More than 300 homologs were found in PanDaTox collection
for query gene Gbem_3297 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012918  GM21_0950  methyl-accepting chemotaxis sensory transducer  89.25 
 
 
546 aa  936    Geobacter sp. M21  Bacteria  n/a    normal  0.187483 
 
 
-
 
NC_011146  Gbem_3297  methyl-accepting chemotaxis sensory transducer  100 
 
 
548 aa  1116    Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0949  methyl-accepting chemotaxis sensory transducer  84.64 
 
 
554 aa  524  1e-147  Geobacter sp. M21  Bacteria  n/a    normal  0.0219131 
 
 
-
 
NC_011146  Gbem_3298  methyl-accepting chemotaxis sensory transducer  81.72 
 
 
553 aa  499  1e-140  Geobacter bemidjiensis Bem  Bacteria  normal  0.62981  n/a   
 
 
-
 
NC_009483  Gura_2985  methyl-accepting chemotaxis sensory transducer  53.51 
 
 
576 aa  466  9.999999999999999e-131  Geobacter uraniireducens Rf4  Bacteria  normal  0.293775  n/a   
 
 
-
 
NC_009483  Gura_2779  methyl-accepting chemotaxis sensory transducer  50.25 
 
 
566 aa  457  1e-127  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1105  methyl-accepting chemotaxis sensory transducer  51.13 
 
 
563 aa  444  1e-123  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU1298  methyl-accepting chemotaxis protein  50.68 
 
 
568 aa  413  1e-114  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1608  methyl-accepting chemotaxis sensory transducer  61.19 
 
 
558 aa  409  1e-113  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1421  methyl-accepting chemotaxis sensory transducer  60.05 
 
 
676 aa  405  1e-111  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.45919  n/a   
 
 
-
 
NC_013173  Dbac_2647  methyl-accepting chemotaxis sensory transducer  44.48 
 
 
554 aa  403  1e-111  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.910941  n/a   
 
 
-
 
NC_002939  GSU1300  methyl-accepting chemotaxis protein  65.51 
 
 
563 aa  399  9.999999999999999e-111  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1917  methyl-accepting chemotaxis sensory transducer  62.22 
 
 
677 aa  401  9.999999999999999e-111  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.134066  n/a   
 
 
-
 
NC_002939  GSU1304  methyl-accepting chemotaxis protein  47.26 
 
 
566 aa  398  1e-109  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2424  methyl-accepting chemotaxis sensory transducer  48.4 
 
 
581 aa  395  1e-108  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1303  methyl-accepting chemotaxis protein  57.81 
 
 
494 aa  391  1e-107  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0683  methyl-accepting chemotaxis protein, putative  46.86 
 
 
568 aa  383  1e-105  Geobacter sulfurreducens PCA  Bacteria  normal  0.268569  n/a   
 
 
-
 
NC_011891  A2cp1_2573  methyl-accepting chemotaxis sensory transducer  43.12 
 
 
621 aa  378  1e-103  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.650368  n/a   
 
 
-
 
NC_011145  AnaeK_2477  methyl-accepting chemotaxis sensory transducer  42.73 
 
 
617 aa  371  1e-101  Anaeromyxobacter sp. K  Bacteria  normal  0.200364  n/a   
 
 
-
 
NC_011146  Gbem_1482  methyl-accepting chemotaxis sensory transducer  63.56 
 
 
735 aa  365  1e-99  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2989  methyl-accepting chemotaxis sensory transducer  67.23 
 
 
1093 aa  365  1e-99  Geobacter uraniireducens Rf4  Bacteria  normal  0.653084  n/a   
 
 
-
 
NC_012918  GM21_2772  methyl-accepting chemotaxis sensory transducer  66.26 
 
 
735 aa  364  2e-99  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007760  Adeh_1380  methyl-accepting chemotaxis sensory transducer  42.11 
 
 
608 aa  364  2e-99  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.236828  n/a   
 
 
-
 
NC_007517  Gmet_2422  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  69.87 
 
 
1046 aa  360  3e-98  Geobacter metallireducens GS-15  Bacteria  normal  0.925436  normal 
 
