Gene Rsph17025_3682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3682 
Symbol 
ID5085542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp575612 
End bp577171 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content69% 
IMG OID640485240 
Producthypothetical protein 
Protein accessionYP_001169855 
Protein GI146279697 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.552968 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTAA CGATTAGAAG CAAGCTGGTC ATGGCCTTCG CCGTGGTCTT CGTCATGTCC 
GGCCTGGCGG TCGCCATTTC CCTCTTTCAT CTCCAGCGAC TCGACGCCCG GATGACCCAG
GTCATCAACG AGAATGTCCA TCAGGTCGTC CTCGCGCAGC GGCTGAGCAT CGGCCAGTAT
CGCGTCATGG CCAGCATCCG CGCGCACTTG CTCGACCGCG ACGCCGATTC GGCCTTCCGC
ATCGAGACGA GCGTTCAGGA AGGACGGATG GTCCAGCGCC GCGCCCTGCG CGAATTGCGC
GACAGCGCCG CGGATGAGAC CAGCCGCGAC ATCGTCGTGC GCTACAACGA CCTGCGCAAG
CAGATCCAGC GCATCAACAA CCGGGCGATG ATCTTCTCGC TCGGCGGAAA CCCCGAGGGT
GCGGCCAGCT ACCTGCGCGA CAACGGGGCC AGCGATCTGG AACGGTCGCT CGAGACTCTC
TCGGAGGAAC TGGTGGCGCA CAAGCTCGCG GTCCTGGAGC GCGTGAAGGC CGAATCGGAA
AAGGACGTGC GCGGCACCTT CGCGCTCGTG ATGCTGATCG CCGCTCTGGC CGGGGTTCTG
GGTTCCGCCG CCGCGCTCTG GATCACCCTT TCGATCGGCC GCGGGCTCCG CCGGGCGCTG
GCCCTGACAC AGCGGGTCGC ACAGGGCGAC CTGTCGCGAG GCGAGGAGGT CCGGGGCCGC
GACGAGATCG CCGACCTTCT CGGGGCGAGC AACAGCATGC TTCTCAAGCT GCGGGAGGTG
GTCGAGGAAG TTGGCGGCAC CGCACGCGAC GTGGCCGCCG CAAGCGGCCG GATGGCCTCG
GCCTCGGGCC AGCTGAAGTC CGGCACAGAA GAACAGGCGG CGGCAACGGT CGAAGCCTCG
GCCGCGGTCG AGCAGATGGT GGGCAACATC ACCCAGTCCG AGGAGAATGC GGGCATGACG
GCCCGCATCG CCAGCAGTTC CACCGATGAC GCCCGCCGCT GCGGCGAGGC GGTTGCGGAC
GCCGTGCGCT CGATGCAGGA GATCGCCGAG CGGATCGGGA TCGTCGGCGA AATCGCCCGC
CAGACCGATC TTCTTGCCCT CAACGCCGCC GTCGAGGCCG CGCGGGCCGG CGAACAGGGT
CGCGGCTTTG CGGTCGTCGC CGCCGAAGTG CGCCGACTTG CCGAACGCAG CGCCGAAGCG
GCGGCCGAGA TCTCGACGCG TTCGGCCGAA ACCGCGCGGG CCGCGGCCGG CGCGGGCGAG
ATGATCGACC GACTGGTCCC CGAGATCGAG CGCACCTCCA ATCTCGTGAC GGACATCTCG
GTGGCCTCGC GCGAACTGTC CGAAGGGGCG CGGCAGGTCT CGCTCGCCAT CGATGCGCTG
GATCGGGTGA CGCAGCAGAC CGAGGCCGCG TCGCGCCTGC TGGATGAGGA TGCCGACGAA
CTCGCCACAC GGGCGCGCCG CCTGTTGACC AGCGTCAACT ATTTCCGCAC CGGCACCGAG
GCTCTGGCCG CGGAGGACGA TCTGGCCCCT GCCCCGCAGC CGCTGAGGGC GGTGGCCTGA
 
Protein sequence
MKVTIRSKLV MAFAVVFVMS GLAVAISLFH LQRLDARMTQ VINENVHQVV LAQRLSIGQY 
RVMASIRAHL LDRDADSAFR IETSVQEGRM VQRRALRELR DSAADETSRD IVVRYNDLRK
QIQRINNRAM IFSLGGNPEG AASYLRDNGA SDLERSLETL SEELVAHKLA VLERVKAESE
KDVRGTFALV MLIAALAGVL GSAAALWITL SIGRGLRRAL ALTQRVAQGD LSRGEEVRGR
DEIADLLGAS NSMLLKLREV VEEVGGTARD VAAASGRMAS ASGQLKSGTE EQAAATVEAS
AAVEQMVGNI TQSEENAGMT ARIASSSTDD ARRCGEAVAD AVRSMQEIAE RIGIVGEIAR
QTDLLALNAA VEAARAGEQG RGFAVVAAEV RRLAERSAEA AAEISTRSAE TARAAAGAGE
MIDRLVPEIE RTSNLVTDIS VASRELSEGA RQVSLAIDAL DRVTQQTEAA SRLLDEDADE
LATRARRLLT SVNYFRTGTE ALAAEDDLAP APQPLRAVA