More than 300 homologs were found in PanDaTox collection
for query gene Rsph17025_3299 on replicon NC_009429
Organism: Rhodobacter sphaeroides ATCC 17025



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007494  RSP_3303  putative methyl accepting chemotaxis protein, McpG  72.39 
 
 
534 aa  723    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.627808  n/a   
 
 
-
 
NC_009050  Rsph17029_4036  methyl-accepting chemotaxis sensory transducer  72.76 
 
 
534 aa  728    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3299  hypothetical protein  100 
 
 
547 aa  1083    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.530599  normal  0.4786 
 
 
-
 
NC_009428  Rsph17025_1046  methyl-accepting chemotaxis sensory transducer  49.82 
 
 
551 aa  459  9.999999999999999e-129  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3251  hypothetical protein  49.64 
 
 
552 aa  444  1e-123  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.367816  normal  0.217501 
 
 
-
 
NC_007494  RSP_3708  methyl accepting chemotaxis protein  49.7 
 
 
553 aa  418  9.999999999999999e-116  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3443  methyl-accepting chemotaxis sensory transducer  49.8 
 
 
553 aa  416  9.999999999999999e-116  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0628443 
 
 
-
 
NC_007494  RSP_3083  methyl accepting chemotaxis protein  47.14 
 
 
561 aa  411  1e-113  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.481742  n/a   
 
 
-
 
NC_009429  Rsph17025_3891  hypothetical protein  46.59 
 
 
551 aa  409  1e-113  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.452082 
 
 
-
 
NC_009050  Rsph17029_3810  methyl-accepting chemotaxis sensory transducer  46.79 
 
 
561 aa  407  1.0000000000000001e-112  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.296432 
 
 
-
 
NC_009431  Rsph17025_4246  hypothetical protein  47.1 
 
 
562 aa  380  1e-104  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.2464  normal  0.120296 
 
 
-
 
NC_007493  RSP_2442  methyl accepting chemotaxis protein, McpB  45.07 
 
 
560 aa  370  1e-101  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.648609  n/a   
 
 
-
 
NC_009049  Rsph17029_1106  methyl-accepting chemotaxis sensory transducer  45.07 
 
 
560 aa  370  1e-101  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.809659 
 
 
-
 
NC_007643  Rru_A1401  chemotaxis sensory transducer  42.99 
 
 
569 aa  339  8e-92  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_1788  methyl-accepting chemotaxis sensory transducer  41.79 
 
 
544 aa  335  2e-90  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0614  methyl-accepting chemotaxis sensory transducer  40.98 
 
 
560 aa  334  2e-90  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3432  methyl-accepting chemotaxis protein  46.23 
 
 
519 aa  334  3e-90  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0745866  n/a   
 
 
-
 
NC_009050  Rsph17029_3077  methyl-accepting chemotaxis sensory transducer  46.23 
 
 
519 aa  334  3e-90  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.268982  normal  0.422774 
 
 
-
 
NC_009429  Rsph17025_3682  hypothetical protein  45.09 
 
 
519 aa  324  2e-87  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.552968 
 
 
-
 
NC_011989  Avi_4314  methyl-accepting chemotaxis protein  43.77 
 
 
564 aa  321  1.9999999999999998e-86  Agrobacterium vitis S4  Bacteria  normal  0.77703  n/a   
 
 
-
 
NC_010510  Mrad2831_5777  methyl-accepting chemotaxis sensory transducer  55.62 
 
 
705 aa  319  7.999999999999999e-86  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.807181  normal  0.137814 
 
 
-
 
NC_012850  Rleg_3561  methyl-accepting chemotaxis sensory transducer  40.25 
 
 
569 aa  318  1e-85  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.216373 
 
 
-
 
NC_007494  RSP_3108  putative methyl accepting chemotaxis protein  44.21 
 
 
562 aa  315  9.999999999999999e-85  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3262  methyl-accepting chemotaxis sensory transducer  39.89 
 
 
569 aa  314  2.9999999999999996e-84  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.846629 
 
 
-
 
NC_007925  RPC_4671  methyl-accepting chemotaxis sensory transducer  51.59 
 
 
691 aa  313  5.999999999999999e-84  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4672  methyl-accepting chemotaxis sensory transducer  51.99 
 