 
-
 
NC_012918  GM21_1294  methyl-accepting chemotaxis sensory transducer  61.76 
 
 
686 aa  360  3e-98  Geobacter sp. M21  Bacteria  n/a    hitchhiker  4.66893e-19 
 
 
-
 
NC_008609  Ppro_1601  methyl-accepting chemotaxis sensory transducer  65.57 
 
 
1500 aa  360  3e-98  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2542  methyl-accepting chemotaxis sensory transducer  56 
 
 
597 aa  353  2.9999999999999997e-96  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_2992  methyl-accepting chemotaxis sensory transducer  69.46 
 
 
733 aa  349  7e-95  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2710  methyl-accepting chemotaxis sensory transducer  67.36 
 
 
969 aa  349  7e-95  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1077  methyl-accepting chemotaxis sensory transducer  55.27 
 
 
690 aa  348  1e-94  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.317064  n/a   
 
 
-
 
NC_002939  GSU1140  methyl-accepting chemotaxis protein  65.43 
 
 
727 aa  344  2.9999999999999997e-93  Geobacter sulfurreducens PCA  Bacteria  normal  0.664897  n/a   
 
 
-
 
NC_011369  Rleg2_3262  methyl-accepting chemotaxis sensory transducer  61.16 
 
 
569 aa  342  7e-93  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.846629 
 
 
-
 
NC_007005  Psyr_0785  histidine kinase, HAMP region: chemotaxis sensory transducer  42.56 
 
 
551 aa  341  2e-92  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.367078  normal 
 
 
-
 
NC_008576  Mmc1_2401  methyl-accepting chemotaxis sensory transducer  49.76 
 
 
674 aa  341  2e-92  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.0000495749  normal  0.0928318 
 
 
-
 
NC_012918  GM21_1366  methyl-accepting chemotaxis sensory transducer with Cache sensor  63.64 
 
 
1088 aa  340  2.9999999999999998e-92  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000517956 
 
 
-
 
NC_002939  GSU1294  methyl-accepting chemotaxis protein  62.17 
 
 
962 aa  340  5e-92  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2945  methyl-accepting chemotaxis sensory transducer  63.8 
 
 
780 aa  338  9.999999999999999e-92  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0912  methyl-accepting chemotaxis protein  41.19 
 
 
551 aa  337  1.9999999999999998e-91  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007494  RSP_3708  methyl accepting chemotaxis protein  42.44 
 
 
553 aa  337  1.9999999999999998e-91  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1191  methyl-accepting chemotaxis sensory transducer  57.85 
 
 
846 aa  337  2.9999999999999997e-91  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0902  methyl-accepting chemotaxis sensory transducer  51.77 
 
 
550 aa  337  2.9999999999999997e-91  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_4314  methyl-accepting chemotaxis protein  60.06 
 
 
564 aa  337  3.9999999999999995e-91  Agrobacterium vitis S4  Bacteria  normal  0.77703  n/a   
 
 
-
 
NC_012918  GM21_1280  methyl-accepting chemotaxis sensory transducer  62.99 
 
 
1048 aa  337  5e-91  Geobacter sp. M21  Bacteria  n/a    normal  0.0818053 
 
 
-
 
NC_010510  Mrad2831_5777  methyl-accepting chemotaxis sensory transducer  58.52 
 
 
705 aa  335  1e-90  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.807181  normal  0.137814 
 
 
-
 
NC_011146  Gbem_2944  methyl-accepting chemotaxis sensory transducer  62.28 
 
 
780 aa  334  2e-90  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3561  methyl-accepting chemotaxis sensory transducer  45.86 
 
 
569 aa  333  4e-90  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.216373 
 
 
-
 
NC_010814  Glov_1735  methyl-accepting chemotaxis sensory transducer  64.05 
 
 
868 aa  333  4e-90  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2423  methyl-accepting chemotaxis sensory transducer  68.77 
 
 
740 aa  333  6e-90  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_1046  methyl-accepting chemotaxis sensory transducer  50.66 
 
 
551 aa  332  7.000000000000001e-90  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_0628  methyl-accepting chemotaxis sensory transducer  55.63 
 
