More than 300 homologs were found in PanDaTox collection
for query gene Avi_4312 on replicon NC_011989
Organism: Agrobacterium vitis S4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011989  Avi_4312  methyl-accepting chemotaxis protein  100 
 
 
606 aa  1201    Agrobacterium vitis S4  Bacteria  normal  0.623028  n/a   
 
 
-
 
NC_012850  Rleg_3559  methyl-accepting chemotaxis sensory transducer  59.81 
 
 
602 aa  608  9.999999999999999e-173  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.495549  normal  0.432808 
 
 
-
 
NC_011369  Rleg2_3261  methyl-accepting chemotaxis sensory transducer  55.88 
 
 
640 aa  592  1e-168  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.444549 
 
 
-
 
NC_012850  Rleg_3560  methyl-accepting chemotaxis sensory transducer  54.95 
 
 
640 aa  587  1e-166  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.521589  normal  0.347271 
 
 
-
 
NC_011989  Avi_4313  methyl-accepting chemotaxis protein  59.85 
 
 
642 aa  587  1e-166  Agrobacterium vitis S4  Bacteria  normal  0.7654  n/a   
 
 
-
 
NC_011369  Rleg2_3260  methyl-accepting chemotaxis sensory transducer  58.72 
 
 
602 aa  583  1.0000000000000001e-165  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0582253  normal  0.204929 
 
 
-
 
NC_011989  Avi_4314  methyl-accepting chemotaxis protein  60.76 
 
 
564 aa  574  1.0000000000000001e-162  Agrobacterium vitis S4  Bacteria  normal  0.77703  n/a   
 
 
-
 
NC_007643  Rru_A1404  chemotaxis sensory transducer  53.27 
 
 
611 aa  526  1e-148  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.011031  n/a   
 
 
-
 
NC_010338  Caul_0615  methyl-accepting chemotaxis sensory transducer  57 
 
 
599 aa  516  1.0000000000000001e-145  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_011981  Avi_7320  methyl-accepting chemotaxis protein  75.45 
 
 
774 aa  503  1e-141  Agrobacterium vitis S4  Bacteria  normal  0.364364  n/a   
 
 
-
 
NC_010338  Caul_0614  methyl-accepting chemotaxis sensory transducer  53.45 
 
 
560 aa  501  1e-140  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3561  methyl-accepting chemotaxis sensory transducer  53.15 
 
 
569 aa  495  9.999999999999999e-139  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.216373 
 
 
-
 
NC_011369  Rleg2_3262  methyl-accepting chemotaxis sensory transducer  52.91 
 
 
569 aa  489  1e-137  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.846629 
 
 
-
 
NC_007643  Rru_A1403  methyl-accepting chemotaxis sensory transducer  47.89 
 
 
637 aa  491  1e-137  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4673  methyl-accepting chemotaxis sensory transducer  47.86 
 
 
640 aa  471  1.0000000000000001e-131  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6733  putative methyl-accepting chemotaxis protein  58.16 
 
 
738 aa  459  9.999999999999999e-129  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.556647  normal 
 
 
-
 
NC_009485  BBta_7836  methyl-accepting chemotaxis receptor (MCP)  49.19 
 
 
609 aa  452  1.0000000000000001e-126  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.518607  normal  0.95176 
 
 
-
 
NC_009485  BBta_6734  methyl-accepting chemotaxis receptor (MCP)  47.57 
 
 
650 aa  450  1e-125  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.221073  normal 
 
 
-
 
NC_007643  Rru_A1401  chemotaxis sensory transducer  47.23 
 
 
569 aa  445  1e-123  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4674  methyl-accepting chemotaxis sensory transducer  62.59 
 
 
734 aa  436  1e-121  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0142  methyl-accepting chemotaxis sensory transducer  64.96 
 
 
733 aa  428  1e-118  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.134985  n/a   
 
 
-
 
NC_011989  Avi_3947  methyl-accepting chemotaxis protein  67.12 
 
 
619 aa  413  1e-114  Agrobacterium vitis S4  Bacteria  normal  0.412994  n/a   
 
 
-
 
NC_010505  Mrad2831_4817  methyl-accepting chemotaxis sensory transducer  61.26 
 
 
747 aa  413  1e-114  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.00849638 
 