 
693 aa  311  1e-83  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009050  Rsph17029_3837  methyl-accepting chemotaxis sensory transducer  44.21 
 
 
562 aa  312  1e-83  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009431  Rsph17025_4277  hypothetical protein  42.45 
 
 
555 aa  300  6e-80  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.280884  normal 
 
 
-
 
NC_007643  Rru_A1404  chemotaxis sensory transducer  37.64 
 
 
611 aa  298  1e-79  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.011031  n/a   
 
 
-
 
NC_009485  BBta_6735  methyl-accepting chemotaxis receptor (MCP)  41.6 
 
 
566 aa  293  7e-78  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0787905  normal 
 
 
-
 
NC_009485  BBta_7837  putative methyl-accepting chemotaxis protein (MCP)  50.77 
 
 
702 aa  291  2e-77  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2647  methyl-accepting chemotaxis sensory transducer  37.92 
 
 
554 aa  290  5.0000000000000004e-77  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.910941  n/a   
 
 
-
 
NC_012850  Rleg_3559  methyl-accepting chemotaxis sensory transducer  40 
 
 
602 aa  290  7e-77  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.495549  normal  0.432808 
 
 
-
 
NC_010505  Mrad2831_4817  methyl-accepting chemotaxis sensory transducer  46.87 
 
 
747 aa  289  8e-77  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.00849638 
 
 
-
 
NC_013173  Dbac_1917  methyl-accepting chemotaxis sensory transducer  47.38 
 
 
677 aa  281  2e-74  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.134066  n/a   
 
 
-
 
NC_011989  Avi_4312  methyl-accepting chemotaxis protein  38.95 
 
 
606 aa  281  2e-74  Agrobacterium vitis S4  Bacteria  normal  0.623028  n/a   
 
 
-
 
NC_009485  BBta_7836  methyl-accepting chemotaxis receptor (MCP)  38.9 
 
 
609 aa  280  4e-74  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.518607  normal  0.95176 
 
 
-
 
NC_002939  GSU1304  methyl-accepting chemotaxis protein  44.79 
 
 
566 aa  279  1e-73  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0615  methyl-accepting chemotaxis sensory transducer  38.58 
 
 
599 aa  278  2e-73  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6733  putative methyl-accepting chemotaxis protein  45.82 
 
 
738 aa  277  4e-73  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.556647  normal 
 
 
-
 
NC_013173  Dbac_1421  methyl-accepting chemotaxis sensory transducer  41.93 
 
 
676 aa  276  6e-73  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.45919  n/a   
 
 
-
 
NC_009483  Gura_2779  methyl-accepting chemotaxis sensory transducer  42.07 
 
 
566 aa  276  6e-73  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4674  methyl-accepting chemotaxis sensory transducer  46.27 
 
 
734 aa  274  2.0000000000000002e-72  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_0950  methyl-accepting chemotaxis sensory transducer  47.24 
 
 
546 aa  273  4.0000000000000004e-72  Geobacter sp. M21  Bacteria  n/a    normal  0.187483 
 
 
-
 
NC_008576  Mmc1_0628  methyl-accepting chemotaxis sensory transducer  44.44 
 
 
675 aa  271  2e-71  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_3260  methyl-accepting chemotaxis sensory transducer  39.34 
 
 
602 aa  270  5.9999999999999995e-71  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0582253  normal  0.204929 
 
 
-
 
NC_012918  GM21_1105  methyl-accepting chemotaxis sensory transducer  45.82 
 
 
563 aa  269  8e-71  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_3297  methyl-accepting chemotaxis sensory transducer  47.18 
 
 
548 aa  268  2e-70  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2542  methyl-accepting chemotaxis sensory transducer  44.56 
 
 
597 aa  268  2e-70  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011989  Avi_3947  methyl-accepting chemotaxis protein  49.58 
 
 
619 aa  267  4e-70  Agrobacterium vitis S4  Bacteria  normal  0.412994  n/a   
 
 
-
 
NC_012850  Rleg_3560  methyl-accepting chemotaxis sensory transducer  50.74 
 
 
640 aa  266  5.999999999999999e-70  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.521589  normal  0.347271 
 
