More than 300 homologs were found in PanDaTox collection
for query gene Rsph17025_1046 on replicon NC_009428
Organism: Rhodobacter sphaeroides ATCC 17025



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009428  Rsph17025_1046  methyl-accepting chemotaxis sensory transducer  100 
 
 
551 aa  1078    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3251  hypothetical protein  52.34 
 
 
552 aa  483  1e-135  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.367816  normal  0.217501 
 
 
-
 
NC_007494  RSP_3708  methyl accepting chemotaxis protein  54.95 
 
 
553 aa  480  1e-134  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3443  methyl-accepting chemotaxis sensory transducer  54.95 
 
 
553 aa  476  1e-133  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0628443 
 
 
-
 
NC_009431  Rsph17025_4246  hypothetical protein  48.76 
 
 
562 aa  429  1e-119  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.2464  normal  0.120296 
 
 
-
 
NC_009050  Rsph17029_4036  methyl-accepting chemotaxis sensory transducer  47.4 
 
 
534 aa  424  1e-117  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3303  putative methyl accepting chemotaxis protein, McpG  47.4 
 
 
534 aa  422  1e-117  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.627808  n/a   
 
 
-
 
NC_009429  Rsph17025_3299  hypothetical protein  48.92 
 
 
547 aa  425  1e-117  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.530599  normal  0.4786 
 
 
-
 
NC_007494  RSP_3083  methyl accepting chemotaxis protein  49.01 
 
 
561 aa  422  1e-116  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.481742  n/a   
 
 
-
 
NC_009429  Rsph17025_3891  hypothetical protein  49.01 
 
 
551 aa  422  1e-116  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.452082 
 
 
-
 
NC_009050  Rsph17029_3810  methyl-accepting chemotaxis sensory transducer  49.01 
 
 
561 aa  421  1e-116  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.296432 
 
 
-
 
NC_007643  Rru_A1401  chemotaxis sensory transducer  46.53 
 
 
569 aa  393  1e-108  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0614  methyl-accepting chemotaxis sensory transducer  45.5 
 
 
560 aa  380  1e-104  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_4314  methyl-accepting chemotaxis protein  45.52 
 
 
564 aa  371  1e-101  Agrobacterium vitis S4  Bacteria  normal  0.77703  n/a   
 
 
-
 
NC_007643  Rru_A1404  chemotaxis sensory transducer  42.07 
 
 
611 aa  368  1e-100  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.011031  n/a   
 
 
-
 
NC_007494  RSP_3108  putative methyl accepting chemotaxis protein  48.33 
 
 
562 aa  365  1e-99  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007494  RSP_3432  methyl-accepting chemotaxis protein  48.9 
 
 
519 aa  363  3e-99  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0745866  n/a   
 
 
-
 
NC_009050  Rsph17029_3077  methyl-accepting chemotaxis sensory transducer  48.9 
 
 
519 aa  363  3e-99  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.268982  normal  0.422774 
 
 
-
 
NC_009050  Rsph17029_3837  methyl-accepting chemotaxis sensory transducer  47.46 
 
 
562 aa  360  3e-98  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3682  hypothetical protein  46.67 
 
 
519 aa  356  6.999999999999999e-97  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.552968 
 
 
-
 
NC_007493  RSP_2442  methyl accepting chemotaxis protein, McpB  42.98 
 
 
560 aa  353  5.9999999999999994e-96  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.648609  n/a   
 
 
-
 
NC_009049  Rsph17029_1106  methyl-accepting chemotaxis sensory transducer  42.98 
 
 
560 aa  353  5.9999999999999994e-96  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.809659 
 
 
-
 
NC_011369  Rleg2_3262  methyl-accepting chemotaxis sensory transducer  44.31 
 
 
569 aa  352  1e-95  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.846629 
 
 
-
 
NC_012850  Rleg_3561  methyl-accepting chemotaxis sensory transducer  43.72 
 
 
569 aa  350  3e-95  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.216373 
 
 
-
 
NC_010510  Mrad2831_5777  methyl-accepting chemotaxis sensory transducer  60.82 
 
 
705 aa  348  2e-94  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.807181  normal  0.137814 
 
