| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4312 |
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| Symbol | |
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| ID | 7386553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3625028 |
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| End bp | 3626848 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643652969 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_002551140 |
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| Protein GI | 222150183 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.623028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATTCA CGATCAAACT AAAACTGGCC CTTGCCTTTG GCCTTATCAT CCTGATGTCA
GGCGCCATGG CAACGATGGC GATCATCAAC CTTTCGTCAC TCAATAGTGC GATCAGTGAC
ATCATCGCTG GTCCCGCAGC GAATTTGCGT AATTCAAGCG ATTTGTCGGA TGCTGTCTTG
TCTTCGATCC GCGATGAGAA AAACGCCATC ATCAATGTGG ACCCAAACAA GATTGATGAA
TATGTCGGCG GCGTGAAAGA GCGCCGTGCG CTTATCAATG ATCTCCTGGT GAAACTGGAT
GCGGACACCA ATCCGTTGAT CAAGGAAAAA GTCGCGCAAT TCCGGACCCA CTTGCCCGGT
TGGATCACCA TGCAGGATTC CATCCTCAAG CTTGCCATCG AGAATACGGA TGCCAGCAAC
AAGCAGGCGG GTGAAATTTC CATGGGCGAT GGTGCCAAGC TGACAGCAAG CCTGTTGCAA
AGTCTGGGTG CCCTAAACGG ACAGATTTCC GCGGATCTCA AGCAGACCGA TGAAGCCACC
AACGAGCAAT ATGACTTCTC CCGCAATAGT CTGATTGCCG GCTTGGTTAC CTTGCTGGTT
CTGTCGATTG CTATTGCTGC GTGGATTGCC ATGGGCATCA ATTCCGGCCT GAAAAAGATC
AAGGCCGTTG CAGATGCCGT TGCTATCGGC GATCTCGGTC AGGATATCGA GATCAGGACC
AATGATGAAA TCCGCGATGT CGTCGATAGC GTCAAGATCA TGACCGGCAA TCTCAGGGAA
ACGGCAGCTG TCGCCAATCA GATTGCCGAT GGCAATTTGA CGGTGGCGCC GAAATCCCTG
TCCGATAAGG ACACGCTTGG CCAGTCTCTT CAGTTGATGG TTGAGCGCCT TCGCGGCGTG
GTCGCTGATG CCTTGTCGGC ATCCGACAAT GTGTCTTCGG GTAGCCAGCA GCTGTCGTCT
GCCTCCGAGC AGGTCAGCCA GGGCGCGACG GAACAGGCAT CGTCTGCCGA AGAAGCCTCC
GCCTCGATGG AAGAGATGGC GGCCAATATC AAGCAGAATG CCGACAATGC CGCCCAGACG
GAAAAGATTG CCCGCCAGTC CTCCAAGGAT GCGGAAGCCT CTGGCGAAGC TGTGAACCGG
GCTGTCGGTG CGATGCGCAC GATTGCCGAG AAGATCTCGA TCGTCCAGGA AATCGCTCGT
CAGACCGACC TTCTGGCCTT GAATGCGGCG GTTGAAGCGG CCCGTGCGGG TGAGCATGGC
AAGGGCTTTG CAGTGGTTGC TTCTGAAGTG CGCAAGCTTG CCGAACGCAG CCAGGCGGCA
GCGGCTGAAA TCAGCACGCT ATCGGGCCAG ACGGTACAGG TGGCAACGGA AGCCGGTGAA
ATGCTGACGC GGCTTGTTCC TGACATCAGA AAGACGGCGG AATTGATTTC CGAGATCTCG
GCGGCTTGCC GTGAGCAGGA TATCGGCGCC AGCCAGATCA ACGAAGCGAT CCAGCAGCTC
GACAAGGTGA CGCAGCAGAA TGCGGGTGCC TCGGAAGAAA TGTCGGCAAC CTCTGAAGAA
CTGGCTGCTC AGGCCGAGGA ACTGCAAACC TCCATCGCCT TCTTCAAGGT CGATGGTGCG
CATCAGAAGA AGCCTGCACC ACAGACCCGG ACTGTTGCTG CTCGCGCAGC GCCAGCCCGG
ACGGCTGCAC CGGCAAAACC CCGTACACCG ACGTCGTCTC AGACGGTTGC TGCCCAGCAG
GCGAGAGCCA AGGGCTTTGC CCTCGATCTC TCCATGGGCG GTCCGGATGA GGAGGATCGC
CTCTTTCAGG AAAGCGCGTA A
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| Protein sequence | MRFTIKLKLA LAFGLIILMS GAMATMAIIN LSSLNSAISD IIAGPAANLR NSSDLSDAVL
SSIRDEKNAI INVDPNKIDE YVGGVKERRA LINDLLVKLD ADTNPLIKEK VAQFRTHLPG
WITMQDSILK LAIENTDASN KQAGEISMGD GAKLTASLLQ SLGALNGQIS ADLKQTDEAT
NEQYDFSRNS LIAGLVTLLV LSIAIAAWIA MGINSGLKKI KAVADAVAIG DLGQDIEIRT
NDEIRDVVDS VKIMTGNLRE TAAVANQIAD GNLTVAPKSL SDKDTLGQSL QLMVERLRGV
VADALSASDN VSSGSQQLSS ASEQVSQGAT EQASSAEEAS ASMEEMAANI KQNADNAAQT
EKIARQSSKD AEASGEAVNR AVGAMRTIAE KISIVQEIAR QTDLLALNAA VEAARAGEHG
KGFAVVASEV RKLAERSQAA AAEISTLSGQ TVQVATEAGE MLTRLVPDIR KTAELISEIS
AACREQDIGA SQINEAIQQL DKVTQQNAGA SEEMSATSEE LAAQAEELQT SIAFFKVDGA
HQKKPAPQTR TVAARAAPAR TAAPAKPRTP TSSQTVAAQQ ARAKGFALDL SMGGPDEEDR
LFQESA
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