 
675 aa  332  8e-90  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_1108  methyl-accepting chemotaxis sensory transducer  60.66 
 
 
685 aa  332  1e-89  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009050  Rsph17029_3443  methyl-accepting chemotaxis sensory transducer  43.37 
 
 
553 aa  331  2e-89  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0628443 
 
 
-
 
NC_011146  Gbem_2942  methyl-accepting chemotaxis sensory transducer  62.16 
 
 
1049 aa  330  3e-89  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2847  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  62.82 
 
 
1089 aa  330  4e-89  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.000851175  n/a   
 
 
-
 
NC_008751  Dvul_2361  methyl-accepting chemotaxis sensory transducer  61.33 
 
 
652 aa  330  4e-89  Desulfovibrio vulgaris DP4  Bacteria  normal  0.128072  normal  0.188082 
 
 
-
 
NC_011769  DvMF_1209  methyl-accepting chemotaxis sensory transducer  55.65 
 
 
659 aa  328  1.0000000000000001e-88  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.261932 
 
 
-
 
NC_007298  Daro_1143  histidine kinase, HAMP region: chemotaxis sensory transducer  40.75 
 
 
541 aa  328  1.0000000000000001e-88  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1567  methyl-accepting chemotaxis sensory transducer  39.78 
 
 
547 aa  328  1.0000000000000001e-88  Pseudomonas mendocina ymp  Bacteria  normal  0.0467505  normal 
 
 
-
 
NC_010814  Glov_1733  methyl-accepting chemotaxis sensory transducer  68.36 
 
 
823 aa  327  3e-88  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3560  methyl-accepting chemotaxis sensory transducer  60.44 
 
 
640 aa  326  7e-88  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.521589  normal  0.347271 
 
 
-
 
NC_007643  Rru_A1401  chemotaxis sensory transducer  52.04 
 
 
569 aa  326  7e-88  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3261  methyl-accepting chemotaxis sensory transducer  59.81 
 
 
640 aa  325  9e-88  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.444549 
 
 
-
 
NC_007925  RPC_4671  methyl-accepting chemotaxis sensory transducer  52.59 
 
 
691 aa  324  3e-87  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6735  methyl-accepting chemotaxis receptor (MCP)  61.22 
 
 
566 aa  323  4e-87  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0787905  normal 
 
 
-
 
NC_007760  Adeh_3897  methyl-accepting chemotaxis sensory transducer  53.87 
 
 
551 aa  323  4e-87  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.198365  n/a   
 
 
-
 
NC_010338  Caul_0614  methyl-accepting chemotaxis sensory transducer  43.3 
 
 
560 aa  322  9.000000000000001e-87  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_3998  methyl-accepting chemotaxis sensory transducer  54.78 
 
 
550 aa  322  9.000000000000001e-87  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4039  methyl-accepting chemotaxis sensory transducer  54.78 
 
 
551 aa  322  9.999999999999999e-87  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3251  hypothetical protein  55.13 
 
 
552 aa  322  9.999999999999999e-87  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.367816  normal  0.217501 
 
 
-
 
NC_009943  Dole_2000  methyl-accepting chemotaxis sensory transducer  55.29 
 
 
559 aa  320  5e-86  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.25845  n/a   
 
 
-
 
NC_007925  RPC_4672  methyl-accepting chemotaxis sensory transducer  59.55 
 
 
693 aa  320  5e-86  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3308  methyl-accepting chemotaxis sensory transducer  51.97 
 
 
682 aa  319  7e-86  Magnetococcus sp. MC-1  Bacteria  normal  0.785168  normal 
 
 
-
 
NC_007494  RSP_3083  methyl accepting chemotaxis protein  49.57 
 
 
561 aa  318  2e-85  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.481742  n/a   
 
 
-
 
NC_009050  Rsph17029_3810  methyl-accepting chemotaxis sensory transducer  37.66 
 
 
561 aa  318  2e-85  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.296432 
 
 
-
 
NC_007643  Rru_A1404  chemotaxis sensory transducer  50.39 
 
 
611 aa  317  4e-85  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.011031  n/a   
 