 
-
 
NC_013173  Dbac_2647  methyl-accepting chemotaxis sensory transducer  40.18 
 
 
554 aa  331  2e-89  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.910941  n/a   
 
 
-
 
NC_012850  Rleg_3559  methyl-accepting chemotaxis sensory transducer  41.45 
 
 
602 aa  329  1.0000000000000001e-88  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.495549  normal  0.432808 
 
 
-
 
NC_009483  Gura_2985  methyl-accepting chemotaxis sensory transducer  40.32 
 
 
576 aa  328  2.0000000000000001e-88  Geobacter uraniireducens Rf4  Bacteria  normal  0.293775  n/a   
 
 
-
 
NC_009485  BBta_6735  methyl-accepting chemotaxis receptor (MCP)  44.16 
 
 
566 aa  324  2e-87  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0787905  normal 
 
 
-
 
NC_009431  Rsph17025_4277  hypothetical protein  44.47 
 
 
555 aa  318  2e-85  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.280884  normal 
 
 
-
 
NC_013173  Dbac_1917  methyl-accepting chemotaxis sensory transducer  52.32 
 
 
677 aa  317  3e-85  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.134066  n/a   
 
 
-
 
NC_007925  RPC_4671  methyl-accepting chemotaxis sensory transducer  52.13 
 
 
691 aa  315  1.9999999999999998e-84  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4672  methyl-accepting chemotaxis sensory transducer  50.79 
 
 
693 aa  314  1.9999999999999998e-84  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6733  putative methyl-accepting chemotaxis protein  47.65 
 
 
738 aa  313  4.999999999999999e-84  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.556647  normal 
 
 
-
 
NC_011369  Rleg2_3260  methyl-accepting chemotaxis sensory transducer  40.97 
 
 
602 aa  313  5.999999999999999e-84  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0582253  normal  0.204929 
 
 
-
 
NC_013173  Dbac_1421  methyl-accepting chemotaxis sensory transducer  51.36 
 
 
676 aa  312  1e-83  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.45919  n/a   
 
 
-
 
NC_012918  GM21_1105  methyl-accepting chemotaxis sensory transducer  39.01 
 
 
563 aa  311  2e-83  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009428  Rsph17025_1788  methyl-accepting chemotaxis sensory transducer  41.27 
 
 
544 aa  308  1.0000000000000001e-82  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_4312  methyl-accepting chemotaxis protein  39.2 
 
 
606 aa  308  2.0000000000000002e-82  Agrobacterium vitis S4  Bacteria  normal  0.623028  n/a   
 
 
-
 
NC_009483  Gura_2779  methyl-accepting chemotaxis sensory transducer  39.47 
 
 
566 aa  308  2.0000000000000002e-82  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1300  methyl-accepting chemotaxis protein  39.89 
 
 
563 aa  306  6e-82  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1608  methyl-accepting chemotaxis sensory transducer  47 
 
 
558 aa  305  1.0000000000000001e-81  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0950  methyl-accepting chemotaxis sensory transducer  52.3 
 
 
546 aa  305  2.0000000000000002e-81  Geobacter sp. M21  Bacteria  n/a    normal  0.187483 
 
 
-
 
NC_010338  Caul_0615  methyl-accepting chemotaxis sensory transducer  41.12 
 
 
599 aa  305  2.0000000000000002e-81  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4817  methyl-accepting chemotaxis sensory transducer  53.73 
 
 
747 aa  304  3.0000000000000004e-81  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.00849638 
 
 
-
 
NC_002939  GSU1304  methyl-accepting chemotaxis protein  48.82 
 
 
566 aa  301  2e-80  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1403  methyl-accepting chemotaxis sensory transducer  57.18 
 
 
637 aa  301  2e-80  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_7837  putative methyl-accepting chemotaxis protein (MCP)  52.16 
 
 
702 aa  301  2e-80  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4674  methyl-accepting chemotaxis sensory transducer  48.26 
 
 
734 aa  301  3e-80  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0902  methyl-accepting chemotaxis sensory transducer  37.22 
 
 
550 aa  297  4e-79  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1601  methyl-accepting chemotaxis sensory transducer  51.78 
 
 
1500 aa  296  7e-79  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2542  methyl-accepting chemotaxis sensory transducer  50.3 
 