 
-
 
NC_011369  Rleg2_3261  methyl-accepting chemotaxis sensory transducer  51.31 
 
 
640 aa  266  7e-70  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.444549 
 
 
-
 
NC_012918  GM21_0949  methyl-accepting chemotaxis sensory transducer  47.13 
 
 
554 aa  266  8.999999999999999e-70  Geobacter sp. M21  Bacteria  n/a    normal  0.0219131 
 
 
-
 
NC_008609  Ppro_1608  methyl-accepting chemotaxis sensory transducer  39.16 
 
 
558 aa  265  2e-69  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1403  methyl-accepting chemotaxis sensory transducer  50.43 
 
 
637 aa  263  4e-69  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2985  methyl-accepting chemotaxis sensory transducer  37.84 
 
 
576 aa  263  8e-69  Geobacter uraniireducens Rf4  Bacteria  normal  0.293775  n/a   
 
 
-
 
NC_007760  Adeh_1160  methyl-accepting chemotaxis sensory transducer  37.55 
 
 
532 aa  262  1e-68  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1300  methyl-accepting chemotaxis protein  46.36 
 
 
563 aa  261  2e-68  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1294  methyl-accepting chemotaxis sensory transducer  51.16 
 
 
686 aa  261  3e-68  Geobacter sp. M21  Bacteria  n/a    hitchhiker  4.66893e-19 
 
 
-
 
NC_007925  RPC_4673  methyl-accepting chemotaxis sensory transducer  37.02 
 
 
640 aa  261  3e-68  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1303  methyl-accepting chemotaxis protein  45.48 
 
 
494 aa  259  1e-67  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3297  chemotaxis sensory transducer  45.48 
 
 
543 aa  257  3e-67  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0142  methyl-accepting chemotaxis sensory transducer  48.39 
 
 
733 aa  257  3e-67  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.134985  n/a   
 
 
-
 
NC_002939  GSU0683  methyl-accepting chemotaxis protein, putative  36.24 
 
 
568 aa  256  6e-67  Geobacter sulfurreducens PCA  Bacteria  normal  0.268569  n/a   
 
 
-
 
NC_004578  PSPTO_0912  methyl-accepting chemotaxis protein  34.53 
 
 
551 aa  256  6e-67  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0902  methyl-accepting chemotaxis sensory transducer  33.71 
 
 
550 aa  256  7e-67  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1298  methyl-accepting chemotaxis protein  41.32 
 
 
568 aa  256  1.0000000000000001e-66  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1318  methyl-accepting chemotaxis sensory transducer  38.87 
 
 
555 aa  256  1.0000000000000001e-66  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1482  methyl-accepting chemotaxis sensory transducer  49.4 
 
 
735 aa  254  2.0000000000000002e-66  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2772  methyl-accepting chemotaxis sensory transducer  49.4 
 
 
735 aa  254  2.0000000000000002e-66  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007517  Gmet_2422  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.2 
 
 
1046 aa  254  3e-66  Geobacter metallireducens GS-15  Bacteria  normal  0.925436  normal 
 
 
-
 
NC_011146  Gbem_3298  methyl-accepting chemotaxis sensory transducer  51.16 
 
 
553 aa  254  4.0000000000000004e-66  Geobacter bemidjiensis Bem  Bacteria  normal  0.62981  n/a   
 
 
-
 
NC_008576  Mmc1_2401  methyl-accepting chemotaxis sensory transducer  47.54 
 
 
674 aa  253  5.000000000000001e-66  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.0000495749  normal  0.0928318 
 
 
-
 
NC_008609  Ppro_1601  methyl-accepting chemotaxis sensory transducer  46.15 
 
 
1500 aa  253  9.000000000000001e-66  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6734  methyl-accepting chemotaxis receptor (MCP)  48.53 
 
 
650 aa  252  1e-65  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.221073  normal 
 