 
-
 
NC_011989  Avi_4312  methyl-accepting chemotaxis protein  62.59 
 
 
606 aa  316  7e-85  Agrobacterium vitis S4  Bacteria  normal  0.623028  n/a   
 
 
-
 
NC_009429  Rsph17025_3891  hypothetical protein  39.01 
 
 
551 aa  315  9.999999999999999e-85  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.452082 
 
 
-
 
NC_011769  DvMF_0621  methyl-accepting chemotaxis sensory transducer  60.44 
 
 
727 aa  315  9.999999999999999e-85  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0173671 
 
 
-
 
NC_011981  Avi_7320  methyl-accepting chemotaxis protein  60.31 
 
 
774 aa  315  1.9999999999999998e-84  Agrobacterium vitis S4  Bacteria  normal  0.364364  n/a   
 
 
-
 
NC_007643  Rru_A1403  methyl-accepting chemotaxis sensory transducer  58.07 
 
 
637 aa  315  1.9999999999999998e-84  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1207  methyl-accepting chemotaxis sensory transducer  53.12 
 
 
720 aa  315  1.9999999999999998e-84  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.149931 
 
 
-
 
NC_009675  Anae109_3837  methyl-accepting chemotaxis sensory transducer  52.17 
 
 
561 aa  315  1.9999999999999998e-84  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.834659 
 
 
-
 
NC_009431  Rsph17025_4246  hypothetical protein  41.37 
 
 
562 aa  311  2.9999999999999997e-83  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.2464  normal  0.120296 
 
 
-
 
NC_007925  RPC_4674  methyl-accepting chemotaxis sensory transducer  54.52 
 
 
734 aa  310  5e-83  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_0872  methyl-accepting chemotaxis sensory transducer  60.06 
 
 
685 aa  310  5e-83  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2421  methyl-accepting chemotaxis sensory transducer  55.71 
 
 
816 aa  306  5.0000000000000004e-82  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007954  Sden_3297  chemotaxis sensory transducer  51.31 
 
 
543 aa  306  5.0000000000000004e-82  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1160  methyl-accepting chemotaxis sensory transducer  51.27 
 
 
532 aa  306  7e-82  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1762  methyl-accepting chemotaxis sensory transducer  46.73 
 
 
553 aa  305  1.0000000000000001e-81  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007494  RSP_3303  putative methyl accepting chemotaxis protein, McpG  37.64 
 
 
534 aa  305  1.0000000000000001e-81  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.627808  n/a   
 
 
-
 
NC_011146  Gbem_1826  methyl-accepting chemotaxis sensory transducer  57.1 
 
 
835 aa  305  1.0000000000000001e-81  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1691  methyl-accepting chemotaxis sensory transducer  46.73 
 
 
553 aa  305  1.0000000000000001e-81  Anaeromyxobacter sp. K  Bacteria  normal  0.302444  n/a   
 
 
-
 
NC_009485  BBta_7837  putative methyl-accepting chemotaxis protein (MCP)  55.31 
 
 
702 aa  304  3.0000000000000004e-81  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_3947  methyl-accepting chemotaxis protein  53.07 
 
 
619 aa  303  6.000000000000001e-81  Agrobacterium vitis S4  Bacteria  normal  0.412994  n/a   
 
 
-
 
NC_009050  Rsph17029_4036  methyl-accepting chemotaxis sensory transducer  43.02 
 
 
534 aa  301  1e-80  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_3671  methyl-accepting chemotaxis sensory transducer  52.88 
 
 
509 aa  302  1e-80  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.353813  n/a   
 
 
-
 
NC_010505  Mrad2831_4817  methyl-accepting chemotaxis sensory transducer  53.01 
 
 
747 aa  301  2e-80  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.00849638 
 
 
-
 
NC_011004  Rpal_0142  methyl-accepting chemotaxis sensory transducer  61.38 
 
 
733 aa  301  2e-80  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.134985  n/a   
 
 
-
 
NC_007925  RPC_4673  methyl-accepting chemotaxis sensory transducer  53.94 
 
 
640 aa  301  2e-80  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0615  methyl-accepting chemotaxis sensory transducer  60.66 
 
 
599 aa  301  2e-80  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
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