 
597 aa  295  1e-78  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_3297  methyl-accepting chemotaxis sensory transducer  50.66 
 
 
548 aa  294  3e-78  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4673  methyl-accepting chemotaxis sensory transducer  36.7 
 
 
640 aa  293  7e-78  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3560  methyl-accepting chemotaxis sensory transducer  53.06 
 
 
640 aa  292  1e-77  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.521589  normal  0.347271 
 
 
-
 
NC_011369  Rleg2_3261  methyl-accepting chemotaxis sensory transducer  53.06 
 
 
640 aa  291  2e-77  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.444549 
 
 
-
 
NC_009485  BBta_7836  methyl-accepting chemotaxis receptor (MCP)  47.17 
 
 
609 aa  291  2e-77  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.518607  normal  0.95176 
 
 
-
 
NC_002939  GSU1303  methyl-accepting chemotaxis protein  52.9 
 
 
494 aa  291  3e-77  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0683  methyl-accepting chemotaxis protein, putative  38.68 
 
 
568 aa  289  1e-76  Geobacter sulfurreducens PCA  Bacteria  normal  0.268569  n/a   
 
 
-
 
NC_012918  GM21_0949  methyl-accepting chemotaxis sensory transducer  54.98 
 
 
554 aa  288  1e-76  Geobacter sp. M21  Bacteria  n/a    normal  0.0219131 
 
 
-
 
NC_007517  Gmet_2424  methyl-accepting chemotaxis sensory transducer  48.91 
 
 
581 aa  286  5e-76  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_1735  methyl-accepting chemotaxis sensory transducer  51.5 
 
 
868 aa  286  5.999999999999999e-76  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011981  Avi_7320  methyl-accepting chemotaxis protein  55 
 
 
774 aa  285  1.0000000000000001e-75  Agrobacterium vitis S4  Bacteria  normal  0.364364  n/a   
 
 
-
 
NC_011989  Avi_3947  methyl-accepting chemotaxis protein  52.99 
 
 
619 aa  286  1.0000000000000001e-75  Agrobacterium vitis S4  Bacteria  normal  0.412994  n/a   
 
 
-
 
NC_009439  Pmen_1567  methyl-accepting chemotaxis sensory transducer  37.79 
 
 
547 aa  286  1.0000000000000001e-75  Pseudomonas mendocina ymp  Bacteria  normal  0.0467505  normal 
 
 
-
 
NC_002939  GSU1298  methyl-accepting chemotaxis protein  48.01 
 
 
568 aa  283  4.0000000000000003e-75  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0142  methyl-accepting chemotaxis sensory transducer  45.55 
 
 
733 aa  283  4.0000000000000003e-75  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.134985  n/a   
 
 
-
 
NC_011146  Gbem_3298  methyl-accepting chemotaxis sensory transducer  55.99 
 
 
553 aa  280  5e-74  Geobacter bemidjiensis Bem  Bacteria  normal  0.62981  n/a   
 
 
-
 
NC_007517  Gmet_2422  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  53.12 
 
 
1046 aa  279  8e-74  Geobacter metallireducens GS-15  Bacteria  normal  0.925436  normal 
 
 
-
 
NC_002939  GSU1140  methyl-accepting chemotaxis protein  52.58 
 
 
727 aa  278  2e-73  Geobacter sulfurreducens PCA  Bacteria  normal  0.664897  n/a   
 
 
-
 
NC_009050  Rsph17029_3065  methyl-accepting chemotaxis sensory transducer  40.83 
 
 
524 aa  277  3e-73  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.60396 
 
 
-
 
NC_008576  Mmc1_2401  methyl-accepting chemotaxis sensory transducer  48.57 
 
 
674 aa  275  1.0000000000000001e-72  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.0000495749  normal  0.0928318 
 
 
-
 
NC_011146  Gbem_2945  methyl-accepting chemotaxis sensory transducer  51.47 
 
 
780 aa  275  2.0000000000000002e-72  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1294  methyl-accepting chemotaxis protein  58.93 
 
 
962 aa  274  3e-72  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2710  methyl-accepting chemotaxis sensory transducer  49.85 
 
 
969 aa  274  3e-72  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_0628  methyl-accepting chemotaxis sensory transducer  43.19 
 