 
-
 
NC_011981  Avi_7320  methyl-accepting chemotaxis protein  58.48 
 
 
774 aa  251  2e-65  Agrobacterium vitis S4  Bacteria  normal  0.364364  n/a   
 
 
-
 
NC_011769  DvMF_0621  methyl-accepting chemotaxis sensory transducer  51.35 
 
 
727 aa  251  3e-65  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0173671 
 
 
-
 
NC_007517  Gmet_2424  methyl-accepting chemotaxis sensory transducer  45.55 
 
 
581 aa  250  5e-65  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_1077  methyl-accepting chemotaxis sensory transducer  48.38 
 
 
690 aa  249  1e-64  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.317064  n/a   
 
 
-
 
NC_011769  DvMF_1209  methyl-accepting chemotaxis sensory transducer  40.49 
 
 
659 aa  248  2e-64  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.261932 
 
 
-
 
NC_011145  AnaeK_2477  methyl-accepting chemotaxis sensory transducer  51.59 
 
 
617 aa  248  3e-64  Anaeromyxobacter sp. K  Bacteria  normal  0.200364  n/a   
 
 
-
 
NC_008751  Dvul_1207  methyl-accepting chemotaxis sensory transducer  47.13 
 
 
720 aa  248  3e-64  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.149931 
 
 
-
 
NC_002939  GSU1294  methyl-accepting chemotaxis protein  55.11 
 
 
962 aa  247  4e-64  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1735  methyl-accepting chemotaxis sensory transducer  45.32 
 
 
868 aa  247  4e-64  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2573  methyl-accepting chemotaxis sensory transducer  51.41 
 
 
621 aa  246  6e-64  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.650368  n/a   
 
 
-
 
NC_009439  Pmen_1567  methyl-accepting chemotaxis sensory transducer  35.07 
 
 
547 aa  245  9.999999999999999e-64  Pseudomonas mendocina ymp  Bacteria  normal  0.0467505  normal 
 
 
-
 
NC_009483  Gura_1191  methyl-accepting chemotaxis sensory transducer  44.38 
 
 
846 aa  245  1.9999999999999999e-63  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1108  methyl-accepting chemotaxis sensory transducer  53.68 
 
 
685 aa  244  3e-63  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007005  Psyr_0785  histidine kinase, HAMP region: chemotaxis sensory transducer  34.43 
 
 
551 aa  243  9e-63  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.367078  normal 
 
 
-
 
NC_002939  GSU1140  methyl-accepting chemotaxis protein  46.46 
 
 
727 aa  242  1e-62  Geobacter sulfurreducens PCA  Bacteria  normal  0.664897  n/a   
 
 
-
 
NC_007760  Adeh_1380  methyl-accepting chemotaxis sensory transducer  52.21 
 
 
608 aa  242  1e-62  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.236828  n/a   
 
 
-
 
NC_011989  Avi_4313  methyl-accepting chemotaxis protein  53.99 
 
 
642 aa  242  1e-62  Agrobacterium vitis S4  Bacteria  normal  0.7654  n/a   
 
 
-
 
NC_011146  Gbem_2945  methyl-accepting chemotaxis sensory transducer  46.02 
 
 
780 aa  242  1e-62  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3065  methyl-accepting chemotaxis sensory transducer  48.42 
 
 
524 aa  241  2e-62  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.60396 
 
 
-
 
NC_008751  Dvul_2361  methyl-accepting chemotaxis sensory transducer  50.5 
 
 
652 aa  241  2.9999999999999997e-62  Desulfovibrio vulgaris DP4  Bacteria  normal  0.128072  normal  0.188082 
 
 
-
 
NC_007517  Gmet_2423  methyl-accepting chemotaxis sensory transducer  47.96 
 
 
740 aa  240  4e-62  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_3837  methyl-accepting chemotaxis sensory transducer  45.17 
 
 
561 aa  240  4e-62  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.834659 
 
 
-
 
NC_011146  Gbem_2944  methyl-accepting chemotaxis sensory transducer  44.84 
 
 
780 aa  240  5e-62  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2942  methyl-accepting chemotaxis sensory transducer  45.54 
 
 
1049 aa  240  5.999999999999999e-62  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007494  RSP_3420  methyl-accepting chemotaxis protein  49.66 
 
 
524 aa  239  6.999999999999999e-62  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
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