MIDGSVRRLE LALNANIAEV
NAIRAQKNAL LSTDPDAAAG FYKEADQNLQ VMFDAVDAGL AIALPEGKPH WEKLRTVGGK
FREKSAELQQ LDAKGDKAGA LALSLGDLRA MTGDMGDAIS ALTEIQRKGM QATNQSNTNL
YTSTKLILTT ASGIAVLIAL GAALWITLGI NNGLRKITTV VNAVAIGDLN QKVDVKTNDE
IKDLINTVNA MTANLRATAA LADQIAMGDL STDAKPLSDK DALGIAMQSM ISNLRTTAGI
ADQIANGDLT VSPKPLSDKD ALGIALEQMV ERLRGVVADA ISAAENVSSG SQELSASSEQ
VSQGATEQAA SAEEASASME EMASNIKQNA DNAAQTEKIA RQSAKDAEAS GEAVSRAVDA
MRTIAQKIGI VQEIARQTDL LALNAAVEAA RAGEHGKGFA VVASEVRKLA ERSQSAAAEI
SSMSSDTVTA AQEAGEMLGR LVPDIRKTAE LVSEISAACR EQDIGAAQIN EAIQQLDKVT
QQNAGASEQM SATSEELASQ AEELQTSIAF FRVDMAGGRR ERAPAAKLTV RNRPPAAPRK
PAGKAPANTV AGQQARVKGF ALDMSMGGPD TVDEEFRESA
|
|---|
| |