 
-
 
NC_009485  BBta_6735  methyl-accepting chemotaxis receptor (MCP)  49.18 
 
 
566 aa  408  1.0000000000000001e-112  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0787905  normal 
 
 
-
 
NC_010510  Mrad2831_5777  methyl-accepting chemotaxis sensory transducer  49.4 
 
 
705 aa  397  1e-109  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.807181  normal  0.137814 
 
 
-
 
NC_007925  RPC_4672  methyl-accepting chemotaxis sensory transducer  57.08 
 
 
693 aa  370  1e-101  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4671  methyl-accepting chemotaxis sensory transducer  57.04 
 
 
691 aa  369  1e-100  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7837  putative methyl-accepting chemotaxis protein (MCP)  55.21 
 
 
702 aa  353  4e-96  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_1601  methyl-accepting chemotaxis sensory transducer  53.68 
 
 
1500 aa  353  4e-96  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2647  methyl-accepting chemotaxis sensory transducer  57.43 
 
 
554 aa  352  2e-95  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.910941  n/a   
 
 
-
 
NC_013173  Dbac_1421  methyl-accepting chemotaxis sensory transducer  58.03 
 
 
676 aa  349  8e-95  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.45919  n/a   
 
 
-
 
NC_010814  Glov_1735  methyl-accepting chemotaxis sensory transducer  53.42 
 
 
868 aa  349  8e-95  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1917  methyl-accepting chemotaxis sensory transducer  58.07 
 
 
677 aa  347  3e-94  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.134066  n/a   
 
 
-
 
NC_008609  Ppro_1608  methyl-accepting chemotaxis sensory transducer  54.87 
 
 
558 aa  345  2e-93  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1140  methyl-accepting chemotaxis protein  55.26 
 
 
727 aa  344  2.9999999999999997e-93  Geobacter sulfurreducens PCA  Bacteria  normal  0.664897  n/a   
 
 
-
 
NC_007760  Adeh_1380  methyl-accepting chemotaxis sensory transducer  42.05 
 
 
608 aa  341  2e-92  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.236828  n/a   
 
 
-
 
NC_011145  AnaeK_2477  methyl-accepting chemotaxis sensory transducer  42.45 
 
 
617 aa  340  4e-92  Anaeromyxobacter sp. K  Bacteria  normal  0.200364  n/a   
 
 
-
 
NC_011891  A2cp1_2573  methyl-accepting chemotaxis sensory transducer  42.29 
 
 
621 aa  339  9.999999999999999e-92  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.650368  n/a   
 
 
-
 
NC_009483  Gura_2779  methyl-accepting chemotaxis sensory transducer  42.09 
 
 
566 aa  338  1.9999999999999998e-91  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_1046  methyl-accepting chemotaxis sensory transducer  39.5 
 
 
551 aa  335  1e-90  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3708  methyl accepting chemotaxis protein  41.96 
 
 
553 aa  333  6e-90  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2985  methyl-accepting chemotaxis sensory transducer  64.47 
 
 
576 aa  333  8e-90  Geobacter uraniireducens Rf4  Bacteria  normal  0.293775  n/a   
 
 
-
 
NC_009050  Rsph17029_3443  methyl-accepting chemotaxis sensory transducer  41.45 
 
 
553 aa  332  9e-90  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0628443 
 
 
-
 
NC_012918  GM21_1294  methyl-accepting chemotaxis sensory transducer  57.91 
 
 
686 aa  332  1e-89  Geobacter sp. M21  Bacteria  n/a    hitchhiker  4.66893e-19 
 
 
-
 
NC_002939  GSU0683  methyl-accepting chemotaxis protein, putative  41.52 
 
 
568 aa  331  2e-89  Geobacter sulfurreducens PCA  Bacteria  normal  0.268569  n/a   
 
 
-
 
NC_010814  Glov_1733  methyl-accepting chemotaxis sensory transducer  57.99 
 
 
823 aa  330  3e-89  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3251  hypothetical protein  39.62 
 
 
552 aa  330  6e-89  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.367816  normal  0.217501 
 