 
675 aa  273  5.000000000000001e-72  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_1294  methyl-accepting chemotaxis sensory transducer  53.9 
 
 
686 aa  272  1e-71  Geobacter sp. M21  Bacteria  n/a    hitchhiker  4.66893e-19 
 
 
-
 
NC_011145  AnaeK_2477  methyl-accepting chemotaxis sensory transducer  38.08 
 
 
617 aa  272  1e-71  Anaeromyxobacter sp. K  Bacteria  normal  0.200364  n/a   
 
 
-
 
NC_009485  BBta_6734  methyl-accepting chemotaxis receptor (MCP)  51.97 
 
 
650 aa  271  2e-71  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.221073  normal 
 
 
-
 
NC_007760  Adeh_3897  methyl-accepting chemotaxis sensory transducer  47.88 
 
 
551 aa  271  2.9999999999999997e-71  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.198365  n/a   
 
 
-
 
NC_008576  Mmc1_3308  methyl-accepting chemotaxis sensory transducer  48.13 
 
 
682 aa  271  2.9999999999999997e-71  Magnetococcus sp. MC-1  Bacteria  normal  0.785168  normal 
 
 
-
 
NC_011891  A2cp1_2573  methyl-accepting chemotaxis sensory transducer  38.02 
 
 
621 aa  270  4e-71  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.650368  n/a   
 
 
-
 
NC_011146  Gbem_2944  methyl-accepting chemotaxis sensory transducer  50.15 
 
 
780 aa  270  5e-71  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1482  methyl-accepting chemotaxis sensory transducer  55.52 
 
 
735 aa  269  8e-71  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2772  methyl-accepting chemotaxis sensory transducer  54.87 
 
 
735 aa  269  1e-70  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007494  RSP_3420  methyl-accepting chemotaxis protein  40.63 
 
 
524 aa  269  1e-70  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1733  methyl-accepting chemotaxis sensory transducer  53.4 
 
 
823 aa  268  2e-70  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_4313  methyl-accepting chemotaxis protein  53.31 
 
 
642 aa  266  7e-70  Agrobacterium vitis S4  Bacteria  normal  0.7654  n/a   
 
 
-
 
NC_007519  Dde_1077  methyl-accepting chemotaxis sensory transducer  45.66 
 
 
690 aa  265  1e-69  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.317064  n/a   
 
 
-
 
NC_007760  Adeh_1380  methyl-accepting chemotaxis sensory transducer  53.77 
 
 
608 aa  265  1e-69  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.236828  n/a   
 
 
-
 
NC_009483  Gura_2989  methyl-accepting chemotaxis sensory transducer  51.18 
 
 
1093 aa  266  1e-69  Geobacter uraniireducens Rf4  Bacteria  normal  0.653084  n/a   
 
 
-
 
NC_011146  Gbem_2942  methyl-accepting chemotaxis sensory transducer  49.7 
 
 
1049 aa  265  2e-69  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1366  methyl-accepting chemotaxis sensory transducer with Cache sensor  54.72 
 
 
1088 aa  264  3e-69  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000517956 
 
 
-
 
NC_012918  GM21_1108  methyl-accepting chemotaxis sensory transducer  56.9 
 
 
685 aa  264  3e-69  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_1191  methyl-accepting chemotaxis sensory transducer  50.31 
 
 
846 aa  263  6.999999999999999e-69  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0912  methyl-accepting chemotaxis protein  35.69 
 
 
551 aa  262  1e-68  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2361  methyl-accepting chemotaxis sensory transducer  53.07 
 
 
652 aa  262  1e-68  Desulfovibrio vulgaris DP4  Bacteria  normal  0.128072  normal  0.188082 
 
 
-
 
NC_011662  Tmz1t_1318  methyl-accepting chemotaxis sensory transducer  37.48 
 
 
555 aa  260  4e-68  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1280  methyl-accepting chemotaxis sensory transducer  50.3 
 
 
1048 aa  260  4e-68  Geobacter sp. M21  Bacteria  n/a    normal  0.0818053 
 
 
-
 
NC_011145  AnaeK_3998  methyl-accepting chemotaxis sensory transducer  48.68 
 
 
550 aa  258  1e-67  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
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