 
-
 
NC_002939  GSU1304  methyl-accepting chemotaxis protein  60.12 
 
 
566 aa  329  1.0000000000000001e-88  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007494  RSP_3083  methyl accepting chemotaxis protein  40.42 
 
 
561 aa  328  1.0000000000000001e-88  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.481742  n/a   
 
 
-
 
NC_002939  GSU1300  methyl-accepting chemotaxis protein  62.81 
 
 
563 aa  328  2.0000000000000001e-88  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2710  methyl-accepting chemotaxis sensory transducer  49.39 
 
 
969 aa  328  3e-88  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3810  methyl-accepting chemotaxis sensory transducer  40.07 
 
 
561 aa  326  6e-88  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.296432 
 
 
-
 
NC_007517  Gmet_2422  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  64.83 
 
 
1046 aa  325  1e-87  Geobacter metallireducens GS-15  Bacteria  normal  0.925436  normal 
 
 
-
 
NC_007517  Gmet_2424  methyl-accepting chemotaxis sensory transducer  58.82 
 
 
581 aa  325  1e-87  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1298  methyl-accepting chemotaxis protein  67.36 
 
 
568 aa  324  2e-87  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2772  methyl-accepting chemotaxis sensory transducer  53.46 
 
 
735 aa  324  4e-87  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_012918  GM21_1105  methyl-accepting chemotaxis sensory transducer  42.28 
 
 
563 aa  322  9.999999999999999e-87  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1482  methyl-accepting chemotaxis sensory transducer  55.24 
 
 
735 aa  322  1.9999999999999998e-86  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2361  methyl-accepting chemotaxis sensory transducer  62.23 
 
 
652 aa  317  4e-85  Desulfovibrio vulgaris DP4  Bacteria  normal  0.128072  normal  0.188082 
 
 
-
 
NC_002939  GSU1294  methyl-accepting chemotaxis protein  65.94 
 
 
962 aa  316  7e-85  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2847  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  60.24 
 
 
1089 aa  315  9.999999999999999e-85  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.000851175  n/a   
 
 
-
 
NC_012918  GM21_0950  methyl-accepting chemotaxis sensory transducer  61.86 
 
 
546 aa  314  2.9999999999999996e-84  Geobacter sp. M21  Bacteria  n/a    normal  0.187483 
 
 
-
 
NC_007517  Gmet_2423  methyl-accepting chemotaxis sensory transducer  50.57 
 
 
740 aa  314  3.9999999999999997e-84  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1209  methyl-accepting chemotaxis sensory transducer  40.96 
 
 
659 aa  313  5.999999999999999e-84  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.261932 
 
 
-
 
NC_012918  GM21_1366  methyl-accepting chemotaxis sensory transducer with Cache sensor  58.91 
 
 
1088 aa  311  1e-83  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000517956 
 
 
-
 
NC_009483  Gura_2989  methyl-accepting chemotaxis sensory transducer  67.38 
 
 
1093 aa  311  2e-83  Geobacter uraniireducens Rf4  Bacteria  normal  0.653084  n/a   
 
 
-
 
NC_008751  Dvul_1207  methyl-accepting chemotaxis sensory transducer  45.31 
 
 
720 aa  310  5.9999999999999995e-83  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.149931 
 
 
-
 
NC_012918  GM21_1108  methyl-accepting chemotaxis sensory transducer  58.7 
 
 
685 aa  310  6.999999999999999e-83  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU1303  methyl-accepting chemotaxis protein  61.13 
 
 
494 aa  309  9e-83  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0621  methyl-accepting chemotaxis sensory transducer  44.59 
 
 
727 aa  308  1.0000000000000001e-82  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0173671 
 
 
-
 
NC_011146  Gbem_2944  methyl-accepting chemotaxis sensory transducer  53.64 
 
 
780 aa  309  1.0000000000000001e-82  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_2442  methyl accepting chemotaxis protein, McpB  38.36 
 
 
560 aa  309  1.0000000000000001e-82  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.648609  n/a   
 
 
-
 
NC_009049  Rsph17029_1106  methyl-accepting chemotaxis sensory transducer  38.36 
 
 
560 aa  309  1.0000000000000001e-82  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.809659 
 
 
-
 
NC_011146  Gbem_2945  methyl-accepting chemotaxis sensory transducer  54.18 
 
 
780 aa  308  2.0000000000000002e-82  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0949  methyl-accepting chemotaxis sensory transducer  63.1 
 
 
554 aa  307  3e-82  Geobacter sp. M21  Bacteria  n/a    normal  0.0219131 
 
 
-
 
NC_012918  GM21_1280  methyl-accepting chemotaxis sensory transducer  51.83 
 
 
1048 aa  306  7e-82  Geobacter sp. M21  Bacteria  n/a    normal  0.0818053 
 
 
-
 
NC_009483  Gura_2992  methyl-accepting chemotaxis sensory transducer  51.67 
 
 
733 aa  306  9.000000000000001e-82  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1077  methyl-accepting chemotaxis sensory transducer  51.54 
 
 
690 aa  304  4.0000000000000003e-81  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.317064  n/a   
 
 
-
 
NC_011146  Gbem_2942  methyl-accepting chemotaxis sensory transducer  51.44 
 
 
1049 aa  303  8.000000000000001e-81  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1191  methyl-accepting chemotaxis sensory transducer  56.37 
 
 
846 aa  302  1e-80  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3891  hypothetical protein  51.12 
 
 
551 aa  301  2e-80  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.452082 
 
 
-
 
NC_009431  Rsph17025_4246  hypothetical protein  51.31 
 
 
562 aa  299  1e-79  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.2464  normal  0.120296 
 
 
-
 
NC_011769  DvMF_2542  methyl-accepting chemotaxis sensory transducer  56.08 
 
 
597 aa  298  2e-79  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_3297  methyl-accepting chemotaxis sensory transducer  62.59 
 
 
548 aa  296  6e-79  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_2401  methyl-accepting chemotaxis sensory transducer  58.74 
 
 
674 aa  295  2e-78  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.0000495749  normal  0.0928318 
 
 
-
 
NC_008576  Mmc1_3308  methyl-accepting chemotaxis sensory transducer  54.04 
 
 
682 aa  291  2e-77  Magnetococcus sp. MC-1  Bacteria  normal  0.785168  normal 
 
 
-
 
NC_007760  Adeh_3897  methyl-accepting chemotaxis sensory transducer  50.47 
 
 
551 aa  291  3e-77  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.198365  n/a   
 
 
-
 
NC_007519  Dde_1627  methyl-accepting chemotaxis sensory transducer  55.05 
 
 
733 aa  290  6e-77  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.426202  n/a   
 
 
-
 
NC_011146  Gbem_3298  methyl-accepting chemotaxis sensory transducer  62.28 
 
 
553 aa  288  2e-76  Geobacter bemidjiensis Bem  Bacteria  normal  0.62981  n/a   
 
 
-
 
NC_011891  A2cp1_4039  methyl-accepting chemotaxis sensory transducer  52.58 
 
 
551 aa  286  8e-76  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3998  methyl-accepting chemotaxis sensory transducer  52.58 
 
 
550 aa  286  1.0000000000000001e-75  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1826  methyl-accepting chemotaxis sensory transducer  55.35 
 
 
835 aa  281  3e-74  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_4036  methyl-accepting chemotaxis sensory transducer  36.58 
 
 
534 aa  280  5e-74  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3303  putative methyl accepting chemotaxis protein, McpG  36.56 
 
 
534 aa  280  5e-74  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.627808  n/a   
 
 
-
 
NC_012918  GM21_2421  methyl-accepting chemotaxis sensory transducer  54.03 
 
 
816 aa  280  5e-74  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008576  Mmc1_0628  methyl-accepting chemotaxis sensory transducer  52.26 
 
 
675 aa  280  6e-74  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0902  methyl-accepting chemotaxis sensory transducer  49.37 
 
 
550 aa  279  8e-74  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0912  methyl-accepting chemotaxis protein  46.15 
 
 
551 aa  279  1e-73  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3297  chemotaxis sensory transducer  48.08 
 
 
543 aa  271  2.9999999999999997e-71  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2159  methyl-accepting chemotaxis sensory transducer  54.23 
 
 
561 aa  270  5e-71  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.182871  n/a   
 
 
-
 
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